Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016175_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:148523498:148526256:-1 gene:Zm00001d016175 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 39 description:Homeodomain-like superfamily protein
Sequence	ATGGTAGCTAGAGAAGAGCAAGCGATGACGAGAGAGGTCAAAGGTAAGGGGTTACTAGTT GACATCCTTGATGACCACGAGGAGGTATCAATCGATAACAGCAAGCTGCTAGACCTCAAC GAGGGTTTCGATGTGGAGGATGAAGGAGGGGAAGCTGCAGGCGATGACGAGGACGAGGAA GACGAAGGTGAGGAGGGCGACGATGGTGGTAGCACCACCGATGTTGGTGGGAGTGCCAGC TCAAGCAACAATAGGAGCAGCAACAACAACAATTCGGAGAGCGAAAAGGCGGACGCCAAG GGAGGCAGCAAGTCAGAGGTGAGCGGTGAGCAGAGGGTTCCGTCGGTGCGGCAGTACAAC CGGTCGAAGCTGCCACGGCTCCGGTGGACTCCTGACCTCCACATGGCCTTCGTCCATGCC GTTGAGAGGCTCGGTGGGCAAGAGAGAGCGACTCCTAAGCTGGTGCTTCAGATGATGAAT GTCCGGGGCCTCAGCATTGCTCATGTAAAAAGCCACCTGCAGATGTACAGAAGCAAGAAG CTAGACCAAGATGGCCGCCCGAGGGGAGCAGTTTCCTCAGTGTATTCTCCAATGGATTTC CATTTCATGAGAGCTGATCATCGGCGCTTCCACAACATGTCCTTCTTCCAAAGAGCAGCA GCCTCGGCCTCCTCCTCCGGCGGGCAGGAACGCGGCGGCTTCTTCGCGTCGAGGAACTTC AGCACTCCGGAGTTGAGCCGGCTCTATGGACTCCTCCACCATCGCCCGGCTCCGACCCAA ACTTTCGACTTCAGAAATTCCAGTTTCAGAAATCATGAGTGGCCGTGGGCCGCGTCGTCG AATCAGCAGGAGGCGATGACAATCTCCAGGAAGCACGTTGTCATGCCACCCTCGACATCG CCGCAGACACACGCATCGCTTGCATCTTCCGCAGCGCTGAGGAGCGATCGGCGGTGGTGG CCTTTCACTGAGGCCGGCGCTGCTGTCGCCGCCGGCGAGCACAGGGCAGGGACAGGAGTT ACCAGTGTAAAATTCGACAACTGCGTCGGGAGCAGCTCTCGGCCACTTCCGTTGCCCATG TCGCCGGCCGTGTGCGGAGATCGTCGTCTTCCGTTCAGATGGCGGCACGGGGGAAGCAGT AGGGACGTAGTCGTCGGCTACCCGGGTAGCAGCTCCATGGTCGCAAAAAGATCGTCGTCG GATCCCGTCGTCATCGACGATGGGCATCAACTCGAGCGGCAGAATTCGAAGCACGTTGTA GAACCAACAAGGGCCTCCACAGCCACTCCGGCAGAGGAGGACGAGGCGTGCCTCAAGCGG CGGCCATCGTCGCCGGTGGAGGCCCAAGATGCGACGACGACGACGTTGGACCTACAGCTC AGCTTGTCCCCTACCACGGCGTCGGCCAAGAAGAGAAAGACCAGCGGGTCCTTCTTCATG GACGACACCAGCTGCGAGTTCTCGACCTCCCTCTCGCTGTCGCCACCCGTCGCCGCCCCT GCAGTTTCCACGCAGCAGCGGCAGGAAAAGACGAGACGAAGCAGCGACGACAACGGCGGA GGCGGAGGCGTTCTTGGGCAGAGTACTTTGGATCTGACCATGTCGATCAGGGCATTGGAG TGA

Peptide Sequence

PEP ID	Zm00001d016175_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:148523498:148526256:-1 gene:Zm00001d016175 transcript:Zm00001d016175_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 39 description:Homeodomain-like superfamily protein
Sequence	MVAREEQAMTREVKGKGLLVDILDDHEEVSIDNSKLLDLNEGFDVEDEGGEAAGDDEDEE DEGEEGDDGGSTTDVGGSASSSNNRSSNNNNSESEKADAKGGSKSEVSGEQRVPSVRQYN RSKLPRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRSKK LDQDGRPRGAVSSVYSPMDFHFMRADHRRFHNMSFFQRAAASASSSGGQERGGFFASRNF STPELSRLYGLLHHRPAPTQTFDFRNSSFRNHEWPWAASSNQQEAMTISRKHVVMPPSTS PQTHASLASSAALRSDRRWWPFTEAGAAVAAGEHRAGTGVTSVKFDNCVGSSSRPLPLPM SPAVCGDRRLPFRWRHGGSSRDVVVGYPGSSSMVAKRSSSDPVVIDDGHQLERQNSKHVV EPTRASTATPAEEDEACLKRRPSSPVEAQDATTTTLDLQLSLSPTTASAKKRKTSGSFFM DDTSCEFSTSLSLSPPVAAPAVSTQQRQEKTRRSSDDNGGGGGVLGQSTLDLTMSIRALE

Transcript Sequence

Transcript ID	Zm00001d016175_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:148523498:148526256:-1 gene:Zm00001d016175 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:G2-like-transcription factor 39 description:Homeodomain-like superfamily protein
Sequence	AAAGGAACGAGTCCACTGAAGCAGACATCATTTCCTGCTACACTGTTCAACACCGGTCAA TGTAGGACAAGGCCTGTGTCCAACTCTCCCTTATTTTATTCCCACATCACTACCTTGCTT ATGCTTGCTGCCCTACCCTCTCTACCTTCTCTTCATATCATTTTTGCCCTCCTTCCTCCC CCCTTTCCTGCTCCTAGCTACTACCTGCACAAACACTATTGATCAGCTGGATGAGATCCA GCCATGGTGGATTAGTGAGAGACTGATTGGTGCATGGTAGCTTAGTACACAAGATGGTAG CTAGAGAAGAGCAAGCGATGACGAGAGAGGTCAAAGGTAAGGGGTTACTAGTTGACATCC TTGATGACCACGAGGAGGTATCAATCGATAACAGCAAGCTGCTAGACCTCAACGAGGGTT TCGATGTGGAGGATGAAGGAGGGGAAGCTGCAGGCGATGACGAGGACGAGGAAGACGAAG GTGAGGAGGGCGACGATGGTGGTAGCACCACCGATGTTGGTGGGAGTGCCAGCTCAAGCA ACAATAGGAGCAGCAACAACAACAATTCGGAGAGCGAAAAGGCGGACGCCAAGGGAGGCA GCAAGTCAGAGGTGAGCGGTGAGCAGAGGGTTCCGTCGGTGCGGCAGTACAACCGGTCGA AGCTGCCACGGCTCCGGTGGACTCCTGACCTCCACATGGCCTTCGTCCATGCCGTTGAGA GGCTCGGTGGGCAAGAGAGAGCGACTCCTAAGCTGGTGCTTCAGATGATGAATGTCCGGG GCCTCAGCATTGCTCATGTAAAAAGCCACCTGCAGATGTACAGAAGCAAGAAGCTAGACC AAGATGGCCGCCCGAGGGGAGCAGTTTCCTCAGTGTATTCTCCAATGGATTTCCATTTCA TGAGAGCTGATCATCGGCGCTTCCACAACATGTCCTTCTTCCAAAGAGCAGCAGCCTCGG CCTCCTCCTCCGGCGGGCAGGAACGCGGCGGCTTCTTCGCGTCGAGGAACTTCAGCACTC CGGAGTTGAGCCGGCTCTATGGACTCCTCCACCATCGCCCGGCTCCGACCCAAACTTTCG ACTTCAGAAATTCCAGTTTCAGAAATCATGAGTGGCCGTGGGCCGCGTCGTCGAATCAGC AGGAGGCGATGACAATCTCCAGGAAGCACGTTGTCATGCCACCCTCGACATCGCCGCAGA CACACGCATCGCTTGCATCTTCCGCAGCGCTGAGGAGCGATCGGCGGTGGTGGCCTTTCA CTGAGGCCGGCGCTGCTGTCGCCGCCGGCGAGCACAGGGCAGGGACAGGAGTTACCAGTG TAAAATTCGACAACTGCGTCGGGAGCAGCTCTCGGCCACTTCCGTTGCCCATGTCGCCGG CCGTGTGCGGAGATCGTCGTCTTCCGTTCAGATGGCGGCACGGGGGAAGCAGTAGGGACG TAGTCGTCGGCTACCCGGGTAGCAGCTCCATGGTCGCAAAAAGATCGTCGTCGGATCCCG TCGTCATCGACGATGGGCATCAACTCGAGCGGCAGAATTCGAAGCACGTTGTAGAACCAA CAAGGGCCTCCACAGCCACTCCGGCAGAGGAGGACGAGGCGTGCCTCAAGCGGCGGCCAT CGTCGCCGGTGGAGGCCCAAGATGCGACGACGACGACGTTGGACCTACAGCTCAGCTTGT CCCCTACCACGGCGTCGGCCAAGAAGAGAAAGACCAGCGGGTCCTTCTTCATGGACGACA CCAGCTGCGAGTTCTCGACCTCCCTCTCGCTGTCGCCACCCGTCGCCGCCCCTGCAGTTT CCACGCAGCAGCGGCAGGAAAAGACGAGACGAAGCAGCGACGACAACGGCGGAGGCGGAG GCGTTCTTGGGCAGAGTACTTTGGATCTGACCATGTCGATCAGGGCATTGGAGTGAGATC TTTCAAGTACTTTGGCCCACCAAGGCCTTCCAAAACTTGCACACTGCGCCATGCAATAAG AATCGTTAATTTAAACCCCCCCCCCCCCCCCCCCCCTCTCCTTGTCACAGTACATACTAG ATATATCATATGTGGATGTCGTGCTTGGTTATTGTGTCCGGGAAGACCACTGATGCATGC CTCTCTCTCTCTATATTTGGTCCTTATGTAAGCATGTCCACATGCATGATCG