Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016442_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:5:162540701:162548042:1 gene:Zm00001d016442 gene_biotype:protein_coding transcript_biotype:protein_coding description:drought-induced 19
Sequence

ATGGATTCCGACCTCTGGATCTCGCGTCTCACGGCCGCCAAGCGGCAGTTTGCGCTGCAG
CGCGCGCAGCGCCAGCACGCCGCCCCGGCATCCCATCACGATCGATTTGGGTATGATGAT
ATCGAACCTGAGGATGATTTGCACTCAGACTTCCCATGCCCTTACTGTTATGAAGATCAT
GATGTTGCTTCTCTCTGCGCCCATTTGGAGGACGAGCACCCTTTCGAGTCTAAAATTGTG
AAACATCAAAGAGTACGCAGAGTTACTGGTAATGGCAACCACAATCTCTCCTATGCAGGG
AGAGATCTTCAACTGCAAGAGACCTACTTAAAGGTGCTTCTTGGAAATAGCAGTCGAAGC
AGCAGTACCAATGCATCAAGTACAGTCACCGATTCACTGCTACCCTCACTAGTTTTAAAT
TTATCATCACCAGAAGTAGAAGACGCATCAAAGTTTTCAGCTCCTGCTGTGGTGGAAAAT
AATTGGTTTAAACGATCACTGCCTTCAAAAACTTGGAAATTAAGAACTGTTGATTCCACC
CTTAGTCATGAAGAGAGGGAGCGTAGGAGGAGGAGAGCTGCTGTGAGATCAGCTTTTGTC
CAGCATCTCCTTGTCACCACCATTTTTGAAGACTAG

Peptide Sequence

PEP ID

Zm00001d016442_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:5:162540701:162548042:1 gene:Zm00001d016442 transcript:Zm00001d016442_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:drought-induced 19
Sequence

MDSDLWISRLTAAKRQFALQRAQRQHAAPASHHDRFGYDDIEPEDDLHSDFPCPYCYEDH
DVASLCAHLEDEHPFESKIVKHQRVRRVTGNGNHNLSYAGRDLQLQETYLKVLLGNSSRS
SSTNASSTVTDSLLPSLVLNLSSPEVEDASKFSAPAVVENNWFKRSLPSKTWKLRTVDST
LSHEERERRRRRAAVRSAFVQHLLVTTIFED

Transcript Sequence

Transcript ID

Zm00001d016442_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:162540701:162548042:1 gene:Zm00001d016442 gene_biotype:protein_coding transcript_biotype:protein_coding description:drought-induced 19
Sequence

ACCGTGCGGAGGGGGAAGAGGGAGAGGCCAGGAGAGGAAAGCCTGCAGCCACCATGGATT
CCGACCTCTGGATCTCGCGTCTCACGGCCGCCAAGCGGCAGTTTGCGCTGCAGCGCGCGC
AGCGCCAGCACGCCGCCCCGGCATCCCATCACGATCGATTTGGGTATGATGATATCGAAC
CTGAGGATGATTTGCACTCAGACTTCCCATGCCCTTACTGTTATGAAGATCATGATGTTG
CTTCTCTCTGCGCCCATTTGGAGGACGAGCACCCTTTCGAGTCTAAAATTGTGAAACATC
AAAGAGTACGCAGAGTTACTGGTAATGGCAACCACAATCTCTCCTATGCAGGGAGAGATC
TTCAACTGCAAGAGACCTACTTAAAGGTGCTTCTTGGAAATAGCAGTCGAAGCAGCAGTA
CCAATGCATCAAGTACAGTCACCGATTCACTGCTACCCTCACTAGTTTTAAATTTATCAT
CACCAGAAGTAGAAGACGCATCAAAGTTTTCAGCTCCTGCTGTGGTGGAAAATAATTGGT
TTAAACGATCACTGCCTTCAAAAACTTGGAAATTAAGAACTGTTGATTCCACCCTTAGTC
ATGAAGAGAGGGAGCGTAGGAGGAGGAGAGCTGCTGTGAGATCAGCTTTTGTCCAGCATC
TCCTTGTCACCACCATTTTTGAAGACTAGCAGATCAAGCACAGCTCATGCAAAGGAATCT
TGTGGGCGGGCCTTTTGCCCACTCATTTATCTGGATGGATAAGGCACTAATTATCTTGGA
TACCATCACGCTGTTCATCCGGTCTGCTGGGTAACCATGACAGGAAAAATGAAGCAGCGG
GCGTCTTACCTTATATATGTTCTCTGGAAGCAGCTGACATTTGTTTTCTGGATCATATTC
ATAATTCTATGTAGGCTGTGACAGGAATCTCTATAGTAGAGCCATGATTTTTTTTTGGTT
GGGTTTCAGCCTGCGTTGGAGAATATGCCCAATTTTTTTTTTTGGAGAATATGCCTTATC
TGGATGGATAAGGCACTAAACATTTGAAGATTATATTTCGGAGGGTGGAGAATATGACAA
TTTGATTTATATCACTAAACATTTGAAGATTATGTTTCGGAGTTTGGTACTTGTTTCTTC
TTAATATTCTTAATATAATGATGTGTGTTTCTTTGG