Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016081_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:143453647:143456100:1 gene:Zm00001d016081 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extra-large G-protein-like; protein
Sequence

ATGAACAACCCTGTAGAAGGCCCGGTGGTGTTTGGTGCACAGAACTACAATCCAAGAGGT
ATTAATGGTCTGATGCGACACAATCATCTGAGGGACACCCTGAGTAAAAAACCTGCACAG
ACTTGTGAACCAATTGCCAATGGTGCCCCTTTTACCATATGCTACAATTGCTATGAAGTA
CTGCATCTTCCCAAGAATTCTCTCATGCTGGGAAAAGATGAGTACAAGCTGCGCTGTGGG
TCATGTTCACATGCAATTGTGGTCAGACTTGATGGAAACAGGCTTGATGTTTCAGCACCT
ACACCAGTTTCACACTTATCACCTGGAAGTAAAAATTACTCCAACAATGGCCAAGGAAGC
AATGGACAAAATGCTGACGAGAGACTTCTTCCATCTTATAGCTTTTCTGCAGGCAGTCAT
TTCTCTCAAGAAAAAGATTTACCATCGAATTCCAGTGAAGCAGACAAAATGCAATGCATA
TCATCTTCCGCCAGCATTTCTGAGGATGATAATAGCCGAGCTAGTTCTAACTCACAGAAG
AACTCTGGATCTAGAGACCTTCCTCCTGATGCTGAAGTGGTTATACGTGTTCCAAGTTTG
CCTCTTCGTGATCATTTTGGATATTCTCCATCAGAGATGGTGGTTGATGGGTCAGGCAAA
GGAAGCAGAAGCACCCGGTCTGAACATGAGAAGGGTGTGTTAACTGAAAGTTTTAAGCCA
AACAAAGTGAAAGATGTACCTGTAGCAAGCGTGCTAGACCCATCAGATGATGAGTTTGAT
GATCCTGAGTACAATCAAGATCCAGGTGACGGAGCACAATGCGTCGATCACCCAAGGGCC
ACAAAATCGGGCGACTCCTTTTTCTCCAGCCTGATAAAAAAGAGCTTTAAAATTAACGGT
GGGATGGGCAATGGCAGAGCAAAGGTGTTCATCAATGGCTATCCCATTTCTGATCGTGCT
GTGAGGAAGGCGGAGAAGATTGCTGGACCAATCTATCCGGGTGAATACTGGTATGACTAC
CGTGCTGGATTCTGGGGTGTCATAGGACAGCCCTGCCTTGGCATGATACCCCCATACATT
GCAGAATTTAACTATCCTATGCCTAAGAACTGTGCTGGCGGAAATACTGGTGTGTTCATC
AACAGCCGAGAACTTCACCAGAAGGACTTGGATTTACTTGTGGGTCGAGGGCTTCCTGAT
TCTCCTGATAGATCATACAGAGTTGAGATTTCTGGTAAAGTATCCGACGAAGTATCCGGT
GAAGAGCTTTATTGCCTTGGTAAACTCGCACCAACCAGGGTGGAGAAGATGAAGCGTGGG
TTCGGGATGCGAGTCCCAAGGACCATTCAGTGA

Peptide Sequence

PEP ID

Zm00001d016081_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:143453647:143456100:1 gene:Zm00001d016081 transcript:Zm00001d016081_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extra-large G-protein-like; protein
Sequence

MNNPVEGPVVFGAQNYNPRGINGLMRHNHLRDTLSKKPAQTCEPIANGAPFTICYNCYEV
LHLPKNSLMLGKDEYKLRCGSCSHAIVVRLDGNRLDVSAPTPVSHLSPGSKNYSNNGQGS
NGQNADERLLPSYSFSAGSHFSQEKDLPSNSSEADKMQCISSSASISEDDNSRASSNSQK
NSGSRDLPPDAEVVIRVPSLPLRDHFGYSPSEMVVDGSGKGSRSTRSEHEKGVLTESFKP
NKVKDVPVASVLDPSDDEFDDPEYNQDPGDGAQCVDHPRATKSGDSFFSSLIKKSFKING
GMGNGRAKVFINGYPISDRAVRKAEKIAGPIYPGEYWYDYRAGFWGVIGQPCLGMIPPYI
AEFNYPMPKNCAGGNTGVFINSRELHQKDLDLLVGRGLPDSPDRSYRVEISGKVSDEVSG
EELYCLGKLAPTRVEKMKRGFGMRVPRTIQ

Transcript Sequence

Transcript ID

Zm00001d016081_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:143453647:143456100:1 gene:Zm00001d016081 gene_biotype:protein_coding transcript_biotype:protein_coding description:Extra-large G-protein-like; protein
Sequence

AAACCAGGATTCATATATGCTAGCGGTGAGAAGGGACATCTGAGTGACAAGAATTTAGAT
GTTCCTAGCACCAGAGCCGGTGGCCTTGAGAAAGACCGTACTGAGCTTCTGCGGATGCTC
GATGAGTTGAGGGACCAGGTACAGAGATCCTACGAGATTGCTGACAAGTCAAGTGTGAAT
GCTTCAACAAATAGAATGGTGGATCCTGCAAGCTCCTACAATCCTCATGAGCGTCTGAGT
CGATTGCGGTATGGTTCACCTCAGTTGCAGCGTAATGGTTCTCAGTGCTCACCTTCTTTG
AATGGACAGGCACCTGTTGTTCCTCCTGCTTATCCTTCAGTATCTGTACAGCAAGATCTC
CATGGATACGGACAATCTGTTGCACATATGGGAGCTCCTATTTACCCAGCCGCCCCTTAT
CCATGGAGAAACTTCGATAACTATTTCCATGGACAGTATGATCCTGACCCTCTGATCTCT
TATCACCATGACGGCTTCTACCATCAGCCTGCTTGCTCTTGCTTACATTGTTACCATCGT
GAATTATTACCTGTTCATGGGCACCATATCTTATGAACAACCCTGTAGAAGGCCCGGTGG
TGTTTGGTGCACAGAACTACAATCCAAGAGGTATTAATGGTCTGATGCGACACAATCATC
TGAGGGACACCCTGAGTAAAAAACCTGCACAGACTTGTGAACCAATTGCCAATGGTGCCC
CTTTTACCATATGCTACAATTGCTATGAAGTACTGCATCTTCCCAAGAATTCTCTCATGC
TGGGAAAAGATGAGTACAAGCTGCGCTGTGGGTCATGTTCACATGCAATTGTGGTCAGAC
TTGATGGAAACAGGCTTGATGTTTCAGCACCTACACCAGTTTCACACTTATCACCTGGAA
GTAAAAATTACTCCAACAATGGCCAAGGAAGCAATGGACAAAATGCTGACGAGAGACTTC
TTCCATCTTATAGCTTTTCTGCAGGCAGTCATTTCTCTCAAGAAAAAGATTTACCATCGA
ATTCCAGTGAAGCAGACAAAATGCAATGCATATCATCTTCCGCCAGCATTTCTGAGGATG
ATAATAGCCGAGCTAGTTCTAACTCACAGAAGAACTCTGGATCTAGAGACCTTCCTCCTG
ATGCTGAAGTGGTTATACGTGTTCCAAGTTTGCCTCTTCGTGATCATTTTGGATATTCTC
CATCAGAGATGGTGGTTGATGGGTCAGGCAAAGGAAGCAGAAGCACCCGGTCTGAACATG
AGAAGGGTGTGTTAACTGAAAGTTTTAAGCCAAACAAAGTGAAAGATGTACCTGTAGCAA
GCGTGCTAGACCCATCAGATGATGAGTTTGATGATCCTGAGTACAATCAAGATCCAGGTG
ACGGAGCACAATGCGTCGATCACCCAAGGGCCACAAAATCGGGCGACTCCTTTTTCTCCA
GCCTGATAAAAAAGAGCTTTAAAATTAACGGTGGGATGGGCAATGGCAGAGCAAAGGTGT
TCATCAATGGCTATCCCATTTCTGATCGTGCTGTGAGGAAGGCGGAGAAGATTGCTGGAC
CAATCTATCCGGGTGAATACTGGTATGACTACCGTGCTGGATTCTGGGGTGTCATAGGAC
AGCCCTGCCTTGGCATGATACCCCCATACATTGCAGAATTTAACTATCCTATGCCTAAGA
ACTGTGCTGGCGGAAATACTGGTGTGTTCATCAACAGCCGAGAACTTCACCAGAAGGACT
TGGATTTACTTGTGGGTCGAGGGCTTCCTGATTCTCCTGATAGATCATACAGAGTTGAGA
TTTCTGGTAAAGTATCCGACGAAGTATCCGGTGAAGAGCTTTATTGCCTTGGTAAACTCG
CACCAACCAGGGTGGAGAAGATGAAGCGTGGGTTCGGGATGCGAGTCCCAAGGACCATTC
AGTGAAATTGGTTCACATCGAGAAGCAGAGGCTCTGAGATCTGTGTGCTGCCACGCCTTT
GTGCTAGAGATTGCTAATGTCACCCCGCCTTGAATCGTTGCATCTGTCGTAGTGGCTGTT
TTGATCGAGTGTGTCATGGTGTGACCATGTAATTTTGTCTGT