Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016374_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:159956880:159962674:-1 gene:Zm00001d016374 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1R

Sequence

ATGCCGCCGGCGCCGCCACCGCAACAACCTAAGAATCGCAGCCGTGTTCCCACGCCGACC
GGAGAGAACCGTCGGCCTCAGCGTCGGATGGAGAGCCGGAACGCGTCGGAGCGGGCCGCG
TTCTTCGCGCGGCGAGAGGCAGCGGCGGTGCTCCGGCGCGTGCTTCGCGGGGACGCCACC
AGGCGCGCCGCCGGCTCCATAAAATCCCTTGTATACTCCCCAACCGTCCGCAACAAGCGC
GCCACCTTCGCTCTCGTCTGCCAGACCCTCAAGTACCTACCAATTCTTAAAGAGGTTTTA
GCATCGAGTGAAATACTGAGCAGCAAATGGAAGAAACAAGAGGAATTGGTTTATGTGACT
ACCTATGACATTCTCTTTGGTCAGGGAATTGCGGTTTCTGGGTCAGTCGAGCAATTAATT
ATGCTACAAAAGGATTCTCTTAGGACTACTCTTGATAAAGTTTGTGCGAGAAAGAGAGTC
CGCTGCGTTGAAGACCTATTGAGCAATAAATCAGCCGTCAAACCAAAGCCCCGATTTCTT
CGTGTTAACACACTCAAGGTCACTACAGAGTCTGTCATTGAAGAATTGAACAAAATGCAC
ATGGTTGACAAAGATGAAATGGTTCCAGATATGTTGGTACTCCCACCTGGAACTGATTTG
CATAACCATCCGTTGGTTACAGATGGGAAAGTGTTTTTACAGGGGAGAGCTAGTTGTATG
GTAGCAGTTGCATTGTGCCCTAAGCCAGGCTGGAAGGTTATTGATGCATGTGCGGCTCCA
GGGAACAAAACAGTCCACCTTGCTGCACTCATGAATGGAGAGGGGAGTATTATAGCTTGT
GAACTTAACAAAGAGAGGGCCAAGACATTGCAACATACTGTCAGAAGATCTGGAGCAAAC
AATATTCGAATAGTTAATGGCGACTTTCTGGAAGTAGATAGAAATGATCCATCATATGCT
GAGGTCCATGCTATTCTATTGGACCCCTCGTGCTCTGGTTCTGGAATATCTACAGAGAGA
CTTGATTATTTGCTTCCCTCACATTCTAGAGATAGTCAGGATGATGCGGGTACAAGCTCA
AGGGTCATGAAACTCTCCGCTTTTCAGAAGAAAGCTCTCTCCCATGCTCTATCATTTCCG
TCAGTGGAGAGGGTGGTCTACAGTACTTGCTCAATCCACCAGGCAGAGAACGAGGATGTC
ATAAACTCTGTCTTGCCCTTAGCTACATCCCTCGGATTTGAGCTCGCTACACCGTTCCCT
CAGTGGCACCGCCGTGGCCTTCCAGTTTTCCAAGGATCTGAACATTTGCTTCGGACGGAT
CCTGAAGATGGCCTGGAGGGCTTCTTCATTGCATTGTTTGTCAGGAAAGCAGGCCCTACT
TCAGAAGAGCCTAGCGAAGATGCCACGGTAGAAGTAAGAACCAAACAAGTGCGCGGGAGG
CGAAATGGGGTCAGGGCGTTCAGCTCCTTGAGGCTGTCCAGGATGATCCTCTGGTGA

Peptide Sequence

PEP ID

Zm00001d016374_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:159956880:159962674:-1 gene:Zm00001d016374 transcript:Zm00001d016374_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1R

Sequence

MPPAPPPQQPKNRSRVPTPTGENRRPQRRMESRNASERAAFFARREAAAVLRRVLRGDAT
RRAAGSIKSLVYSPTVRNKRATFALVCQTLKYLPILKEVLASSEILSSKWKKQEELVYVT
TYDILFGQGIAVSGSVEQLIMLQKDSLRTTLDKVCARKRVRCVEDLLSNKSAVKPKPRFL
RVNTLKVTTESVIEELNKMHMVDKDEMVPDMLVLPPGTDLHNHPLVTDGKVFLQGRASCM
VAVALCPKPGWKVIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRRSGAN
NIRIVNGDFLEVDRNDPSYAEVHAILLDPSCSGSGISTERLDYLLPSHSRDSQDDAGTSS
RVMKLSAFQKKALSHALSFPSVERVVYSTCSIHQAENEDVINSVLPLATSLGFELATPFP
QWHRRGLPVFQGSEHLLRTDPEDGLEGFFIALFVRKAGPTSEEPSEDATVEVRTKQVRGR
RNGVRAFSSLRLSRMILW

Transcript Sequence

Transcript ID

Zm00001d016374_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:159956880:159962674:-1 gene:Zm00001d016374 gene_biotype:protein_coding transcript_biotype:protein_coding description:NOL1R

Sequence

GAGCGCCAAAAACAGAAAAAACCCCTGAACTCCGAAGACGGGCAGGGCAGGCACCATTGG
CATCAGCCATGCCGCCGGCGCCGCCACCGCAACAACCTAAGAATCGCAGCCGTGTTCCCA
CGCCGACCGGAGAGAACCGTCGGCCTCAGCGTCGGATGGAGAGCCGGAACGCGTCGGAGC
GGGCCGCGTTCTTCGCGCGGCGAGAGGCAGCGGCGGTGCTCCGGCGCGTGCTTCGCGGGG
ACGCCACCAGGCGCGCCGCCGGCTCCATAAAATCCCTTGTATACTCCCCAACCGTCCGCA
ACAAGCGCGCCACCTTCGCTCTCGTCTGCCAGACCCTCAAGTACCTACCAATTCTTAAAG
AGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGAAACAAGAGGAATTGGTTT
ATGTGACTACCTATGACATTCTCTTTGGTCAGGGAATTGCGGTTTCTGGGTCAGTCGAGC
AATTAATTATGCTACAAAAGGATTCTCTTAGGACTACTCTTGATAAAGTTTGTGCGAGAA
AGAGAGTCCGCTGCGTTGAAGACCTATTGAGCAATAAATCAGCCGTCAAACCAAAGCCCC
GATTTCTTCGTGTTAACACACTCAAGGTCACTACAGAGTCTGTCATTGAAGAATTGAACA
AAATGCACATGGTTGACAAAGATGAAATGGTTCCAGATATGTTGGTACTCCCACCTGGAA
CTGATTTGCATAACCATCCGTTGGTTACAGATGGGAAAGTGTTTTTACAGGGGAGAGCTA
GTTGTATGGTAGCAGTTGCATTGTGCCCTAAGCCAGGCTGGAAGGTTATTGATGCATGTG
CGGCTCCAGGGAACAAAACAGTCCACCTTGCTGCACTCATGAATGGAGAGGGGAGTATTA
TAGCTTGTGAACTTAACAAAGAGAGGGCCAAGACATTGCAACATACTGTCAGAAGATCTG
GAGCAAACAATATTCGAATAGTTAATGGCGACTTTCTGGAAGTAGATAGAAATGATCCAT
CATATGCTGAGGTCCATGCTATTCTATTGGACCCCTCGTGCTCTGGTTCTGGAATATCTA
CAGAGAGACTTGATTATTTGCTTCCCTCACATTCTAGAGATAGTCAGGATGATGCGGGTA
CAAGCTCAAGGGTCATGAAACTCTCCGCTTTTCAGAAGAAAGCTCTCTCCCATGCTCTAT
CATTTCCGTCAGTGGAGAGGGTGGTCTACAGTACTTGCTCAATCCACCAGGCAGAGAACG
AGGATGTCATAAACTCTGTCTTGCCCTTAGCTACATCCCTCGGATTTGAGCTCGCTACAC
CGTTCCCTCAGTGGCACCGCCGTGGCCTTCCAGTTTTCCAAGGATCTGAACATTTGCTTC
GGACGGATCCTGAAGATGGCCTGGAGGGCTTCTTCATTGCATTGTTTGTCAGGAAAGCAG
GCCCTACTTCAGAAGAGCCTAGCGAAGATGCCACGGTAGAAGTAAGAACCAAACAAGTGC
GCGGGAGGCGAAATGGGGTCAGGGCGTTCAGCTCCTTGAGGCTGTCCAGGATGATCCTCT
GGTGACCAAAGGCGTTCTGGATTTAATTTGATGTATCATTGCTATTTTTGGTAGTCAATG
TGGTAACAGGTAGGTTTGAATCTGTTCTGAATTTTGGACTCATTTTTTTCTTCTACTCCA
GATAATATGTTGCCATACTCCATGTCCATTTCAGATTATAAGACATTTTAGCTAATATAT
ATATATATATATATATATATATTTGTCATCGAAGGTGATGTACCAA