Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016082_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:143463525:143465976:1 gene:Zm00001d016082 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HMG-transcription factor 9 description:High mobility group B protein 6
Sequence	ATGGCGACCGCCGCGGTGGAGAGCAAGAGGGGCAGCGCCCGGGGCCGCAAGGCGCTCGTG GCCGTGCTCGACAACGAGGCTAACATCTCCGCCGGGAAGGCCGCCCAGGCCGCCGATCTC TCGTCCTGCTCAGCGCAGAAGAAGGCGAAGCGGGCGCCGTCAAGGAGCAGCAAGGCCAAG GCCGCCGCGGCGTCGGCGGCCGTGGTCGTGGACGACATAGCCGAGCTGCAGGGGATGCTA GAGCGCCTGCGGCTGGAGAAGGAGAAGGCGGAGGAGATGGTTAGGGAGCGGGATGAGGTC ATCCGGAAGAAGGAGGAGGAGATCGAGACCAGAGACAAGGAGCAGGAGCGTCTCCAGGCC GAGCTCAGGAAGGCGCAACGCGCCAAGGAGTTCAAGCCTACCGTGAGCTTCCCCCTCGTC AAGTCGTTGCTGGAGAAAGAGCAAGAAGCAGACGACAAGGGAAAGAAGAAGAAGGGGAAG GGCGGCCACGAGAGGAAGAAGCCGTGCCCGGCGTACGTGCTCTGGCTCAAGGACCAGTGG ACCGAGGTCAAGAAGGAGAACCCTGAGGCCGACTTCAAGGAGGTGTCCAACACGCTGGGC GCCAAGTGGAAGGCTCTGGGCGCCGAGGAGAAGCAGCCCTATGAGGATCGATACCGCCAG GAGAAGGAGGCCTACCTGCAGGTGGTTGGCCAGGAGAAGCGCGAGGCCGAGGCGATGAAG CTTCTCGAGGAGCAGCAGATGCAGTGGACCGCCAAGGAGCTGCTGGATCAGTACCTCAAG TTCAGGCAGGAGGCCGAGGAGGGTGACTGCAAGAAGGGGAGGAAGAAGAAGAGCAAGAAG GATAAGGACCCCTCCAAGCCCAAGCAGCCCATGTCGGCCTACTTCGTGTACTCGCAGGAG AGGCGTGCCACGCTGGTCGCGGAGAAGAAGAATGTACCTGAGATTGGCAAGATCACCGGG GAAGAATGGAAGAACATGACAGAAGGTCAGAGGGCTCCCTATGAGGAGGTCGCGAGGAAG CAGAAGGAAGAGTACCACAAGCAGATGGAGGTGTACAAGCAGAAGAAGGCTGAGGAAGCT GCTAGTCTTGAGAAGGAAGAGCAGGAGCATAAGAAAATCATGAAGCATGAGGCTCTCCAG CTGCTCAAGAAGAAGGAGAAGGCAGATAATATCATCAAGAAAACCAAAGAAAAGCGCCAG AAGAAGAAACAGGAGAACGCTGATCCCAACCGGCCCAAGAGGCCAGCCTCTTCCTTTCTT CTTTTCAGCAAGGAAGAGAGGAAACAGCTGATCGAGGAACGCCCGGGCATCAATAACTCA ACCCTGAACGCGCTCATCACGGTGAAGTGGAAGGAACTGAGCGGCGAGGAGAGGCAGGCC TGGAATGCAAAGGCCGCGCCTGCCATGGCTGCGTACAAGAAGGAGATGGAGGAGTACACT AAGGCCCAAAGCTCATCTGCTTGA

Peptide Sequence

PEP ID	Zm00001d016082_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:143463525:143465976:1 gene:Zm00001d016082 transcript:Zm00001d016082_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HMG-transcription factor 9 description:High mobility group B protein 6
Sequence	MATAAVESKRGSARGRKALVAVLDNEANISAGKAAQAADLSSCSAQKKAKRAPSRSSKAK AAAASAAVVVDDIAELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEIETRDKEQERLQA ELRKAQRAKEFKPTVSFPLVKSLLEKEQEADDKGKKKKGKGGHERKKPCPAYVLWLKDQW TEVKKENPEADFKEVSNTLGAKWKALGAEEKQPYEDRYRQEKEAYLQVVGQEKREAEAMK LLEEQQMQWTAKELLDQYLKFRQEAEEGDCKKGRKKKSKKDKDPSKPKQPMSAYFVYSQE RRATLVAEKKNVPEIGKITGEEWKNMTEGQRAPYEEVARKQKEEYHKQMEVYKQKKAEEA ASLEKEEQEHKKIMKHEALQLLKKKEKADNIIKKTKEKRQKKKQENADPNRPKRPASSFL LFSKEERKQLIEERPGINNSTLNALITVKWKELSGEERQAWNAKAAPAMAAYKKEMEEYT KAQSSSA

Transcript Sequence

Transcript ID	Zm00001d016082_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:143463525:143465976:1 gene:Zm00001d016082 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HMG-transcription factor 9 description:High mobility group B protein 6
Sequence	ACCGAAAACACACCATCTCCACCTCGCCGCCGCCGCTCGGATTTCCCTCTACCTCACCCT GTCCGGCTCCATGGCGACCGCCGCGGTGGAGAGCAAGAGGGGCAGCGCCCGGGGCCGCAA GGCGCTCGTGGCCGTGCTCGACAACGAGGCTAACATCTCCGCCGGGAAGGCCGCCCAGGC CGCCGATCTCTCGTCCTGCTCAGCGCAGAAGAAGGCGAAGCGGGCGCCGTCAAGGAGCAG CAAGGCCAAGGCCGCCGCGGCGTCGGCGGCCGTGGTCGTGGACGACATAGCCGAGCTGCA GGGGATGCTAGAGCGCCTGCGGCTGGAGAAGGAGAAGGCGGAGGAGATGGTTAGGGAGCG GGATGAGGTCATCCGGAAGAAGGAGGAGGAGATCGAGACCAGAGACAAGGAGCAGGAGCG TCTCCAGGCCGAGCTCAGGAAGGCGCAACGCGCCAAGGAGTTCAAGCCTACCGTGAGCTT CCCCCTCGTCAAGTCGTTGCTGGAGAAAGAGCAAGAAGCAGACGACAAGGGAAAGAAGAA GAAGGGGAAGGGCGGCCACGAGAGGAAGAAGCCGTGCCCGGCGTACGTGCTCTGGCTCAA GGACCAGTGGACCGAGGTCAAGAAGGAGAACCCTGAGGCCGACTTCAAGGAGGTGTCCAA CACGCTGGGCGCCAAGTGGAAGGCTCTGGGCGCCGAGGAGAAGCAGCCCTATGAGGATCG ATACCGCCAGGAGAAGGAGGCCTACCTGCAGGTGGTTGGCCAGGAGAAGCGCGAGGCCGA GGCGATGAAGCTTCTCGAGGAGCAGCAGATGCAGTGGACCGCCAAGGAGCTGCTGGATCA GTACCTCAAGTTCAGGCAGGAGGCCGAGGAGGGTGACTGCAAGAAGGGGAGGAAGAAGAA GAGCAAGAAGGATAAGGACCCCTCCAAGCCCAAGCAGCCCATGTCGGCCTACTTCGTGTA CTCGCAGGAGAGGCGTGCCACGCTGGTCGCGGAGAAGAAGAATGTACCTGAGATTGGCAA GATCACCGGGGAAGAATGGAAGAACATGACAGAAGGTCAGAGGGCTCCCTATGAGGAGGT CGCGAGGAAGCAGAAGGAAGAGTACCACAAGCAGATGGAGGTGTACAAGCAGAAGAAGGC TGAGGAAGCTGCTAGTCTTGAGAAGGAAGAGCAGGAGCATAAGAAAATCATGAAGCATGA GGCTCTCCAGCTGCTCAAGAAGAAGGAGAAGGCAGATAATATCATCAAGAAAACCAAAGA AAAGCGCCAGAAGAAGAAACAGGAGAACGCTGATCCCAACCGGCCCAAGAGGCCAGCCTC TTCCTTTCTTCTTTTCAGCAAGGAAGAGAGGAAACAGCTGATCGAGGAACGCCCGGGCAT CAATAACTCAACCCTGAACGCGCTCATCACGGTGAAGTGGAAGGAACTGAGCGGCGAGGA GAGGCAGGCCTGGAATGCAAAGGCCGCGCCTGCCATGGCTGCGTACAAGAAGGAGATGGA GGAGTACACTAAGGCCCAAAGCTCATCTGCTTGACAGAATAACTAATTCCTGCGAGTGAG CTTTGGTTACAAGGATCCTCATCTCTGAATCCTGGTGTGGTAGATTACTTCGTGTGATCT TTAGCTTTGTGTGACCTTATTAGTCGCAGCAATCAGTGTAATGGCGGTTCATATGGTTTA GTGGCAGTTTATATTGTTGCCACGGGCCCAGGAATTGAGTAATCTTTCAGTTCTGACATT TGCTGAAATGGAGAGTTCTAATGGAGGGGCCGAGGGGGCAGCCATGGGATATTAGACCCC TCTACTCAGTCGGCATCTGCCGTGATGATGGAGATGGACACCGGCAATGTCTGTTTGACA CGAAATGTTTCATCGCCAAAATTATCAAATACTGAATTAATTTGAACGCT