Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016234_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:151507764:151512142:-1 gene:Zm00001d016234 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence	ATGGCCGGAACCGAGCGGCTCCACCGCCCGATTGACCCGCCGCGGCCCGCGGGCAGCCGC TCCGTCGTGGTCGGTGCTGGTGGCTCGCCGGCGAGGTGGGACGACGATAACGACGACTGC GGCGGCGGCGGACGTGTCGAAGGCTTGGCGGGACTCCACATATTTGACCAAGAGGCAGAG GAGTCACCAACCAAAAACGACATGGCCAACAGCCTTGATACTAACTGCACTCCCATTGCT AAAGGATGCAACACTGAAACAACCGAAACTTCTGTAGAGTCGGAACCTGTAAATGTCTTG AACCTGCTTCATGATCATACCGGCATCTGGGTCCCTGTTTCTGTCCCGCCTATGACAGCG CTGGCCAGCGAGGATTGGCACAGAGGGTTTCGTTGCAATGGTGGGCACTTCCCGGAAGAA GAGTTCAGCTGGGAGCTGGATGAAGACAATAAGGAGATGACAATGTGGGATGTTTTTGCT GATATGGCTGTCGCAGCAAAAGATAAGGTGATATCTGCTGCAAAATATGAGTATGGGAGA TGTGGGATGTCGACAGTGTCCAACTTCTTTCTACAAGAGGCTTGGAAGGATATGGCACAA ACACTTGTGGATGCAAACACTGGTATTGCGAATGAGCTTCTTGAGACAGAGCCAACTAAG TGGTTGCCTGACAGTGCTGCCACCTCTTGCATGCTCTGTGGCGTGCGATTTCATCCAATA ATGTGCTCTCGCCATCATTGTCGTTTCTGTGGTGGAGTATTCTGCAATGGCTGTTCAAAT GGCAGAAGCTTGATGCCTCCAAAATTTAGGACTGCAGATCCTCAGAGGGTTTGTGATGTC TGCGGAGTACGTCTAGAGAGTATCCAACCTCAATTGATGAATCAGATTAGTCGGGCCTCA CAACTTCCAACTCGGGATGTCACAGACCTGAGTACCTTGAGGTCATGGCTGAATTTCCCT TGGTCACACACAATGGAATATGAGATATACAAGGCTGCAAATTCTTTACGTAGTTACTGT AAGGTGGGAAGACTGAAACCAGAGAAGTCTATCCCTGATACTATTCTTAGACAAGCAAAA GGCCTTGCTATAGTTACTGTGGTGAAGGTTGGGATGATGGTTACATACAAACTTGGCAGT GGGCTGGTTGTTGCTCGAAGAGTGGATGGCTCCTGGTCACCACCGTCAGCAATCTCCACC TGTGGTATTGGATATGGGGCTCAGGCTGGAGGTGAGATAGCTGACTTTATTATTGTTCTG AGGAACACGGATGCCATCAAAACATTCAGTGGGAAGGCACATCTATCTGTTGGTGCTGGT GTTAGCGCTTCTGCTGGCCATGTTGGACGTGCAGCTGAAGCTGACTTCCGTGCTGGTGAT GGTGGTTATGCCGCATGTTATACATACAGTTGTAGCAAAGGTGCCTTTGTGGGCTGTGCG TTGAATGGCGGCATAGTATCAACTAGAGACACTGAGAACGCACGATTTTACGGAGGTCCT GTCCAGGCATCTGATATCCTTCTAGGATCGACGGCGAGGCCGCCTGCAGCCTCTCCTCTG TACAAAGCTCTGTCAGAATTATTTGACAAGATTGGAAAGTAA

Peptide Sequence

PEP ID	Zm00001d016234_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:151507764:151512142:-1 gene:Zm00001d016234 transcript:Zm00001d016234_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence	MAGTERLHRPIDPPRPAGSRSVVVGAGGSPARWDDDNDDCGGGGRVEGLAGLHIFDQEAE ESPTKNDMANSLDTNCTPIAKGCNTETTETSVESEPVNVLNLLHDHTGIWVPVSVPPMTA LASEDWHRGFRCNGGHFPEEEFSWELDEDNKEMTMWDVFADMAVAAKDKVISAAKYEYGR CGMSTVSNFFLQEAWKDMAQTLVDANTGIANELLETEPTKWLPDSAATSCMLCGVRFHPI MCSRHHCRFCGGVFCNGCSNGRSLMPPKFRTADPQRVCDVCGVRLESIQPQLMNQISRAS QLPTRDVTDLSTLRSWLNFPWSHTMEYEIYKAANSLRSYCKVGRLKPEKSIPDTILRQAK GLAIVTVVKVGMMVTYKLGSGLVVARRVDGSWSPPSAISTCGIGYGAQAGGEIADFIIVL RNTDAIKTFSGKAHLSVGAGVSASAGHVGRAAEADFRAGDGGYAACYTYSCSKGAFVGCA LNGGIVSTRDTENARFYGGPVQASDILLGSTARPPAASPLYKALSELFDKIGK

Transcript Sequence

Transcript ID	Zm00001d016234_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:151507764:151512142:-1 gene:Zm00001d016234 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence	TTAAATTCCCAGAAAACTCTGCTCAACTCGTTCTATCGTCTGTCGTCTCGCTCTCCACAT CCGTTGATCCATCCCTTCCAACTCCAATCAACTCCGTCCCAAACTACAATCCGTGGCAAC AGAAAAAGGTGTATCTTTTACCAGAAACAGAAGCTAGATTCCCGGATTGCTCCGCTTGAT CGCTGGTGAATCGACCCAACCGAGTGGCCCATGGCCGGAACCGAGCGGCTCCACCGCCCG ATTGACCCGCCGCGGCCCGCGGGCAGCCGCTCCGTCGTGGTCGGTGCTGGTGGCTCGCCG GCGAGGTGGGACGACGATAACGACGACTGCGGCGGCGGCGGACGTGTCGAAGGCTTGGCG GGACTCCACATATTTGACCAAGAGGCAGAGGAGTCACCAACCAAAAACGACATGGCCAAC AGCCTTGATACTAACTGCACTCCCATTGCTAAAGGATGCAACACTGAAACAACCGAAACT TCTGTAGAGTCGGAACCTGTAAATGTCTTGAACCTGCTTCATGATCATACCGGCATCTGG GTCCCTGTTTCTGTCCCGCCTATGACAGCGCTGGCCAGCGAGGATTGGCACAGAGGGTTT CGTTGCAATGGTGGGCACTTCCCGGAAGAAGAGTTCAGCTGGGAGCTGGATGAAGACAAT AAGGAGATGACAATGTGGGATGTTTTTGCTGATATGGCTGTCGCAGCAAAAGATAAGGTG ATATCTGCTGCAAAATATGAGTATGGGAGATGTGGGATGTCGACAGTGTCCAACTTCTTT CTACAAGAGGCTTGGAAGGATATGGCACAAACACTTGTGGATGCAAACACTGGTATTGCG AATGAGCTTCTTGAGACAGAGCCAACTAAGTGGTTGCCTGACAGTGCTGCCACCTCTTGC ATGCTCTGTGGCGTGCGATTTCATCCAATAATGTGCTCTCGCCATCATTGTCGTTTCTGT GGTGGAGTATTCTGCAATGGCTGTTCAAATGGCAGAAGCTTGATGCCTCCAAAATTTAGG ACTGCAGATCCTCAGAGGGTTTGTGATGTCTGCGGAGTACGTCTAGAGAGTATCCAACCT CAATTGATGAATCAGATTAGTCGGGCCTCACAACTTCCAACTCGGGATGTCACAGACCTG AGTACCTTGAGGTCATGGCTGAATTTCCCTTGGTCACACACAATGGAATATGAGATATAC AAGGCTGCAAATTCTTTACGTAGTTACTGTAAGGTGGGAAGACTGAAACCAGAGAAGTCT ATCCCTGATACTATTCTTAGACAAGCAAAAGGCCTTGCTATAGTTACTGTGGTGAAGGTT GGGATGATGGTTACATACAAACTTGGCAGTGGGCTGGTTGTTGCTCGAAGAGTGGATGGC TCCTGGTCACCACCGTCAGCAATCTCCACCTGTGGTATTGGATATGGGGCTCAGGCTGGA GGTGAGATAGCTGACTTTATTATTGTTCTGAGGAACACGGATGCCATCAAAACATTCAGT GGGAAGGCACATCTATCTGTTGGTGCTGGTGTTAGCGCTTCTGCTGGCCATGTTGGACGT GCAGCTGAAGCTGACTTCCGTGCTGGTGATGGTGGTTATGCCGCATGTTATACATACAGT TGTAGCAAAGGTGCCTTTGTGGGCTGTGCGTTGAATGGCGGCATAGTATCAACTAGAGAC ACTGAGAACGCACGATTTTACGGAGGTCCTGTCCAGGCATCTGATATCCTTCTAGGATCG ACGGCGAGGCCGCCTGCAGCCTCTCCTCTGTACAAAGCTCTGTCAGAATTATTTGACAAG ATTGGAAAGTAATCCTCTCTCTTGCAGACCCTGCCTCACCTTGTAAATACAATCGAATTT GTGCCCTTCAGGAATTGGTTGGAAACAATTGCGCAACTGTACAGTAAGGCCATTCTTCAA CACGTCAAATGTGTTTAGTGATGCTACCAACAAAACCACTCTGTAAATATTTGTACATTG GATTGACAATCGCATCAAGATGTGAAAAAAGGTGTTTATTCTTTGTCGTCGGTGTTGGGT ATGGCGGTGCGTGCAACCCGGACGCTTGACGATTATGATTCGAATAACA