Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016298_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:5:156109315:156112301:-1 gene:Zm00001d016298 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 2 description:Homeobox protein ATH1
Sequence	ATGGCGAGCGATCCGTCGACGTTCTCGCCAATCGGGGTGGACGCCATGGGCGGCGGCTAC TTCATGGCCGGCAGCAGCAGCTACGGAGGCGGCGGCATTATGAGCGCCGAGGTGCCGCAC TTCCACCACCCCGGCGTGCTTCTTGACCAGGGCGGCTTCGGGTTCGGCGGCCTCGGCAAC GCGGCGGTCGTCGGCGGCGCCGCGACGGCGGCGGATCTGGGCGCGCACTACGCGGCGAAC AACATCGTGCTGGCCTCCTTCGCCAGCCAGCTCCTCGCTAACGCCCCCGCGCCGCCGCGG GATGATCGTGCCGGCGGGAGGACGCCGCCGGACGAGATGGACGAAGAGCTGTACGGCGTC GCCGGCTGCGACAGCCGCGTCGCGGCGAGCTTGCGGTGCCCCAGCCAATCCGGGGCCATG GCGGTCTGGTCGTCGCCATCGTCGTCCAAGAAGCCGTACGGCATCTGGACCAGCGCCGGC GGACCAGCTCATGAACCATACCACCTCGCCGCGGCCGGGCTCTCCGACGCGGGAGGCCTC CGCTACCCGCTCGCCGCCTGCAGTGGCGGCAACGCGTCCGCGGCGGCGGCGAGCGAGCTG TCGCTGACTCTGTGCTCCAACTCCATCGCTTCCTCGGACAGCGCGCTGAACGCGACGGAG CAGTGCTCCTCGGGAGCGAGCCGGTCCGCCCTGACCGAGCTGCCGCGGGCGCGGTCCCGG ATGGCGCTGCACTTCGCCGCGGTGGTGGCGCGCTCGCGGTACGCGGCCGTGGTCCAGGAT TTGCTCAACGACGTCGTCGGCCACATGCTGGACGGCGTCGCCGACGTGACCGACGACTCG TGCAGCGGCATCGGCTCGGTTGGCGCGCCGTCCGCGGTGAGCTCCAACAGGTTCATGGCC TCGACCGAAGACGCCGGCGCGCGCTGGGGCCAGGCCCAGAGGGTCCGGAGCAACCTCCTC AAGACGCTTCAGCTGGTGACCATTCTTTTCATTCACGCTATTAATTTGCTACCCTGA

Peptide Sequence

PEP ID	Zm00001d016298_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:5:156109315:156112301:-1 gene:Zm00001d016298 transcript:Zm00001d016298_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 2 description:Homeobox protein ATH1
Sequence	MASDPSTFSPIGVDAMGGGYFMAGSSSYGGGGIMSAEVPHFHHPGVLLDQGGFGFGGLGN AAVVGGAATAADLGAHYAANNIVLASFASQLLANAPAPPRDDRAGGRTPPDEMDEELYGV AGCDSRVAASLRCPSQSGAMAVWSSPSSSKKPYGIWTSAGGPAHEPYHLAAAGLSDAGGL RYPLAACSGGNASAAAASELSLTLCSNSIASSDSALNATEQCSSGASRSALTELPRARSR MALHFAAVVARSRYAAVVQDLLNDVVGHMLDGVADVTDDSCSGIGSVGAPSAVSSNRFMA STEDAGARWGQAQRVRSNLLKTLQLVTILFIHAINLLP

Transcript Sequence

Transcript ID	Zm00001d016298_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:156109315:156112301:-1 gene:Zm00001d016298 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 2 description:Homeobox protein ATH1
Sequence	CATGCCAATGCCACGAGACCCTTTTGCGTTGCTCTCTCTCCCGCAGCAGTATATAGGATG GGCGCCAACGTCTAGCCATTGCTGCATCTGTTTGGGAGAAGCAAAGCAGGGTCCCTCCGT ATTTCCCATGGTTTTTGTGACTTGTGAGAGAGAACAAGGCCAAACACTGAAACACATCTC TGAAGTCTGAGCCCTGACCCAGCAGCGCCAAGATCCGGGACCGGGAGAGGGACCTGCTCC CTGGGGGGTGCCCTTTTTGAGGCGTGCTGAAATCACTACAAACTTTACAAGATTCCCCTA CAATGGCGAGCGATCCGTCGACGTTCTCGCCAATCGGGGTGGACGCCATGGGCGGCGGCT ACTTCATGGCCGGCAGCAGCAGCTACGGAGGCGGCGGCATTATGAGCGCCGAGGTGCCGC ACTTCCACCACCCCGGCGTGCTTCTTGACCAGGGCGGCTTCGGGTTCGGCGGCCTCGGCA ACGCGGCGGTCGTCGGCGGCGCCGCGACGGCGGCGGATCTGGGCGCGCACTACGCGGCGA ACAACATCGTGCTGGCCTCCTTCGCCAGCCAGCTCCTCGCTAACGCCCCCGCGCCGCCGC GGGATGATCGTGCCGGCGGGAGGACGCCGCCGGACGAGATGGACGAAGAGCTGTACGGCG TCGCCGGCTGCGACAGCCGCGTCGCGGCGAGCTTGCGGTGCCCCAGCCAATCCGGGGCCA TGGCGGTCTGGTCGTCGCCATCGTCGTCCAAGAAGCCGTACGGCATCTGGACCAGCGCCG GCGGACCAGCTCATGAACCATACCACCTCGCCGCGGCCGGGCTCTCCGACGCGGGAGGCC TCCGCTACCCGCTCGCCGCCTGCAGTGGCGGCAACGCGTCCGCGGCGGCGGCGAGCGAGC TGTCGCTGACTCTGTGCTCCAACTCCATCGCTTCCTCGGACAGCGCGCTGAACGCGACGG AGCAGTGCTCCTCGGGAGCGAGCCGGTCCGCCCTGACCGAGCTGCCGCGGGCGCGGTCCC GGATGGCGCTGCACTTCGCCGCGGTGGTGGCGCGCTCGCGGTACGCGGCCGTGGTCCAGG ATTTGCTCAACGACGTCGTCGGCCACATGCTGGACGGCGTCGCCGACGTGACCGACGACT CGTGCAGCGGCATCGGCTCGGTTGGCGCGCCGTCCGCGGTGAGCTCCAACAGGTTCATGG CCTCGACCGAAGACGCCGGCGCGCGCTGGGGCCAGGCCCAGAGGGTCCGGAGCAACCTCC TCAAGACGCTTCAGCTGGTGACCATTCTTTTCATTCACGCTATTAATTTGCTACCCTGAG GAATTCTGGAGAATATTTGTGAAGCATGTTGGAGTTGGACGATGGTTTGCAGATGGACGA GAAGTACAACCAGTGCTTGGACGAGATCCAGAGCACGACGGCCAGGTTCAACACCCTGAT GCACTCGCCCCCGGGCGGCGGCGGCGGCGGCGGCGGCATCTGCGCGCCGTTCGCGCACCG CGCCGTGTCGACGATGTACCGTGGGCTGAGGCGGCGGCTCGCCGGCGAGATCATGGCTGC GGCGAGCAGGGCCAGCTGCTGGGGCGAGTCGTCGTCGTCGGTGACGGTGGCCGCGGGCGG CGACGTGGAGCGGAGCTGGGAGTCGGCCTTCATACAGAAGCACTGGTCGGCGCAGCAGCT GCGGCGCACCGAGCAGCAGTGCTGGCGGCCCCAGCGCGGCCTGCCGGAGAAGTCCGTCGC CGTGCTCAAGGCGTGGATGTTCGAGAACTTCCTGCACCCGTATCCCAAGGACCATGAGAA GGACGTGCTGGCGGCAAGGAGCGGCCTCACCAGGAACCAGGTGTCGAATTGGTTCATAAA CGCGCGGGTTCGTCTATGGAAGCCGATGATCGAGGAGATGTACCAGGACCTCAAGAGGAG CTCGGGTGCAGGAGGAGGAGGGCACGGCCCGGCGATGGAGCCACAGCAGCACTTGAGCAA GCGTCGAATTTGCGAGCTGGAAGATGGTGGCCAGTGAACCATCCAGCTCCATAGCTGCCT GCCGTGGATTTACCATTGGCCCTTGTAGTTTCCCTGTGCTATGTTTATGTACATATCATT GCCAACGCCAGCATTT