Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016142_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:146519042:146519647:1 gene:Zm00001d016142 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL5H

Sequence

ATGCCCAGGCAGCACCGCCAGCGACAGCCGCCGAGTGTCCGGCCCAACGGCTGCTCCCTC
GTCTGCTATGGCATCGTCGTGGCCACCGCGTCGCTGCTCCTGCTCGCCATACTCGCTGCC
ACAGTCAGCATCGTCAAGGCGTGCGCCCTCGCCGGCGCTGTCGCGGTGGTGTTCAGCGCT
GCGGGCTATGTCTCTCGGTGGTGCGCAGCAGAGGACGGCGCTGCTCATGCGCTGGCGCTG
CCCACGACGATGGCGACGCCAGCCGCGCGCGGCCGCGCGGTGTGTGGCCTCGTTGACGCG
GCGATCGACGCGCTGCCGGCGTTCGCGTACGCGCGCCCTGCCACGTGTGGCGCAGAAAGT
AGCAGCAAGTCCGGAAGACTCGCACTCTGCCCGGTATGCCTGGAGGAGGTCGAGGCCGGC
GAGATGGTCCGGCAGCTGCCTGCGTGCGGCCACCTGTTCCACGTGGAGTGCATCGACATG
TGGCTGCACTCGCATGCGTCGTGCCCTCTGTGCCGATGCGACGTCTCGCCGCAGGCAGTT
GCTATGACGGTCACGGAAGCTGCAGATCCACCGCATGGTGCGCTGCCGGTGATGGTGAGC
TGCTGA

Peptide Sequence

PEP ID

Zm00001d016142_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:146519042:146519647:1 gene:Zm00001d016142 transcript:Zm00001d016142_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL5H

Sequence

MPRQHRQRQPPSVRPNGCSLVCYGIVVATASLLLLAILAATVSIVKACALAGAVAVVFSA
AGYVSRWCAAEDGAAHALALPTTMATPAARGRAVCGLVDAAIDALPAFAYARPATCGAES
SSKSGRLALCPVCLEEVEAGEMVRQLPACGHLFHVECIDMWLHSHASCPLCRCDVSPQAV
AMTVTEAADPPHGALPVMVSC

Transcript Sequence

Transcript ID

Zm00001d016142_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:146519042:146519647:1 gene:Zm00001d016142 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL5H

Sequence

ATGCCCAGGCAGCACCGCCAGCGACAGCCGCCGAGTGTCCGGCCCAACGGCTGCTCCCTC
GTCTGCTATGGCATCGTCGTGGCCACCGCGTCGCTGCTCCTGCTCGCCATACTCGCTGCC
ACAGTCAGCATCGTCAAGGCGTGCGCCCTCGCCGGCGCTGTCGCGGTGGTGTTCAGCGCT
GCGGGCTATGTCTCTCGGTGGTGCGCAGCAGAGGACGGCGCTGCTCATGCGCTGGCGCTG
CCCACGACGATGGCGACGCCAGCCGCGCGCGGCCGCGCGGTGTGTGGCCTCGTTGACGCG
GCGATCGACGCGCTGCCGGCGTTCGCGTACGCGCGCCCTGCCACGTGTGGCGCAGAAAGT
AGCAGCAAGTCCGGAAGACTCGCACTCTGCCCGGTATGCCTGGAGGAGGTCGAGGCCGGC
GAGATGGTCCGGCAGCTGCCTGCGTGCGGCCACCTGTTCCACGTGGAGTGCATCGACATG
TGGCTGCACTCGCATGCGTCGTGCCCTCTGTGCCGATGCGACGTCTCGCCGCAGGCAGTT
GCTATGACGGTCACGGAAGCTGCAGATCCACCGCATGGTGCGCTGCCGGTGATGGTGAGC
TGCTGA