Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016144_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:5:146540270:146555384:-1 gene:Zm00001d016144 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase 3
Sequence	ATGTTTCCTCGGGAAGTAACAGTTCCAGGCTATACACACCCATTGGTTGCAGTTGGCACA GGTTACAGAGAAAAGTTTTTTGTCAAAGTATATGCTGCCGCGTTCTATGTAGATTACTCA CTTCGCCTTGATACTGAGCAATGGAAAGCAAAGACTGGTATTGAGAGCTTTGACAGTTCC TCTGTTTTCGACTCCATTTTTAAGGCACCGGTTGTGAAATCATTGAGTATAATTCTTGTT AGAGCCGTTGATGGCAAGACCTTTGTGAATGCTCTAAATGATGTCATTGCCCGCCAAATA AAAAACCCAAACGCCGAGGAAGAATCTTCCCTGTCAACCTTGCAGAATACCTTTCTTGGG CGCAATCTCAAACAGGGAACAAGCATATACTTAACTTGGCTTGAACCCAAAAGAATGCTG ATCTCCATTTCGGAAGATGAAGATCCACGTCAAGTTGATGCAGAGATCAAATCTGCTACT GTTAATTATGCTCTATATGATGGCTTCTTTGGTAAATCCACAGTGTGCCCTTCTTTAAGA TCATCTACAGCCCAGTTGCTGGACGCGCTTCTGCTTGCGAAGTGA

Peptide Sequence

PEP ID	Zm00001d016144_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:5:146540270:146555384:-1 gene:Zm00001d016144 transcript:Zm00001d016144_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase 3
Sequence	MFPREVTVPGYTHPLVAVGTGYREKFFVKVYAAAFYVDYSLRLDTEQWKAKTGIESFDSS SVFDSIFKAPVVKSLSIILVRAVDGKTFVNALNDVIARQIKNPNAEEESSLSTLQNTFLG RNLKQGTSIYLTWLEPKRMLISISEDEDPRQVDAEIKSATVNYALYDGFFGKSTVCPSLR SSTAQLLDALLLAK

Transcript Sequence

Transcript ID	Zm00001d016144_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:146540270:146555384:-1 gene:Zm00001d016144 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone isomerase 3
Sequence	ACAGCTCTCGTCACGACAGATAAGGCCATGTGCATCCTTCGCCACTCACCAGCGCTCTCC AGTCCACTTCACTTCATCCCTGATCGGCGATCGCGTCGAGCGAGCAGCGCTATAACGCAC GATGAACTTGGCGTCCGTCGTTCCCTGCGCGCAGGCATTCCTCGCGTTAATGACTCCCGC CGCTGGCTCCCACCGTCGGGTCCACACGCATGCGGCGGCCTCCAAGAGCGGATTGGCCTG CCGCGTCGCGCGCAGCGGGGGCACCCGGTGGCTGCCGGTCTCCTGTGCAGCCGGGGGCGG TGCAGCATGGGAGGAATTTGCTTGGTGAGGGGCTTGGAGTACTCTTGGGGGAGATAGGCG TTCGCTTCATGCTTATCCAACAGAGTGAGTCATCAAATCAGATCTAAGTTCTTGAATAAA CTGGTGCAATTTCCAGTGGTCTCAATTCTTTCATCTACGATGAGCACTAATAGTTGAGAA AGAACATGCCAATTCATATCCCGGTTCATACCTGCTCCCGATATCTATTATCGAGGATAC TTGCTCTTTTACACGACGGGTAACAGCAGTTCTCATCCTCTCTTATGGATTCTACTTGCT TCTGTTCCATGTTTAGCATCGCTGGCCCGAGTGTTATTCCTGTTGTCCAAAATCTTTGAG CCTTACTGCTACAGGGTGTGCTGAACTTTGATTCTATCCATCATAATCAAAAAGGGGAAA AGGTGATGTCTGCACTTTCTAGTTTCTGGAAAAGAACTCTTTATGCTGTCCTTTATTATG AAATAAGTGTAGGTTGAAACTCATATATTTAGTTTTTTGCCACTAAGATTAACTGTGTGG GAAGTTATTATTTGGAATATTTAAATTCATGGGAAATTAAAATAAACAAATAAAACTTAT TTACTCACTAGGAAAATCATTTTTAGGGTGTTACATCAGTAGATCCATACAGAACAATCC GGTAAGGAGAAGCAGCAATACTGGGTGCAGTTGCATTAGGGTTTGTTGAACAAAGGTTTC CAGTAGTAGTTTGCAATCCCCAGGCAGAAAATATGGTGGAATAGCAACTGATCTGCAACT AGCTTATCAGCCACTATTGGGAATCCCACCGGCGAACCTGCAGGTTGTCACTGGGGAGAG AGCACCTGCAGCGCTCTATGTGTAGCCAAAGAATGTAAGGATGCAGCTTGGTCCACAGTA GTAAAACCAAACTTTGTTGGCACTAAAAAACAAGTGGATTGAGCAGCTTGAAAAGGAGAA TTATTCAGCTTCCTCTATTGTGCTGAACTGACTTCTGAAGCACTATTTTTTGCTGCAAGT GCAGTTATAAGGAAAGGTGTTACTGCTATGCATTGGTGCTGGACCTCATGATGAAGCATT GTGCTCATTCTGTTTAGGTTCTGAACTTTTGTGTTTCTTTCACAGGCAGTGAAGACCATT ATTGTCAGTCTTGTCTTGTGCCCCATTGCTATAATCATCTTTTTCATTGGGATCAATCTC AATAGGTGGGATGGCTTGTATAAATTCGTCAACCTCTAAAGTGAAAGTTATGTCATAACC CACCTTGATCAGTGGTACACGGGAATTGTTCCATATTCAACACTGTGCATGTCAACATCT TGGGCTGCACCAACCACAATTCCCACTACCCAAAAAGCTAGGTGCTGGCGCCAAGCAAAG AGCTTGCCTGAAATATGGATCTGGATGACCAAGTGCAATAGAAATAGTTTTAGGGTGGAG AAATGATTGGGACTGATACCTGATCTATATTTTTCCCTTTTGTGTGCACACATCTTAGCT AGCAATGCATGTATTTTATATAACTTCTGTTGCTCCTTAATATCAGGTTGGTCGTACCAC AGTCAAATCTACAGAAGACCTGATTCTTGGCGTTCCCTTGATAACTGTCAATCTGTTGGA CTTGTACTTAAGTCTCATGTATACACAATTATACATATGAATATGTTGTAAGTTGTGATT AGTCGATTAGGAGTCTTACATTGAAAATTTTACATCCAGTCATCTAGCTGCAAAGCTTGC TATCTTAGCTTTTGAAGCTTTAGAAAAAAGATTGTTAGATAAACTGTCTGTCCCAAGTTC GCTTGTCATGATATATTTTTTTCTTCAAATGTGTTTGAGTTTTTTCTCTAGAATATTTAC TATTACAATGACTCAACCCATCTTTCTCTGTAGTTGGTGACACTTTTGTTACTGAGGACA CTACAAATGTGATGTTTCCTCGGGAAGTAACAGTTCCAGGCTATACACACCCATTGGTTG CAGTTGGCACAGGTTACAGAGAAAAGTTTTTTGTCAAAGTATATGCTGCCGCGTTCTATG TAGATTACTCACTTCGCCTTGATACTGAGCAATGGAAAGCAAAGACTGGTATTGAGAGCT TTGACAGTTCCTCTGTTTTCGACTCCATTTTTAAGGCACCGGTTGTGAAATCATTGAGTA TAATTCTTGTTAGAGCCGTTGATGGCAAGACCTTTGTGAATGCTCTAAATGATGTCATTG CCCGCCAAATAAAAAACCCAAACGCCGAGGAAGAATCTTCCCTGTCAACCTTGCAGAATA CCTTTCTTGGGCGCAATCTCAAACAGGGAACAAGCATATACTTAACTTGGCTTGAACCCA AAAGAATGCTGATCTCCATTTCGGAAGATGAAGATCCACGTCAAGTTGATGCAGAGATCA AATCTGCTACTGTTAATTATGCTCTATATGATGGCTTCTTTGGTAAATCCACAGTGTGCC CTTCTTTAAGATCATCTACAGCCCAGTTGCTGGACGCGCTTCTGCTTGCGAAGTGACAAA CCAGTCGTGGTTCCATATCAATGGTTACGAGTGGTTATTCCCTTCTCCCTTGTTTTCCCG AGGGAACACAGGACGGGCTAGGTGTCCATAATCATAAGTCCCATAAAGGAAATTAATTTA ATTATTATAGAGTTCATATGTAACATTTTTGTCGTCCCTGATGAAATATGGTGAATTTGT