Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016351_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:158826378:158830529:-1 gene:Zm00001d016351 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G028366 description:Eukaryotic initiation factor 4A-2
Sequence	ATGCTGAAAGATGAACTCAAGAAGCTTTGGAACCTTCCTGGCGATTGGGAGTTAAGGAGA GAATGCAGTACGACTTTCCTGGCCTCCTTCAGCTCGGAGGATGACCTAACAAGTTGTTTA AAGAACCCTGAGATCCAAACATTACTGGATAACAAGGAGGTGAAATTGACTGTAACGAGG TGGAATGAAAGCGACGATGGAAGCCCTGGCTTGGTTGAAGAGTGGCTTTTAGTGTCTGGG GTCCCAAGAATGTATAGAAACTGGAAGGAGCTATATGAGGTTGCTTCTGCACTTGGTGTG CTGATCGACGTCGATGAGGAAAGTTTGCAAGTCGGAGATAAGGAGCCTATTAGGCTGAAG CTGAAGACAGCATTCAGGAGTTTTGATGCTGCTCCCTTTTCTTACTACTTTGCATTTGGA TGTTGGTCGTCAAGACTAGTAATGGTCACAGCAGTACAAGACAAAACACAAGGTATGGAA CATAAAATTAAGGAGTTAGACTGCAAGGAGCATAAAAAGGAACTGAATGTGGCAAAAAGT ATAATGCTGGAAGAGCCGAATAGCACTGAAGAATCAAGATCAAATGGAAAGGCCAAAGTA AACAAAATAAGTGCTCCAGCAGCCACAATAACAGACTCTGAGGTAATAGCAGCAATAGAA AGTTCAAAACCTGAAGGGGTGCAATCCATAGCCCAAAGTCCACGAAGCATGACTGGAGAA GAGAACTTCAGAGGTATACAAAAACCGCCTATCAAACATGTATTCAAAAGAAGAGGTAAG AAACAGCCAGTTACTACTGAAGCAATAAACAAGAGCCCGTCAAATAAAATGGATAAAGAA GTGGCTCCACATAGCCAGAGTAATGCCACAAGAACTGGAGCTTCAACTGGGTGTGATATG CTGGATCAAAAGGAATGCTCAAAAATGGAACCCAAGAGGGAACTGAATATGGAAGGAATA ACCCCAGCAGGGGAAAGTAAAAAGGCCGAAAAGATTGGAGCATGCAGAAATTCTGAATAC AGTAAGGTAGCGTCCTCTACAATCAAGTCAAAGAAGACACAAATATTAGGAGACACATCA AGAGCTCCGAGAGATGAGTTGATCACTAAATATCCCAAAGGTGACGGGATGGATCAAATG GGATCAAGCGCCCAAGGTGACGAAAAAGAAGATGCATCCATAATAGACACAGGGCTACTT CCAAATTCCGAGGAAGTTGGTGTCTATGACAGTTTCAGTGAGATGGGTCTTCAGGAGAAT CTACTCAAGGGAATATATCAATATGGTCTGGAGAAGCCTTCCGCGGTCCACCAAAGAGGA ATCGTCCCACTATGCAAGGGCTTTGATGTGCTCCATCGATCTCTGTCTGGAACAACTGAG ACGATCTGCTCCGGCGTACTTCAGCGAGTTGACTACGGATCTGCAGAATGCCAGGCTTTG ATCCTTGTACCGACACCCGACTTGGCACAAGAGACTCTGAAAGTTCTTGAGGCACTTGGT GAGTTCCTTGGTGTTACAGCTCAAACTTGCACAGGAGGAACTAGTGCCCATGCAGACCAG CAAGCCCTGCTAAGTGGAGCTCAGGTTCTAGTTGGCACCCCTGATTGCATTCTTGACATG TTGCAAAAGCATGCAGTATGCCCAGACCATGTTAGAATGCTTTTCTTGGATGAAGCAGAT GAACTACTCACAGGAGGTTCCAAGGATCAGATCTATAAGATCATCGTGCATCTCCCAGAC AAGATTCAGGTTGGGCTCTTCTCCGCTACCTACTCCACCGAAGCTATAGAGAGCAGCCGC AGACTCATGGATAAGCCCGTGGCGGTCATTGTCCCGAGAGACGAAGAGCTAAAGAACGTC AAGCAGTACTATCTGGCAGTCGAAAACGAAGGACTGAAGCTACGAAAACTGTTGGCTCTT TTCAAGACCACAGGGACGGAGCAGCTCGTCATCTTCGCGAACACGCGGGACAAGGTGCTG TCCCTCGCAGAAGACGTCGGCAAGCGTTACGCCGTCTCGGCAAGCCATGACGGCATGGAC CAGCGCGCCAGGGACGCGGCCGTCCAGAAGTTCAGGTCTGGGTCGTCCAGCATCCTCATC GCCACTGACCACGGAGGCACCACCAACGCGATGCCGCAGGTTCCCATCATCATCAACTAT GATCTTCCGACAGAGTCCATGCGGTACGTCCGTCGTCTCCAGCAGCAGAACAGGCAGTTC AGGAGGTCGGTCAGTGTGGCCATCAGTTTCGTGACTCCTGCTGACCGACGCACCCTCTCC GCCATCACGAGCTTTTGCAAGTGCTACATGGGGGAGCTGCCCACCGACTTGAAATGA

Peptide Sequence

PEP ID	Zm00001d016351_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:158826378:158830529:-1 gene:Zm00001d016351 transcript:Zm00001d016351_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G028366 description:Eukaryotic initiation factor 4A-2
Sequence	MLKDELKKLWNLPGDWELRRECSTTFLASFSSEDDLTSCLKNPEIQTLLDNKEVKLTVTR WNESDDGSPGLVEEWLLVSGVPRMYRNWKELYEVASALGVLIDVDEESLQVGDKEPIRLK LKTAFRSFDAAPFSYYFAFGCWSSRLVMVTAVQDKTQGMEHKIKELDCKEHKKELNVAKS IMLEEPNSTEESRSNGKAKVNKISAPAATITDSEVIAAIESSKPEGVQSIAQSPRSMTGE ENFRGIQKPPIKHVFKRRGKKQPVTTEAINKSPSNKMDKEVAPHSQSNATRTGASTGCDM LDQKECSKMEPKRELNMEGITPAGESKKAEKIGACRNSEYSKVASSTIKSKKTQILGDTS RAPRDELITKYPKGDGMDQMGSSAQGDEKEDASIIDTGLLPNSEEVGVYDSFSEMGLQEN LLKGIYQYGLEKPSAVHQRGIVPLCKGFDVLHRSLSGTTETICSGVLQRVDYGSAECQAL ILVPTPDLAQETLKVLEALGEFLGVTAQTCTGGTSAHADQQALLSGAQVLVGTPDCILDM LQKHAVCPDHVRMLFLDEADELLTGGSKDQIYKIIVHLPDKIQVGLFSATYSTEAIESSR RLMDKPVAVIVPRDEELKNVKQYYLAVENEGLKLRKLLALFKTTGTEQLVIFANTRDKVL SLAEDVGKRYAVSASHDGMDQRARDAAVQKFRSGSSSILIATDHGGTTNAMPQVPIIINY DLPTESMRYVRRLQQQNRQFRRSVSVAISFVTPADRRTLSAITSFCKCYMGELPTDLK

Transcript Sequence

Transcript ID	Zm00001d016351_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:158826378:158830529:-1 gene:Zm00001d016351 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G028366 description:Eukaryotic initiation factor 4A-2
Sequence	CTGGTTTCGGAGATGACTGACGCACGTGTTTCATCACAAGTTGTGGAAGATAGGGGCACT GAAAAGACTATGCCAGAAGAACAACTATCTGTTACTTTATCTGATGGAAAGGGGTGCTTT GCTTGCAATGAGAGATCACACAACTTGGAGCAGTGCAAGACAAAGTACAAACTTGTTCCT GCAGCACATCAATTTGGCTATGCTACAAAATTCCCATTCTTGCAAACTTGGACGAGAGTA TGCTGAAAGATGAACTCAAGAAGCTTTGGAACCTTCCTGGCGATTGGGAGTTAAGGAGAG AATGCAGTACGACTTTCCTGGCCTCCTTCAGCTCGGAGGATGACCTAACAAGTTGTTTAA AGAACCCTGAGATCCAAACATTACTGGATAACAAGGAGGTGAAATTGACTGTAACGAGGT GGAATGAAAGCGACGATGGAAGCCCTGGCTTGGTTGAAGAGTGGCTTTTAGTGTCTGGGG TCCCAAGAATGTATAGAAACTGGAAGGAGCTATATGAGGTTGCTTCTGCACTTGGTGTGC TGATCGACGTCGATGAGGAAAGTTTGCAAGTCGGAGATAAGGAGCCTATTAGGCTGAAGC TGAAGACAGCATTCAGGAGTTTTGATGCTGCTCCCTTTTCTTACTACTTTGCATTTGGAT GTTGGTCGTCAAGACTAGTAATGGTCACAGCAGTACAAGACAAAACACAAGGTATGGAAC ATAAAATTAAGGAGTTAGACTGCAAGGAGCATAAAAAGGAACTGAATGTGGCAAAAAGTA TAATGCTGGAAGAGCCGAATAGCACTGAAGAATCAAGATCAAATGGAAAGGCCAAAGTAA ACAAAATAAGTGCTCCAGCAGCCACAATAACAGACTCTGAGGTAATAGCAGCAATAGAAA GTTCAAAACCTGAAGGGGTGCAATCCATAGCCCAAAGTCCACGAAGCATGACTGGAGAAG AGAACTTCAGAGGTATACAAAAACCGCCTATCAAACATGTATTCAAAAGAAGAGGTAAGA AACAGCCAGTTACTACTGAAGCAATAAACAAGAGCCCGTCAAATAAAATGGATAAAGAAG TGGCTCCACATAGCCAGAGTAATGCCACAAGAACTGGAGCTTCAACTGGGTGTGATATGC TGGATCAAAAGGAATGCTCAAAAATGGAACCCAAGAGGGAACTGAATATGGAAGGAATAA CCCCAGCAGGGGAAAGTAAAAAGGCCGAAAAGATTGGAGCATGCAGAAATTCTGAATACA GTAAGGTAGCGTCCTCTACAATCAAGTCAAAGAAGACACAAATATTAGGAGACACATCAA GAGCTCCGAGAGATGAGTTGATCACTAAATATCCCAAAGGTGACGGGATGGATCAAATGG GATCAAGCGCCCAAGGTGACGAAAAAGAAGATGCATCCATAATAGACACAGGGCTACTTC CAAATTCCGAGGAAGTTGGTGTCTATGACAGTTTCAGTGAGATGGGTCTTCAGGAGAATC TACTCAAGGGAATATATCAATATGGTCTGGAGAAGCCTTCCGCGGTCCACCAAAGAGGAA TCGTCCCACTATGCAAGGGCTTTGATGTGCTCCATCGATCTCTGTCTGGAACAACTGAGA CGATCTGCTCCGGCGTACTTCAGCGAGTTGACTACGGATCTGCAGAATGCCAGGCTTTGA TCCTTGTACCGACACCCGACTTGGCACAAGAGACTCTGAAAGTTCTTGAGGCACTTGGTG AGTTCCTTGGTGTTACAGCTCAAACTTGCACAGGAGGAACTAGTGCCCATGCAGACCAGC AAGCCCTGCTAAGTGGAGCTCAGGTTCTAGTTGGCACCCCTGATTGCATTCTTGACATGT TGCAAAAGCATGCAGTATGCCCAGACCATGTTAGAATGCTTTTCTTGGATGAAGCAGATG AACTACTCACAGGAGGTTCCAAGGATCAGATCTATAAGATCATCGTGCATCTCCCAGACA AGATTCAGGTTGGGCTCTTCTCCGCTACCTACTCCACCGAAGCTATAGAGAGCAGCCGCA GACTCATGGATAAGCCCGTGGCGGTCATTGTCCCGAGAGACGAAGAGCTAAAGAACGTCA AGCAGTACTATCTGGCAGTCGAAAACGAAGGACTGAAGCTACGAAAACTGTTGGCTCTTT TCAAGACCACAGGGACGGAGCAGCTCGTCATCTTCGCGAACACGCGGGACAAGGTGCTGT CCCTCGCAGAAGACGTCGGCAAGCGTTACGCCGTCTCGGCAAGCCATGACGGCATGGACC AGCGCGCCAGGGACGCGGCCGTCCAGAAGTTCAGGTCTGGGTCGTCCAGCATCCTCATCG CCACTGACCACGGAGGCACCACCAACGCGATGCCGCAGGTTCCCATCATCATCAACTATG ATCTTCCGACAGAGTCCATGCGGTACGTCCGTCGTCTCCAGCAGCAGAACAGGCAGTTCA GGAGGTCGGTCAGTGTGGCCATCAGTTTCGTGACTCCTGCTGACCGACGCACCCTCTCCG CCATCACGAGCTTTTGCAAGTGCTACATGGGGGAGCTGCCCACCGACTTGAAATGACCGT ACCTCTTTGGTGAGCTATGGAATGCAGAAGTAGAACTGGTCAGCATGCATGCATGCACAG GTTCTTCTGGCTGCAAGGAAGCGGCATGCATGTTCGTTTCCTCTTGAGATACTTTGCGCT TGTTGAAATTTGAATACTCATGGAAGGTTTAACTTCCTATCACTCAGAACCTTGAGTTCC CCAGTATCTTATCTTTGATGTAATATTGTTATTTACTGGATGTGGTCGTTTGACAGTTGA ATGTTATATGATGACTTATCTTGTTTTT