Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016165_T083
CDS Infomation

cds chromosome:B73_RefGen_v4:5:148101123:148110632:1 gene:Zm00001d016165 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 15
Sequence

ATGCTCCAACCAAGGGAAGCTGATGTGCCTGCACTCTTTCTTGTCTTCATTGTACTTCCC
GTGGTAGCTTATTTTCTTCTTGGGAGATGGCATGACTCTGCAAGTAAGAAGGCAAGGGCA
AGTGTGCTTGCACAGCGAGCTGCAGAAGAAGCCTATAGAGAGGAAACGATGGCGTGCCCA
GACATTATTCCGCCAGGCCCTTCCTTGAGAACTATGCCCTATTTCAAACCTGCGCCTTCG
TTAAGACAGGAATACCATGAGTGTGCAACTTGCCATGCCCCTGCAAAGACTCGTTGCTCC
AGATGCAAGTCTGTTAGATACTGCTCTGGGAAGTGTCAAATAGTACACTGGAGGCAAGGA
CATAAGGAAACATGCCAAAAATGGCTTGGTAGTGGTTCTAGCAGCTTTGGTGGATCTAGC
ACTGAGGCTACTGAACAGATGCCGTTCTTGGCTAACTTGAATTCACCTCTTCCAGGTGGT
GACATTCACTTGCGTGACATGAACTTCGATACTTTATCAGAACCATCCTTTCCCACAACT
GATGGTTACAATCTAGATACTGACCCATTTCCGGCAGATAGAAGCAACATGAATAGATCA
AATCAAGGTATTCATATGAGCGAAAATGGTGCTGTTGGTGTATCTTTTGAAAAGAATAAT
TATAATGCTGCTGATGAAATACACTCTTCGGAGATTTTATCTGGAAACAAGGTGTCAAAC
AACTATTTTGGTTCAGATGCAATGAGTGGTAATGGGGATGCAACTTATCCTGCCAAAAGT
AATGCACAGCAGCCTAGCAGTTGTGCTCCTGACGTGAGAAAACAATCAAAAGCAAGCATC
ACAGTTTATCAGCCTGACATGAGTGTCTATTTAACTTCTGACATGGTCAGTTCTTGTGAG
GGATCATATGTTTCTGCCGGTGAGCCACTGCAAAGGAGCTTGTCATCTGGAAGAACTATT
GGGAAAGTAACTGTGGTGAATAAAAGGCCTTCTTACCCATCAAGTAAGGTGGTCTCAGCA
CAAAAGTCACAGGATAAGGTGTCTACATCATATCAAAATGATGCCCATGAGAAGAATCCT
TGCAACAAAAATGACCAAAGATCTACCCCCACATGTGAATCAAGTCAATCAACAAGCAGC
AATCTACTGAAGTCTGGAACATCCAAGGTTGAAGTTTTAAAGAAGCCTTCAAAATTTCTC
AAAACCAGCCTTGTGGCATTGATCAATGATAATAAGAGGAACAAGGTATTGTTCCCATAT
GAAGATATTGTCAAGTTTTTTCAGTATGAAGCACGGGGTGTTTCCCCTAGAGGTCTTTTC
AATTGTGGAAACAGCTGCTATGCTAATGCTGTTCTTCAATGTCTCATGTGCACAAAGCCA
CTGATGATCTACCTTCTTCTGAGATTGCATTCTAAAGATTGTTGTTCAAAAAATTGGTGC
CTTATGTGTGAACTTGAGCAATATGCTTCAACTTTACGTGAAAGTGGTGGACCCTTATCT
CCAAGTAGAATCCTTTCTAATCTGAGGAATATTGGATGTCGCTTGGGTGGTGGAACTCAG
GAAGATGCCCATGAGTTTCTAAGGCATCTTGTGATGTCTATGCAAGCAGCTTGCTTGGAT
GGGCTGGGTGGTGAGAAGCACGTTGAACCAAGTTTGCAGGAAACAACACTGATACAACAG
ATGTTTGGTGGCCGTCTTAAATCCAAGGTTAAGTGCCTCAGATGCTATCACGAGTCTGAA
AGATATGAGAATATAATGGATCTTACTTTGGAGATTCATGGCTGGGTAGAGTCCTTGCAA
GATGCTTTGACACAGTTCACTGCTCCTGAAGATTTAGATGGTGATAATATGTATAAATGT
GGAAGGTGTTCTGCCTATGTTAAAGCTAGGAAGCAACTGAGCGTGCATGAGGTGCCAAAC
ATTTTAACAGTTGTTCTTAAAAGATTTCAGTCAGGAAAATATGGCAAGATCAACAAATGT
GTTACTTTCCCTGATATGTTGGACATGGTTCCCTTCGTGACTGGGTCTGGTGACAATCCC
CCTCTTTATTTCTTGTACGCCGTGGTTGTACATGTCGATACAGAAAATGCATCATTCTCT
GGGCACTATATATCATACGTCAAAGATATGCAGGGTACATGGTTGAGAATTGATGATTCA
GAGGTCCAGGTTGTATCAGTGAATCAGGTTATGTCAGAAGGTGCATACATGCTTTTCTAC
TTGAGGTCTTTTCCCCGACCACCAAGGATATACATCGAGAAGGGGCTGCCGGTTACATCC
GCAAAGCGGCACACGTCGAAATCTTCCAAGGGCTCTAAACACGATCGCAAGCAGACAGAG
TTACTCTTTCCTGCAAACGATCAGGCATATGGCGTCTATGATTTCAGACCCGATGGCGAA
GGCTATGCCCAAGATCAGCATGCAGAGCTGAGGTCCAGAGCTTTCCATCACGCCGACGAT
GCCTTTGCAGACTCGGTTAGCGCGGACTTCTCGGAAGCGACATCAAGTGAATGGTCGCTG
TTTACCAGCTCCGACGAGTCCTCGTTCACCACCGAGAGCACAAGGGATTCGTTCAGCGTC
GTGGACTACGGAGACAACGCCGGCCTGGATCCGATTTCCTCCATATTCGGGCCAAGCTAT
GCTCCGGAGCACGGTGCTCCCGGCAGTTTCGTCTCGCGCACAAGGTTCTCACCTTCCAGT
CCACAGACAAGGTACTTCTCGGAGAGCACAGGCTTTGTCTCGGACTCTTCCATGCCGGCC
CACCCCCACGGCATTGTACATAGAGGAAGGTATCCGGATAGTAGGGCGTGCGCCTCTTCT
GCGGAACCGCTTGCGTCGGCGGCGCATCAGCGGAGCGGGTATGGCCGGTACCCCCTTAGT
CGAGATGGTTTTGTTCAAACATCTGGTTTTTGCCAAATGTAA

Peptide Sequence

PEP ID

Zm00001d016165_P083
PEP Infomation

pep chromosome:B73_RefGen_v4:5:148101123:148110632:1 gene:Zm00001d016165 transcript:Zm00001d016165_T083 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 15
Sequence

MLQPREADVPALFLVFIVLPVVAYFLLGRWHDSASKKARASVLAQRAAEEAYREETMACP
DIIPPGPSLRTMPYFKPAPSLRQEYHECATCHAPAKTRCSRCKSVRYCSGKCQIVHWRQG
HKETCQKWLGSGSSSFGGSSTEATEQMPFLANLNSPLPGGDIHLRDMNFDTLSEPSFPTT
DGYNLDTDPFPADRSNMNRSNQGIHMSENGAVGVSFEKNNYNAADEIHSSEILSGNKVSN
NYFGSDAMSGNGDATYPAKSNAQQPSSCAPDVRKQSKASITVYQPDMSVYLTSDMVSSCE
GSYVSAGEPLQRSLSSGRTIGKVTVVNKRPSYPSSKVVSAQKSQDKVSTSYQNDAHEKNP
CNKNDQRSTPTCESSQSTSSNLLKSGTSKVEVLKKPSKFLKTSLVALINDNKRNKVLFPY
EDIVKFFQYEARGVSPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWC
LMCELEQYASTLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLD
GLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQ
DALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKC
VTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDS
EVQVVSVNQVMSEGAYMLFYLRSFPRPPRIYIEKGLPVTSAKRHTSKSSKGSKHDRKQTE
LLFPANDQAYGVYDFRPDGEGYAQDQHAELRSRAFHHADDAFADSVSADFSEATSSEWSL
FTSSDESSFTTESTRDSFSVVDYGDNAGLDPISSIFGPSYAPEHGAPGSFVSRTRFSPSS
PQTRYFSESTGFVSDSSMPAHPHGIVHRGRYPDSRACASSAEPLASAAHQRSGYGRYPLS
RDGFVQTSGFCQM

Transcript Sequence

Transcript ID

Zm00001d016165_T083
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:148101123:148110632:1 gene:Zm00001d016165 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 15
Sequence

AGGTCAATAAGTATTCTGGAATGTTTTTCCGAGCTCAAATAGAGAACTTCTGGAGCTGGA
TATCAGTATTCTGTTAGGGATATGCTCCAACCAAGGGAAGCTGATGTGCCTGCACTCTTT
CTTGTCTTCATTGTACTTCCCGTGGTAGCTTATTTTCTTCTTGGGAGATGGCATGACTCT
GCAAGTAAGAAGGCAAGGGCAAGTGTGCTTGCACAGCGAGCTGCAGAAGAAGCCTATAGA
GAGGAAACGATGGCGTGCCCAGACATTATTCCGCCAGGCCCTTCCTTGAGAACTATGCCC
TATTTCAAACCTGCGCCTTCGTTAAGACAGGAATACCATGAGTGTGCAACTTGCCATGCC
CCTGCAAAGACTCGTTGCTCCAGATGCAAGTCTGTTAGATACTGCTCTGGGAAGTGTCAA
ATAGTACACTGGAGGCAAGGACATAAGGAAACATGCCAAAAATGGCTTGGTAGTGGTTCT
AGCAGCTTTGGTGGATCTAGCACTGAGGCTACTGAACAGATGCCGTTCTTGGCTAACTTG
AATTCACCTCTTCCAGGTGGTGACATTCACTTGCGTGACATGAACTTCGATACTTTATCA
GAACCATCCTTTCCCACAACTGATGGTTACAATCTAGATACTGACCCATTTCCGGCAGAT
AGAAGCAACATGAATAGATCAAATCAAGGTATTCATATGAGCGAAAATGGTGCTGTTGGT
GTATCTTTTGAAAAGAATAATTATAATGCTGCTGATGAAATACACTCTTCGGAGATTTTA
TCTGGAAACAAGGTGTCAAACAACTATTTTGGTTCAGATGCAATGAGTGGTAATGGGGAT
GCAACTTATCCTGCCAAAAGTAATGCACAGCAGCCTAGCAGTTGTGCTCCTGACGTGAGA
AAACAATCAAAAGCAAGCATCACAGTTTATCAGCCTGACATGAGTGTCTATTTAACTTCT
GACATGGTCAGTTCTTGTGAGGGATCATATGTTTCTGCCGGTGAGCCACTGCAAAGGAGC
TTGTCATCTGGAAGAACTATTGGGAAAGTAACTGTGGTGAATAAAAGGCCTTCTTACCCA
TCAAGTAAGGTGGTCTCAGCACAAAAGTCACAGGATAAGGTGTCTACATCATATCAAAAT
GATGCCCATGAGAAGAATCCTTGCAACAAAAATGACCAAAGATCTACCCCCACATGTGAA
TCAAGTCAATCAACAAGCAGCAATCTACTGAAGTCTGGAACATCCAAGGTTGAAGTTTTA
AAGAAGCCTTCAAAATTTCTCAAAACCAGCCTTGTGGCATTGATCAATGATAATAAGAGG
AACAAGGTATTGTTCCCATATGAAGATATTGTCAAGTTTTTTCAGTATGAAGCACGGGGT
GTTTCCCCTAGAGGTCTTTTCAATTGTGGAAACAGCTGCTATGCTAATGCTGTTCTTCAA
TGTCTCATGTGCACAAAGCCACTGATGATCTACCTTCTTCTGAGATTGCATTCTAAAGAT
TGTTGTTCAAAAAATTGGTGCCTTATGTGTGAACTTGAGCAATATGCTTCAACTTTACGT
GAAAGTGGTGGACCCTTATCTCCAAGTAGAATCCTTTCTAATCTGAGGAATATTGGATGT
CGCTTGGGTGGTGGAACTCAGGAAGATGCCCATGAGTTTCTAAGGCATCTTGTGATGTCT
ATGCAAGCAGCTTGCTTGGATGGGCTGGGTGGTGAGAAGCACGTTGAACCAAGTTTGCAG
GAAACAACACTGATACAACAGATGTTTGGTGGCCGTCTTAAATCCAAGGTTAAGTGCCTC
AGATGCTATCACGAGTCTGAAAGATATGAGAATATAATGGATCTTACTTTGGAGATTCAT
GGCTGGGTAGAGTCCTTGCAAGATGCTTTGACACAGTTCACTGCTCCTGAAGATTTAGAT
GGTGATAATATGTATAAATGTGGAAGGTGTTCTGCCTATGTTAAAGCTAGGAAGCAACTG
AGCGTGCATGAGGTGCCAAACATTTTAACAGTTGTTCTTAAAAGATTTCAGTCAGGAAAA
TATGGCAAGATCAACAAATGTGTTACTTTCCCTGATATGTTGGACATGGTTCCCTTCGTG
ACTGGGTCTGGTGACAATCCCCCTCTTTATTTCTTGTACGCCGTGGTTGTACATGTCGAT
ACAGAAAATGCATCATTCTCTGGGCACTATATATCATACGTCAAAGATATGCAGGGTACA
TGGTTGAGAATTGATGATTCAGAGGTCCAGGTTGTATCAGTGAATCAGGTTATGTCAGAA
GGTGCATACATGCTTTTCTACTTGAGGTCTTTTCCCCGACCACCAAGGATATACATCGAG
AAGGGGCTGCCGGTTACATCCGCAAAGCGGCACACGTCGAAATCTTCCAAGGGCTCTAAA
CACGATCGCAAGCAGACAGAGTTACTCTTTCCTGCAAACGATCAGGCATATGGCGTCTAT
GATTTCAGACCCGATGGCGAAGGCTATGCCCAAGATCAGCATGCAGAGCTGAGGTCCAGA
GCTTTCCATCACGCCGACGATGCCTTTGCAGACTCGGTTAGCGCGGACTTCTCGGAAGCG
ACATCAAGTGAATGGTCGCTGTTTACCAGCTCCGACGAGTCCTCGTTCACCACCGAGAGC
ACAAGGGATTCGTTCAGCGTCGTGGACTACGGAGACAACGCCGGCCTGGATCCGATTTCC
TCCATATTCGGGCCAAGCTATGCTCCGGAGCACGGTGCTCCCGGCAGTTTCGTCTCGCGC
ACAAGGTTCTCACCTTCCAGTCCACAGACAAGGTACTTCTCGGAGAGCACAGGCTTTGTC
TCGGACTCTTCCATGCCGGCCCACCCCCACGGCATTGTACATAGAGGAAGGTATCCGGAT
AGTAGGGCGTGCGCCTCTTCTGCGGAACCGCTTGCGTCGGCGGCGCATCAGCGGAGCGGG
TATGGCCGGTACCCCCTTAGTCGAGATGGTTTTGTTCAAACATCTGGTTTTTGCCAAATG
TAATCGGCTCACATTTCATTAGCTGTAGCTGGTGCATCGGCAGTTGCGGTTCTTAGCACT
GCCGTTAATGCTGCCTCATGTTCTTTTATTTCAGGTGAAATTTTAGAGCATGGTGACAAG
CTCTG