Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016072_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:142984239:142988360:1 gene:Zm00001d016072 gene_biotype:protein_coding transcript_biotype:protein_coding description:50S ribosomal protein L21 chloroplastic
Sequence

ATGCGTCCCCTCCCCGCCGCGGCCATGGCCACCGCGACGCTGCCCCTCCGCCTCCTCCCC
TCCAAAACGCTGACTCTCTCCACTCTCCCCTCCCTGCGCCGCTCCCTCTCCGTCGCCGCT
TTGGAGCCCCGGCGCTGGCGCCTCCGAGCCGCCGCCGAGGAGGCGCCTGAGGCCGTGGAG
GTTGAGTTCGTGGAGCCCGAGACGGAGGCTGAGGAGAAACCCGCGGTACCGGAGCCCATC
GAGGCTCAGCTGGCCGCCGCGGGGGCCGGGAAGGACGCGGACATCTTCGCTGTTGTCATG
ATTGGTTCAAGACAGTACATAGTGATGCCGGGCAGGTATATATACACACAGAGACTGAAA
GGTGCCAATGTCAATGATCAGATCATATTAAACAAGGTGCTACTGGTGTCAACTAGAGAA
AAAGCTTACATTGGGATGCCAGTGGTGACCAATGCTGCTGTTCACGCAGTGGTTGAAGAA
CAGGGACGGGATGATAAAGTTATAGTGTTCAAGTACAAGAAGAAGAAGAAGTACCAGAGG
AAACTTGGTCACAGACAGCCAAACACAAGGTTAAGAATCACAGGCATAAGTGGATACGAA
GAGTACCCTGCTGACCCAATACTTGACCCTGCTGCAGCTTTAAATTAA

Peptide Sequence

PEP ID

Zm00001d016072_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:142984239:142988360:1 gene:Zm00001d016072 transcript:Zm00001d016072_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:50S ribosomal protein L21 chloroplastic
Sequence

MRPLPAAAMATATLPLRLLPSKTLTLSTLPSLRRSLSVAALEPRRWRLRAAAEEAPEAVE
VEFVEPETEAEEKPAVPEPIEAQLAAAGAGKDADIFAVVMIGSRQYIVMPGRYIYTQRLK
GANVNDQIILNKVLLVSTREKAYIGMPVVTNAAVHAVVEEQGRDDKVIVFKYKKKKKYQR
KLGHRQPNTRLRITGISGYEEYPADPILDPAAALN

Transcript Sequence

Transcript ID

Zm00001d016072_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:142984239:142988360:1 gene:Zm00001d016072 gene_biotype:protein_coding transcript_biotype:protein_coding description:50S ribosomal protein L21 chloroplastic
Sequence

CTCCACTCCTTCGTCATCCATGCGTCCCCTCCCCGCCGCGGCCATGGCCACCGCGACGCT
GCCCCTCCGCCTCCTCCCCTCCAAAACGCTGACTCTCTCCACTCTCCCCTCCCTGCGCCG
CTCCCTCTCCGTCGCCGCTTTGGAGCCCCGGCGCTGGCGCCTCCGAGCCGCCGCCGAGGA
GGCGCCTGAGGCCGTGGAGGTTGAGTTCGTGGAGCCCGAGACGGAGGCTGAGGAGAAACC
CGCGGTACCGGAGCCCATCGAGGCTCAGCTGGCCGCCGCGGGGGCCGGGAAGGACGCGGA
CATCTTCGCTGTTGTCATGATTGGTTCAAGACAGTACATAGTGATGCCGGGCAGGTATAT
ATACACACAGAGACTGAAAGGTGCCAATGTCAATGATCAGATCATATTAAACAAGGTGCT
ACTGGTGTCAACTAGAGAAAAAGCTTACATTGGGATGCCAGTGGTGACCAATGCTGCTGT
TCACGCAGTGGTTGAAGAACAGGGACGGGATGATAAAGTTATAGTGTTCAAGTACAAGAA
GAAGAAGAAGTACCAGAGGAAACTTGGTCACAGACAGCCAAACACAAGGTTAAGAATCAC
AGGCATAAGTGGATACGAAGAGTACCCTGCTGACCCAATACTTGACCCTGCTGCAGCTTT
AAATTAAACTGTAAGTTATGTAGTTACAAAACGGCTGGTAGTAGAGTAGCATGCTAGTTT
TCTTGTTTCTTTCTTTTTTTACTTCTCTGTCTTGAAAAAGGAACACTTTTCATCACAATT
TTCCTTGTTTTTGTGTGTTCCAAATGCTGCCAGTCAACCAACTGTACCATGAGCTATCTT
GTTCTTGTTCTTTTTTCACATCGTGTATGCTACTAGCCAGTTGTATTGCACGACCGGTCC
TAAAGAAGAGGTTTCTTTCT