Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016225_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:151044249:151046438:-1 gene:Zm00001d016225 gene_biotype:protein_coding transcript_biotype:protein_coding description:U-box domain-containing protein 17
Sequence

ATGGCCGCGCCGGCCTCGTCGCCGGTCGAGTTCCTGCTCCACCGCCCGCTGCCGCGCCAG
CGGAGGAGGCCGCCACTGGCCGGAGCGTTCTTCGCGCCCACGGGGCTGTCCGGCGCACCG
CTGCTCCGCGCGCTGGCGTCGCTCGCGGCGGACCTGCTGGGGACCCCGCCCCTGCCGTCG
CAGCGACGGAACATCGACGCGCTCATGCGGAGGCTCGCGCTGCTCTCCGCGCTCCTCGAC
TCGCTCCTGCTCCTCCTCGCCGACGAAGGCGAGGCCGCCTTCTCCGACGCCGCCAACCTC
TGCTTCCGCGAGCTCTACGTCGTGCTCTTCCGCGCCGACCTGCTCGTCTCCTACGTCGCC
TCCGCCGGCCGCGCGTGGGCGCTGCTACGGGCGCCCCAGCTCGCCGCCTCGTTCCGCGAC
CTTGACGCCGAGCTCGCAGTCGTCCTCGACGTCCTACCCGCCGCCTCGCTCCGCCTCTCG
TGGGACGCCGCTCAGTACCTCGACTTCCTCCGCGCGCGCTGCCGCCGACGGGCGCCGGCC
CACTACCACGACCCCGCGGAGGCCGCTCTCGGAGACTGCCTCCTCGCCGCCCTGCGCCAC
TTCGAGCTCGGCCAGCCGCCGGACCCCTCCATGCTCCGATCCCTCCTCCGCCAAATCGGC
ATCTCCGACGCCGCTTCTTGCCGCTCTGAAATCGAGTACCTGGAGGAGCAAATCTTGAAC
CAAGAGGAGGACGCCGACCTCCCCCTCATCGGCGGCGTTGTCGCCTTGCTCCGGTACTGC
CTCTTCTCCCTTTTCGACCCCAGCAACACAAAGTCGTTGCGTGTTTGGCTGTCGGTGGGG
AACAGACAGCGGCCGCTCTCCTGGAGCTGCAGCGACGACACCTCCTTCTCGGTGCCCAAG
GAGTTCTCCTGCCCGATTTCTTTGGATTTGATGCGCGATCCTGTGGTGGTCTCCACCGGA
CAGACCTATGACCGTCCGTCGATCATACAGTGGATCGAGGAGGGGCATTCCACCTGCCCC
AACTCCGGCCAGGCCCTCGCTGACAACCGGCTTGTGCCAAACCGGGCGCTCCGCAGCTTG
ATTTCACAGTGGTGCGGGGTGCATGGCTTTCAGTTTGATTCGCCGGAGAGCAACGAGGGG
ATGATTGAATGTGTTGCCGTGTCGTGCAGCAGCAAGGCAGCAATTGAGGCAAACAAAGCC
ACAGCAAGGATTTTGGTCAAGATGCTGATGGAGGGATCCGATAATGCAAAGCCAGTCGCA
GCTAGGGAAATCCGGTTGTTGGCAAAGACTGGGAAGCAAAACCGGGCGTTCATTGCTGAG
TTGGGTGCGATACCGTTGCTATGCAGGTTGCTGCTGTCATCGGATTGGATGGCGCAGGAG
AACGCAGTGACTGCATTGCTCAATCTATCAATCTTTGAGCCGAACAAGACCCGGATTATG
GAACAAGAGGATTGCCTGCATCTTATCGTCAGTGTGTTGAAGAACGGTTTGACAACAGAG
GCCAAGGAGAATGCTGCAGCTACGCTCTTCAGTTTATCTGTGGTCCATGACTACAAGAAA
AAGATAATGAATGAGCCAGGGGCTGTGGAGGAGCTTGCGTCTATGCTGACCAAGGGGACA
GCAAGGGGAAAGAAAGACGCAGTGATGGCATTGTTCAACCTCTCAACACACCCAGAAAGC
TCAGGACGGATGCTTGAGTCATCTGCAGTTGTATCTTTAATTGAGTCACTGAGGAATGAT
ACCGTTTCGGAGGAAGCTGCTGGTGCTCTGGCTCTGCTGATGAAGCAGCCTAGCATCGTG
CACCTTGTTGGTAGCTCTGAAACAGTGATCACTAGCCTTGTTGGGTTAATGAGGCGTGGG
ACTCCAAAGGGCAAGGAGAACGCAGTGTCAGCTTTGTATGAGATATGCCGGAGAGGTGGA
TCGACATTGGCACAGCGCGTGGCAAGGATACCCGGGTTGAACACGGTAATGCAGAACATC
ACGCTCACAGGAACGAAGCGTGCCAAGAAGAAGGCAAGCCTGATCGTCAAGATGTGCCAG
AGAAGCCAAATGCCATCGGCGCTGGCGCTAGGAAGTACCTTGGCAGTGGTGGATCATTCG
TTGGTAGGGAACAGCAGATTGAGGCGCGCTCCAAGCTTTGGCAGCGGGGAGTTGTCAAAC
CCTGTGTCAATTTCAGTGCCTGTGCCTTAG

Peptide Sequence

PEP ID

Zm00001d016225_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:151044249:151046438:-1 gene:Zm00001d016225 transcript:Zm00001d016225_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:U-box domain-containing protein 17
Sequence

MAAPASSPVEFLLHRPLPRQRRRPPLAGAFFAPTGLSGAPLLRALASLAADLLGTPPLPS
QRRNIDALMRRLALLSALLDSLLLLLADEGEAAFSDAANLCFRELYVVLFRADLLVSYVA
SAGRAWALLRAPQLAASFRDLDAELAVVLDVLPAASLRLSWDAAQYLDFLRARCRRRAPA
HYHDPAEAALGDCLLAALRHFELGQPPDPSMLRSLLRQIGISDAASCRSEIEYLEEQILN
QEEDADLPLIGGVVALLRYCLFSLFDPSNTKSLRVWLSVGNRQRPLSWSCSDDTSFSVPK
EFSCPISLDLMRDPVVVSTGQTYDRPSIIQWIEEGHSTCPNSGQALADNRLVPNRALRSL
ISQWCGVHGFQFDSPESNEGMIECVAVSCSSKAAIEANKATARILVKMLMEGSDNAKPVA
AREIRLLAKTGKQNRAFIAELGAIPLLCRLLLSSDWMAQENAVTALLNLSIFEPNKTRIM
EQEDCLHLIVSVLKNGLTTEAKENAAATLFSLSVVHDYKKKIMNEPGAVEELASMLTKGT
ARGKKDAVMALFNLSTHPESSGRMLESSAVVSLIESLRNDTVSEEAAGALALLMKQPSIV
HLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSTLAQRVARIPGLNTVMQNI
TLTGTKRAKKKASLIVKMCQRSQMPSALALGSTLAVVDHSLVGNSRLRRAPSFGSGELSN
PVSISVPVP

Transcript Sequence

Transcript ID

Zm00001d016225_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:151044249:151046438:-1 gene:Zm00001d016225 gene_biotype:protein_coding transcript_biotype:protein_coding description:U-box domain-containing protein 17
Sequence

ATGGCCGCGCCGGCCTCGTCGCCGGTCGAGTTCCTGCTCCACCGCCCGCTGCCGCGCCAG
CGGAGGAGGCCGCCACTGGCCGGAGCGTTCTTCGCGCCCACGGGGCTGTCCGGCGCACCG
CTGCTCCGCGCGCTGGCGTCGCTCGCGGCGGACCTGCTGGGGACCCCGCCCCTGCCGTCG
CAGCGACGGAACATCGACGCGCTCATGCGGAGGCTCGCGCTGCTCTCCGCGCTCCTCGAC
TCGCTCCTGCTCCTCCTCGCCGACGAAGGCGAGGCCGCCTTCTCCGACGCCGCCAACCTC
TGCTTCCGCGAGCTCTACGTCGTGCTCTTCCGCGCCGACCTGCTCGTCTCCTACGTCGCC
TCCGCCGGCCGCGCGTGGGCGCTGCTACGGGCGCCCCAGCTCGCCGCCTCGTTCCGCGAC
CTTGACGCCGAGCTCGCAGTCGTCCTCGACGTCCTACCCGCCGCCTCGCTCCGCCTCTCG
TGGGACGCCGCTCAGTACCTCGACTTCCTCCGCGCGCGCTGCCGCCGACGGGCGCCGGCC
CACTACCACGACCCCGCGGAGGCCGCTCTCGGAGACTGCCTCCTCGCCGCCCTGCGCCAC
TTCGAGCTCGGCCAGCCGCCGGACCCCTCCATGCTCCGATCCCTCCTCCGCCAAATCGGC
ATCTCCGACGCCGCTTCTTGCCGCTCTGAAATCGAGTACCTGGAGGAGCAAATCTTGAAC
CAAGAGGAGGACGCCGACCTCCCCCTCATCGGCGGCGTTGTCGCCTTGCTCCGGTACTGC
CTCTTCTCCCTTTTCGACCCCAGCAACACAAAGTCGTTGCGTGTTTGGCTGTCGGTGGGG
AACAGACAGCGGCCGCTCTCCTGGAGCTGCAGCGACGACACCTCCTTCTCGGTGCCCAAG
GAGTTCTCCTGCCCGATTTCTTTGGATTTGATGCGCGATCCTGTGGTGGTCTCCACCGGA
CAGACCTATGACCGTCCGTCGATCATACAGTGGATCGAGGAGGGGCATTCCACCTGCCCC
AACTCCGGCCAGGCCCTCGCTGACAACCGGCTTGTGCCAAACCGGGCGCTCCGCAGCTTG
ATTTCACAGTGGTGCGGGGTGCATGGCTTTCAGTTTGATTCGCCGGAGAGCAACGAGGGG
ATGATTGAATGTGTTGCCGTGTCGTGCAGCAGCAAGGCAGCAATTGAGGCAAACAAAGCC
ACAGCAAGGATTTTGGTCAAGATGCTGATGGAGGGATCCGATAATGCAAAGCCAGTCGCA
GCTAGGGAAATCCGGTTGTTGGCAAAGACTGGGAAGCAAAACCGGGCGTTCATTGCTGAG
TTGGGTGCGATACCGTTGCTATGCAGGTTGCTGCTGTCATCGGATTGGATGGCGCAGGAG
AACGCAGTGACTGCATTGCTCAATCTATCAATCTTTGAGCCGAACAAGACCCGGATTATG
GAACAAGAGGATTGCCTGCATCTTATCGTCAGTGTGTTGAAGAACGGTTTGACAACAGAG
GCCAAGGAGAATGCTGCAGCTACGCTCTTCAGTTTATCTGTGGTCCATGACTACAAGAAA
AAGATAATGAATGAGCCAGGGGCTGTGGAGGAGCTTGCGTCTATGCTGACCAAGGGGACA
GCAAGGGGAAAGAAAGACGCAGTGATGGCATTGTTCAACCTCTCAACACACCCAGAAAGC
TCAGGACGGATGCTTGAGTCATCTGCAGTTGTATCTTTAATTGAGTCACTGAGGAATGAT
ACCGTTTCGGAGGAAGCTGCTGGTGCTCTGGCTCTGCTGATGAAGCAGCCTAGCATCGTG
CACCTTGTTGGTAGCTCTGAAACAGTGATCACTAGCCTTGTTGGGTTAATGAGGCGTGGG
ACTCCAAAGGGCAAGGAGAACGCAGTGTCAGCTTTGTATGAGATATGCCGGAGAGGTGGA
TCGACATTGGCACAGCGCGTGGCAAGGATACCCGGGTTGAACACGGTAATGCAGAACATC
ACGCTCACAGGAACGAAGCGTGCCAAGAAGAAGGCAAGCCTGATCGTCAAGATGTGCCAG
AGAAGCCAAATGCCATCGGCGCTGGCGCTAGGAAGTACCTTGGCAGTGGTGGATCATTCG
TTGGTAGGGAACAGCAGATTGAGGCGCGCTCCAAGCTTTGGCAGCGGGGAGTTGTCAAAC
CCTGTGTCAATTTCAGTGCCTGTGCCTTAG