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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016136_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:146126753:146127304:-1 gene:Zm00001d016136 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

ATGAGCGTCATGTCCGCGGTGGATGGGTCGCCGGGGACTCCGCCGCCACCGGGCCACCGT
GGGTGCTGCGCCTCCGGCGCGACGCTGGAGCTGGTGGGCGCGTTCACGGCGGTGTGCCTG
GTGCTGTACGGCGTGATCCTGTACATGAACTACCTCTACGTGCGGTGGAGCGGCCGCGAC
GGCGTGCACCGGACGGACTCCGGCGCAGGCGGGCTGCCCGCACGGAAGCGGGCCGGCGGC
GGGATCGACAAGGCGGCGCTGGCTGCCATGCCGGTGGTCAGGTTCAAGGCGGACGCTCAC
TGCGGCGGCGACTCTCCTGTGGAGTGCGCGGTGTGCCTGAGCGCCATGCAGGACGGGGAC
GCGGTGCGCGCGCTGCCCGGATGCCGGCACGCGTTCCACGTCACCTGCGTCGACGCCTGG
CTCTGCGCACGCGCCACCTGCCCCGTCTGCCGCGCGCGCCCCGCGCTCCCGCCGCCGCAG
CAGGCGCCCAAGGCCGGCGCCATGGTGGCGGGGTCCTCCGGCCGGCACCCGGACCTGGAG
AGCCAAGTGTAG

Peptide Sequence

PEP ID

Zm00001d016136_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:146126753:146127304:-1 gene:Zm00001d016136 transcript:Zm00001d016136_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

MSVMSAVDGSPGTPPPPGHRGCCASGATLELVGAFTAVCLVLYGVILYMNYLYVRWSGRD
GVHRTDSGAGGLPARKRAGGGIDKAALAAMPVVRFKADAHCGGDSPVECAVCLSAMQDGD
AVRALPGCRHAFHVTCVDAWLCARATCPVCRARPALPPPQQAPKAGAMVAGSSGRHPDLE
SQV

Transcript Sequence

Transcript ID

Zm00001d016136_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:146126753:146127304:-1 gene:Zm00001d016136 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase ATL41
Sequence

ATGAGCGTCATGTCCGCGGTGGATGGGTCGCCGGGGACTCCGCCGCCACCGGGCCACCGT
GGGTGCTGCGCCTCCGGCGCGACGCTGGAGCTGGTGGGCGCGTTCACGGCGGTGTGCCTG
GTGCTGTACGGCGTGATCCTGTACATGAACTACCTCTACGTGCGGTGGAGCGGCCGCGAC
GGCGTGCACCGGACGGACTCCGGCGCAGGCGGGCTGCCCGCACGGAAGCGGGCCGGCGGC
GGGATCGACAAGGCGGCGCTGGCTGCCATGCCGGTGGTCAGGTTCAAGGCGGACGCTCAC
TGCGGCGGCGACTCTCCTGTGGAGTGCGCGGTGTGCCTGAGCGCCATGCAGGACGGGGAC
GCGGTGCGCGCGCTGCCCGGATGCCGGCACGCGTTCCACGTCACCTGCGTCGACGCCTGG
CTCTGCGCACGCGCCACCTGCCCCGTCTGCCGCGCGCGCCCCGCGCTCCCGCCGCCGCAG
CAGGCGCCCAAGGCCGGCGCCATGGTGGCGGGGTCCTCCGGCCGGCACCCGGACCTGGAG
AGCCAAGTGTAG