Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016084_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:143688848:143693327:1 gene:Zm00001d016084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence	ATGGATCGCGATCGCTCCTCACGGCGCACTCGCAACGACGACGGGCACCACCGATCCCGC GGCCGGGACGACGACCGGCACCGCCGCCGTAGTCGCCACGACACCGAGGATCACCAGCAC GACGGTGGAGACGAGGACCGTCGCCACCGCCGCCACCGCGACAAGGACGGTGGCAGAGGC GGCGAGGATGACCGCCGGCACCGTGACCATCACGATAAGGACGACAGCCGTTGCCACCGC TACCGTGACGGCGGTGACGACGATCGCCGCCGCGGGAACCGACGTTCCGTTTCCCCGTCC GAGTCCCCGCCACCCTCGGCGAAGCGGGACCGCTCGTCTAGCCGCCCCCGGGAGCTTGTC GAGCGCCGCGACTCCACCGACCGCGAGCCGCGGTCGCCGTCGCGGAAGAGAAAGGGGCAC GAGGGCGGTGGCGACGGGGACGAGCCCGGCCGCGAAGGGGGCAAGCGGGCCAGGGCCTCC GTAGACCCGCCTCCACCCAAGGAGGAGAGGCCTAGGCGGGAGCGCCGGAGGTTTGAGGAT GTCGGTGCGAATGGGAAGAATGGTGATGTGAGTAAGTCGAGTAAGGAAATCTCATCTCAT GGGCAGAAGGGGGAGTTATCAATTAACGGAGATTCACAGAACGGCAATGGGCCTAATGCT GGTTCTCAGCAACTGCTCAGTGCCGTTCCTATGCCATCTTCTGTTCCCATTCCTTCAAAG GTATCTTCAATTACTACCAACAATGCAAATGAGGGAGTTAGTATTAGATCTGATGAGGTT ACCGTAAAATCTAGTACAGATGGAAGTGCAACATCTGCTGCTGGCAAAAGTAGTAACCTA TCTCTTGATGCTTTAGCCAAAGCAAAAAAAGCTTTGCAACTGAAGAAGGAACTGTCAGAA AAACTCAAGAAATTACCTATGCTTAATAATAAGCTTGGTACATCTGTTACTGCTACACAA GTTTCTAAAGAAGAAGCAAAAACTTCTGTATCAGCTGTAGATGCACAACTCTTTTCTAAA GGAGAAGCAAAACCTACTGATGTTTCTGTTCTGCCAACTAGTACCATCTCTGGAACGCCG GCCGTAGGTGGTGCTATCGGTATTCCAGGTCTTACGAACATTCCCAATCTTGAATCTGTG AAGCGAGCCCAAGAACTTGCTGCTAAGATGGGGTTTCGCCAAGATCCACAATTTGGTCCT CTTATCAACTTATTCCCTGGTACATCCACTGAAGTTACTGTGCCACAAAGGCCTGCAAAG GCTCCTGTTCTTCGCCTTGATGCCCAAGGTAGGGAAATTGATGAGCAGGGAAACGTTATC AGCATGACAAAGCCAACAAATCTGAGTACTCTGAAGGTAAACTTTTATAGATTGCTGTAG

Peptide Sequence

PEP ID	Zm00001d016084_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:143688848:143693327:1 gene:Zm00001d016084 transcript:Zm00001d016084_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence	MDRDRSSRRTRNDDGHHRSRGRDDDRHRRRSRHDTEDHQHDGGDEDRRHRRHRDKDGGRG GEDDRRHRDHHDKDDSRCHRYRDGGDDDRRRGNRRSVSPSESPPPSAKRDRSSSRPRELV ERRDSTDREPRSPSRKRKGHEGGGDGDEPGREGGKRARASVDPPPPKEERPRRERRRFED VGANGKNGDVSKSSKEISSHGQKGELSINGDSQNGNGPNAGSQQLLSAVPMPSSVPIPSK VSSITTNNANEGVSIRSDEVTVKSSTDGSATSAAGKSSNLSLDALAKAKKALQLKKELSE KLKKLPMLNNKLGTSVTATQVSKEEAKTSVSAVDAQLFSKGEAKPTDVSVLPTSTISGTP AVGGAIGIPGLTNIPNLESVKRAQELAAKMGFRQDPQFGPLINLFPGTSTEVTVPQRPAK APVLRLDAQGREIDEQGNVISMTKPTNLSTLKVNFYRLL

Transcript Sequence

Transcript ID	Zm00001d016084_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:143688848:143693327:1 gene:Zm00001d016084 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor 3
Sequence	GAACCCGACTCAAACCCTAGCCCCCTCTCCTTGCCATCCCCGCCCATGGATCGCGATCGC TCCTCACGGCGCACTCGCAACGACGACGGGCACCACCGATCCCGCGGCCGGGACGACGAC CGGCACCGCCGCCGTAGTCGCCACGACACCGAGGATCACCAGCACGACGGTGGAGACGAG GACCGTCGCCACCGCCGCCACCGCGACAAGGACGGTGGCAGAGGCGGCGAGGATGACCGC CGGCACCGTGACCATCACGATAAGGACGACAGCCGTTGCCACCGCTACCGTGACGGCGGT GACGACGATCGCCGCCGCGGGAACCGACGTTCCGTTTCCCCGTCCGAGTCCCCGCCACCC TCGGCGAAGCGGGACCGCTCGTCTAGCCGCCCCCGGGAGCTTGTCGAGCGCCGCGACTCC ACCGACCGCGAGCCGCGGTCGCCGTCGCGGAAGAGAAAGGGGCACGAGGGCGGTGGCGAC GGGGACGAGCCCGGCCGCGAAGGGGGCAAGCGGGCCAGGGCCTCCGTAGACCCGCCTCCA CCCAAGGAGGAGAGGCCTAGGCGGGAGCGCCGGAGGTTTGAGGATGTCGGTGCGAATGGG AAGAATGGTGATGTGAGTAAGTCGAGTAAGGAAATCTCATCTCATGGGCAGAAGGGGGAG TTATCAATTAACGGAGATTCACAGAACGGCAATGGGCCTAATGCTGGTTCTCAGCAACTG CTCAGTGCCGTTCCTATGCCATCTTCTGTTCCCATTCCTTCAAAGGTATCTTCAATTACT ACCAACAATGCAAATGAGGGAGTTAGTATTAGATCTGATGAGGTTACCGTAAAATCTAGT ACAGATGGAAGTGCAACATCTGCTGCTGGCAAAAGTAGTAACCTATCTCTTGATGCTTTA GCCAAAGCAAAAAAAGCTTTGCAACTGAAGAAGGAACTGTCAGAAAAACTCAAGAAATTA CCTATGCTTAATAATAAGCTTGGTACATCTGTTACTGCTACACAAGTTTCTAAAGAAGAA GCAAAAACTTCTGTATCAGCTGTAGATGCACAACTCTTTTCTAAAGGAGAAGCAAAACCT ACTGATGTTTCTGTTCTGCCAACTAGTACCATCTCTGGAACGCCGGCCGTAGGTGGTGCT ATCGGTATTCCAGGTCTTACGAACATTCCCAATCTTGAATCTGTGAAGCGAGCCCAAGAA CTTGCTGCTAAGATGGGGTTTCGCCAAGATCCACAATTTGGTCCTCTTATCAACTTATTC CCTGGTACATCCACTGAAGTTACTGTGCCACAAAGGCCTGCAAAGGCTCCTGTTCTTCGC CTTGATGCCCAAGGTAGGGAAATTGATGAGCAGGGAAACGTTATCAGCATGACAAAGCCA ACAAATCTGAGTACTCTGAAGGTAAACTTTTATAGATTGCTGTAGAGCTTACTATACAAT TTTATCCATATTTTTTACGGTGACTGATACTATCTGGTTCTACCTTGGTTAGGTCAATAT AAACAAGCAGAAGAAAGAGGCTTTTCAAATAATCAAGCCGGACTTGGACTCTCTTGCAAA ATCAAGTGTTCATTTTGATGAACGGATGGGCATAAACCAAAAGAAGCTCCTTCGTCTTAA AAGGCCAGGATTTCAGTTCGTTGAAGAGGGTAAACTCACTAGGCAGGCTGAATTGCAGAA AATTAAGAGTCAATTTGGTGAAGCGCAAGCTAAAGAGCTCAAAGTAAAGCAAGCCCAGCT TGCTAAGGCAAAGACAGAAGTAGACATGAATCCAAACCTTATTGAGGTTGCTCTTGGTGT GAGAGCTCCAAAACAAAAGCAGAAGGAAGAGATCCCTGAAATTGAGCCATGGTTGTTTTT GTTTCCTTTTTGAATGATGTTTTTAAGGTTCTATGTTGTGATTGAACATAAAGTAATTTT TATTGTTGTTTTCAGGGATGCAAAAATTTTACTTTCTGCCACATATGAGGATGTCTCTGT GGAGAAACTTAATTTGGACAAGATCACCATATATGTTGAACATCCAGAACCATATGATCC ACCTGCTGAGCCTGCACCACCGCCGCCCCAGCCACTGAAGTTGACTAAGAAGGAGCAGAA GAAGTTGAGAACACAAAGGCGTCTTGCTAAGGAAAAAGATAGGCAAGAAATGATTAGGCA AGGCCTCTTGGAGCCACCTAAGCCCAAGGTCAAAATGAGCAATCTTATGAAAGTGCTAGG CTCTGAAGCTGTCCAAGATCCCACACGGATGGAGATGGAAATAAGAACTGCGGCTGCAGA GCGTGAGCAGGCTCACGTTGACCGTAACATTGCCCGCAAGCTCACACCATCTGAGCGCCG TGAGAAGAAAGAACGGAAGCTTTTTGATGATCCAACTAACACAGTGGAGACTATAGTTTG TGTTTACAAGATAAGAGACCTGTCCCATCCACAGACACGCTTCAAAGTTGATGTGAATGC ACAAGAGAATAAACTGACAGGTGCTGCGGTCATTACTGATAGTATCAGTGTTGTGGTTGT TGAAGGGGGGAAAAAGTCAATCAAAAGGTATAATAAGCTCATGCTAAACCGTATAGATTG GGCTGCTGCTGTTGGTGGTGATGAAGACGCAGAAGCAGAAGCGGAAGCTGACAAGCCAGT GAATAGCTGTGAATTGGTCTGGCAGGGTAGTGTGGCAAAGCCCACCTTCCACAGGTTCAC TGTACATAACTGCCGGAGTGAATCTGCAGCTAAGAAGATATTCGTTGATGCTTCTGTTCC TCACTACTGGGATCTTGCTGTCAATTCCTCGGAGGGTTCTCCCTGAGCAAAGCACCTGTT CAGAACCTTGGTAGCTACTGCTGATCTTTGCTGGCTACATGCTAGTTATGTGTGGCCAGT GTTATAGCGCTTGTTATGGTAAGACCCTTACCACGAGTATCTACATCAATGGCCTCATCA GTTGAAGTACTGAACTCAGTAATGCCTGGTGTTAGTCTGTTGTGAACATGCTATTTCAGA GATGTTATTGTTGGATTTTCCTGTGGCCTAGAAACTGTTATGTGAGCAACTGTTGAATTT TGCACGCTCAGCGTGCATTTGGAATAAACCAATTGC