Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016254_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:153614366:153620449:1 gene:Zm00001d016254 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase CCNB1IP1 homolog
Sequence

ATGAAGTGCAATGCTTGCTGGCGGGATTTGGAAGGGCAAGCTGTATCAACCACCTGTGGT
CATCTTTTATGTGCAGATGATGCTAGGAAAATACTCAATAATGATGGTACATGTCCAATT
TGTGATCAGGTGCTCTCAAAAAGCCATATGAAACCTATGGATATAAATCCAGGTGATGAT
TGGACAAATATGGCAATGGTTGGAATATCCCCACAAATACTTATGAAGAGTGCATACAGA
AGCGTAATGTTCTACATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGAACAGAATT
GTTGGTCAATGTAGGCAAAAATGTGAACTTATGCAGGCGAAATTTACTGAGAAACTGGAA
GAAGTACATACCGCATACCAGAAGATGGCGAAAAGATGTCAGTTGTTGGAGCAAGAGAAT
GAAAACTTGAACAGAGATAAGCACGAGCTGCAAGAAAAATTTGCTGAGAAATCCAGGCAG
AAGAGGAAGCTTGATGAGATGTATGACCAACTGAGGAATGAATATGAGTCGGTGAAGCGT
TCTGCCCTTCAACCTGCAAATAACTACTTAGCAAGACCTCAGCCAGACTTATTTGCAGGC
ATGCCCAACGTGATGGATGGTGGCGACCATCTGAGACAAGGATCGGTTGATCTTCCTAAA
ACTCCAGGGCAGAGAGATGAGGGCTGGGGTCCACCGCCAAGGCAACGTCACTGCACCTCT
GGTCCCTTTGATCTGTCCACCGGGTCTCCTGCCCATGCCGTGGCTCCTCCGGCTGATATC
AGGCCCAGACAGCAGACACGGTCAGTCTTCGGAGCTACACTGAACAATCCATCAAGCACC
CTGCGAAACCTCATAATCTCACCTGTCAAGCGTCCCCAGACGTCCCGTAATCGCCAACAC
ATATTCACGTAA

Peptide Sequence

PEP ID

Zm00001d016254_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:153614366:153620449:1 gene:Zm00001d016254 transcript:Zm00001d016254_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase CCNB1IP1 homolog
Sequence

MKCNACWRDLEGQAVSTTCGHLLCADDARKILNNDGTCPICDQVLSKSHMKPMDINPGDD
WTNMAMVGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLE
EVHTAYQKMAKRCQLLEQENENLNRDKHELQEKFAEKSRQKRKLDEMYDQLRNEYESVKR
SALQPANNYLARPQPDLFAGMPNVMDGGDHLRQGSVDLPKTPGQRDEGWGPPPRQRHCTS
GPFDLSTGSPAHAVAPPADIRPRQQTRSVFGATLNNPSSTLRNLIISPVKRPQTSRNRQH
IFT

Transcript Sequence

Transcript ID

Zm00001d016254_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:153614366:153620449:1 gene:Zm00001d016254 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase CCNB1IP1 homolog
Sequence

ATTCTCTTCTCACGAACGTTTACACGCCGGGTGCGCGCGCTCTGCTCTCCCTCCTTCCCT
TGCCCAACTCTCACTCTCTCGCCCGCGCGGCGCGGCCTTGCTTTCTGGTGGCACCGACTG
GCCGGCTGCCACCGTCTCCTCCTCGCTGGTGCCCAGGTCTTCGTCGGTCCCTTGGTGTCT
GCCCCTTATCCTGGTCTTTGTCAGGCCCTCGCCTTTCGCCCGCGACGAGCACCACCTGCA
GGAACAAAATGAAGTGCAATGCTTGCTGGCGGGATTTGGAAGGGCAAGCTGTATCAACCA
CCTGTGGTCATCTTTTATGTGCAGATGATGCTAGGAAAATACTCAATAATGATGGTACAT
GTCCAATTTGTGATCAGGTGCTCTCAAAAAGCCATATGAAACCTATGGATATAAATCCAG
GTGATGATTGGACAAATATGGCAATGGTTGGAATATCCCCACAAATACTTATGAAGAGTG
CATACAGAAGCGTAATGTTCTACATTGGACAAAAGGAACTGGAGATGCAGTACAAGATGA
ACAGAATTGTTGGTCAATGTAGGCAAAAATGTGAACTTATGCAGGCGAAATTTACTGAGA
AACTGGAAGAAGTACATACCGCATACCAGAAGATGGCGAAAAGATGTCAGTTGTTGGAGC
AAGAGAATGAAAACTTGAACAGAGATAAGCACGAGCTGCAAGAAAAATTTGCTGAGAAAT
CCAGGCAGAAGAGGAAGCTTGATGAGATGTATGACCAACTGAGGAATGAATATGAGTCGG
TGAAGCGTTCTGCCCTTCAACCTGCAAATAACTACTTAGCAAGACCTCAGCCAGACTTAT
TTGCAGGCATGCCCAACGTGATGGATGGTGGCGACCATCTGAGACAAGGATCGGTTGATC
TTCCTAAAACTCCAGGGCAGAGAGATGAGGGCTGGGGTCCACCGCCAAGGCAACGTCACT
GCACCTCTGGTCCCTTTGATCTGTCCACCGGGTCTCCTGCCCATGCCGTGGCTCCTCCGG
CTGATATCAGGCCCAGACAGCAGACACGGTCAGTCTTCGGAGCTACACTGAACAATCCAT
CAAGCACCCTGCGAAACCTCATAATCTCACCTGTCAAGCGTCCCCAGACGTCCCGTAATC
GCCAACACATATTCACGTAA