Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016402_T082
CDS Infomation

cds chromosome:B73_RefGen_v4:5:161087916:161094457:1 gene:Zm00001d016402 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

ATGTGTACAAATGACTTCATTTGCTTTTATGATTGGGTGGAATGCAGATTGATACGTCGA
ATTGATGTCAATGTGAAGAATCTTTACTGGGCTGACAGTGGTGATTTAGTAACAATTGCA
AGTGATACGTCATTCTACATTTTGAAATATAATAGGGATGTAGTTTCATCTCATTTAGAC
GGAGGGGGTTCAGCTGCTGAGGAAGGTGTGGAAGATGCCTTTGAACTGCTTCATGAGATC
AATGAACGTGTCCGGACTGGGCTATGGGTTGGCGATTGTTTTATCTACAACAATTCTTCG
TGGCGGCTTAATTACTGCGTAGGAGGAGAGGTTACAACCTTATTTCACTTGGATCGGCCA
ATGTATTTACTAGGATATCTTGCAAACCAAAGCCGTGTCTATCTTATTGATAAGCAATTT
AATGTTGTGGGGTATACTTTACTCCTTAGTTTGATCGAGTATAAAACACTTGTAATGCGT
GGGGATTTTGATCGTGCAAATGATGTTTTATCATCTATACCAAAGGAACAATATGACAGT
GTGGCACGTTTCTTGGAATCACGTGGAATGTTGGAGGAAGCCCTCGAGATAGCAACTGAC
ACTAATTACAGATTTGACCTGGCTGTGCAGCTTGGTCGACTTGAAATAGCGAAGGTGATT
GCTACTGAGGTGCAAAGTGAATCCAAGTGGAAGCAATTAGGGGAGTTAGCTATGTCAAAT
GGAAAGCTTGAAATGGCAGAGGAGTGTCTTCTACATGCAATGGACCTCAGTGGTTTGTTG
CTTTTGTATTCTTCCCTTGGGGATGCCGAAGGCATTAACAAATTGGCATCTGTAGCCAAA
GAACAAGGAAAGAACAATGTTTCTTTCCTTTGTTTCTTCATGCTAGGAAAGCTGGAAGAG
TGTCTTCAATTGCTAATAGAAAGCAATCGTATTCCGGAAGCAGCATTGATGGCCAGATCT
TATCTTCCTAGCAAAGTCCCTGAGATTGTAGCGTTGTGGAAAAAGGATCTCCAGAAGGTA
AACCCAAAAGCAGCGGAGTCCCTGGCTGATCCTAATGAGTACCCAAACTTATTTGAAGAC
TGGCAGATTGCTCTGAATGTAGAAGCTGCTGTTGCTCCGAAAAGGGTTATCTATCCACCG
GCTGAGGAGTACATGATTCATGCTGAAAGGTCAAATGAGAATTTAGTGGAAGCTTTTAAA
AACATGCATGTACAGGAAGAGATGGTGCCAGATGATAATGAAGAGTATGTTCACGAGGTT
ATTGAAGATGGTGGAGTAGAAGAGAGTCAAGAAGATGCTGTTGAGGTTGATGCAGAGGAT
GATGGAGTAGAAGAAAGTCAGGATGAAGCTGTTGAGGTTGAGGCTGAGGATTCAACTGAT
GGTGCTGTCCTTGTGAATGGAAACAATAGTGAGGAACAGTGGGTGCTGACTCCTGAGCAA
TAG

Peptide Sequence

PEP ID

Zm00001d016402_P082
PEP Infomation

pep chromosome:B73_RefGen_v4:5:161087916:161094457:1 gene:Zm00001d016402 transcript:Zm00001d016402_T082 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

MCTNDFICFYDWVECRLIRRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDVVSSHLD
GGGSAAEEGVEDAFELLHEINERVRTGLWVGDCFIYNNSSWRLNYCVGGEVTTLFHLDRP
MYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVMRGDFDRANDVLSSIPKEQYDS
VARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKVIATEVQSESKWKQLGELAMSN
GKLEMAEECLLHAMDLSGLLLLYSSLGDAEGINKLASVAKEQGKNNVSFLCFFMLGKLEE
CLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQKVNPKAAESLADPNEYPNLFED
WQIALNVEAAVAPKRVIYPPAEEYMIHAERSNENLVEAFKNMHVQEEMVPDDNEEYVHEV
IEDGGVEESQEDAVEVDAEDDGVEESQDEAVEVEAEDSTDGAVLVNGNNSEEQWVLTPEQ

Transcript Sequence

Transcript ID

Zm00001d016402_T082
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:161087916:161094457:1 gene:Zm00001d016402 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer subunit beta'-3
Sequence

TTAGATCGCAGATGGTGATCGGTTACCATTGGCCGTGAAGGAGTTGGGAAGCTGTGATCT
TTATCCACAAAGCTTAAGACACAATCCGAATGGGAGATTTGTTGTTGTATGTGGAGATGG
AGAATACATAATATACACAGCATTAGCATGGAGAAATAGATCATTTGGGTCTGCACTTGA
ATTTGTTTGGTCAACTGATGGAGAATATGCCATCAGAGAAAGCACCTCAAGGATAAAGAT
TTACAGTAAAAATTTCCAGGAGAGGAAAAGTATAAGACCATCATTTTCGGTTGAACGGAT
ATTTGGTGGTGTGTTACTTGCTATGTGTACAAATGACTTCATTTGCTTTTATGATTGGGT
GGAATGCAGATTGATACGTCGAATTGATGTCAATGTGAAGAATCTTTACTGGGCTGACAG
TGGTGATTTAGTAACAATTGCAAGTGATACGTCATTCTACATTTTGAAATATAATAGGGA
TGTAGTTTCATCTCATTTAGACGGAGGGGGTTCAGCTGCTGAGGAAGGTGTGGAAGATGC
CTTTGAACTGCTTCATGAGATCAATGAACGTGTCCGGACTGGGCTATGGGTTGGCGATTG
TTTTATCTACAACAATTCTTCGTGGCGGCTTAATTACTGCGTAGGAGGAGAGGTTACAAC
CTTATTTCACTTGGATCGGCCAATGTATTTACTAGGATATCTTGCAAACCAAAGCCGTGT
CTATCTTATTGATAAGCAATTTAATGTTGTGGGGTATACTTTACTCCTTAGTTTGATCGA
GTATAAAACACTTGTAATGCGTGGGGATTTTGATCGTGCAAATGATGTTTTATCATCTAT
ACCAAAGGAACAATATGACAGTGTGGCACGTTTCTTGGAATCACGTGGAATGTTGGAGGA
AGCCCTCGAGATAGCAACTGACACTAATTACAGATTTGACCTGGCTGTGCAGCTTGGTCG
ACTTGAAATAGCGAAGGTGATTGCTACTGAGGTGCAAAGTGAATCCAAGTGGAAGCAATT
AGGGGAGTTAGCTATGTCAAATGGAAAGCTTGAAATGGCAGAGGAGTGTCTTCTACATGC
AATGGACCTCAGTGGTTTGTTGCTTTTGTATTCTTCCCTTGGGGATGCCGAAGGCATTAA
CAAATTGGCATCTGTAGCCAAAGAACAAGGAAAGAACAATGTTTCTTTCCTTTGTTTCTT
CATGCTAGGAAAGCTGGAAGAGTGTCTTCAATTGCTAATAGAAAGCAATCGTATTCCGGA
AGCAGCATTGATGGCCAGATCTTATCTTCCTAGCAAAGTCCCTGAGATTGTAGCGTTGTG
GAAAAAGGATCTCCAGAAGGTAAACCCAAAAGCAGCGGAGTCCCTGGCTGATCCTAATGA
GTACCCAAACTTATTTGAAGACTGGCAGATTGCTCTGAATGTAGAAGCTGCTGTTGCTCC
GAAAAGGGTTATCTATCCACCGGCTGAGGAGTACATGATTCATGCTGAAAGGTCAAATGA
GAATTTAGTGGAAGCTTTTAAAAACATGCATGTACAGGAAGAGATGGTGCCAGATGATAA
TGAAGAGTATGTTCACGAGGTTATTGAAGATGGTGGAGTAGAAGAGAGTCAAGAAGATGC
TGTTGAGGTTGATGCAGAGGATGATGGAGTAGAAGAAAGTCAGGATGAAGCTGTTGAGGT
TGAGGCTGAGGATTCAACTGATGGTGCTGTCCTTGTGAATGGAAACAATAGTGAGGAACA
GTGGGTGCTGACTCCTGAGCAATAGTGGATCAACGGGACAGCAACTTTGCAAGTGGTTAA
GTTTGTAAAGGTTGCTGACTGCTTTCTAGAGTACGAAGTCCATTTTCTCCAGCAGTATTA
AGCATGAGACGTGCTCTAGGATTGGCTTATCCACATACGAAGTTGGACCACAATTAATCA
AAACTTCATCATTGTGCTCGATAGGAAATTTTGTGCTTCCTTTTTTACATATAGATCAGG
TCTTTAGGTCTCAGAAAACTTCATCAAAAGTACTCTTGTTTCACCGAGATGGAAATATGG
GATGTGATTGGTGATCGGAGTGGTATTTTTACAAGGTACATAGAGTAGTAGCTTGTGGAA
TTGAGGATGTTTTACATGTGATGTACATCGGACTTGGGAGCTTTGTATCAACAGCATACG
TTTT