Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d016034_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:140715515:140719221:1 gene:Zm00001d016034 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cell division cycle202 description: cell division cycle202
Sequence

ATGGACGCAGGAACCTACTCCATCTCATCAGAGAAGAGCCACACGGCGGCAGCGGCGCGG
CCCCCTCTTCAGGAGGCCGGCACTCGGCCCTACATGCCGTCGCTGAGCACAGGATCGCGC
AACCCGTCGGCCAAGTGCTACGGCGATAGGTTCATCCCGGACAGGTCGGCGATGGATATG
GACATGGCGCACTACCTGCTCACGGAGCCCAGGAGGGACAAGGAGAACGCGGTGGCAGCG
TCCCCATCCAAGGAGGCGTACCGGAGGCTGCTCGCCGAGAAGTTGCTCAACAACCGGACA
CGCATCCTTGCCTTCAGGAACAAGCCGCCTGTGTCTGAGAACGTCTCGGCAGCCATCACA
GCTTCCTCTCACCATGCCAAGCTGGTCAAGCAGCGTCGACATATTCCCCAGTCTGCAGAG
AGGACTCTGGACGCACCAGAGCTTGTTGACGACTACTACCTCAACCTGCTTGACTGGGGG
AGCAACAACGTGCTATCCATTGCTCTGGGCGACACGGTATACCTGTGGGATGCCTCCAGT
GGATCCACGTCTGAGCTTGTGACCATTCACGAGGACAGTGGTCCCATCACCAGCGTCAAC
TGGGCTCCAGATGGCCACCATATCGCTATTGGGCTCAACTCATCCGATATCCAGCTCTGG
GACACCAGCTCCAACCGACTGTTGAGAACTCTCAGAGGTGTGCATGAGGAAAGAGTTGGC
TCACTGGCATGGAACAACAACATCCTCACCACTGGCAGTATGGATGGCAAGATCGTGAAC
AACGACGTGAGAATTAGGAACCATGTTGTACAGACATACGAGGGGCACAGCCAGGAGGTG
TGTGGGCTCAAGTGGTCTGGATCAGGGCAGCAGCTGGCTAGTGGGGGTAATGACAACCTT
CTGCACATTTGGGATGTGTCGATGGCATCCCCCATGTCAACCGCTGGCCGCAACCAGTGG
CTGCACAGGCTCGAGGACCACATGTCCGCTGTGAAGGCACTCGCGTGGTGTCCTTTCCAG
AGCAACTTGCTGGCAACTGGTGGTGGCGGCAGTGATAGATGCATCAAGTTCTGGAACACA
CACACTGGAGCATGTCTGAACTCTGTTAACACTGGATCACAGGTCTGTGCCCTTCTATGG
AACAAAAATGAGAGAGAGCTGCTGAGCTCACACGGATTCACACAGAACCAACTAACCTTG
TGGAAGTACCCATCAATGGTAAAGATGGCTGAACTCAGTGGCCATACCTCTCGTGTCCTT
TTCATGGCTCAGAGCCCTGATGGTTGCACAGTAGCATCAGCCGCTGCGGATGAGACCCTT
CGGTTCTGGAACGTATTTGGAGACCCTGAAGTGGCCAAGCCTGCAGCCAAGGCTTCCCAC
ACTGGGATGTTCAACAGCTTCAACCATATTCGATAG

Peptide Sequence

PEP ID

Zm00001d016034_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:140715515:140719221:1 gene:Zm00001d016034 transcript:Zm00001d016034_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cell division cycle202 description: cell division cycle202
Sequence

MDAGTYSISSEKSHTAAAARPPLQEAGTRPYMPSLSTGSRNPSAKCYGDRFIPDRSAMDM
DMAHYLLTEPRRDKENAVAASPSKEAYRRLLAEKLLNNRTRILAFRNKPPVSENVSAAIT
ASSHHAKLVKQRRHIPQSAERTLDAPELVDDYYLNLLDWGSNNVLSIALGDTVYLWDASS
GSTSELVTIHEDSGPITSVNWAPDGHHIAIGLNSSDIQLWDTSSNRLLRTLRGVHEERVG
SLAWNNNILTTGSMDGKIVNNDVRIRNHVVQTYEGHSQEVCGLKWSGSGQQLASGGNDNL
LHIWDVSMASPMSTAGRNQWLHRLEDHMSAVKALAWCPFQSNLLATGGGGSDRCIKFWNT
HTGACLNSVNTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVL
FMAQSPDGCTVASAAADETLRFWNVFGDPEVAKPAAKASHTGMFNSFNHIR

Transcript Sequence

Transcript ID

Zm00001d016034_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:140715515:140719221:1 gene:Zm00001d016034 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cell division cycle202 description: cell division cycle202
Sequence

ACAACGGCTTTCTCTCCCTGCTTCCCTCTCCCTGCTTCCCTCCTGCTACAAATAAAAATT
CGTGGGGCGGCCAAACCCTAAAACGCCCCACAGCGCAAGCGAGCAGATCCTCCTCCCTTT
CTGCTTCCTGGCATCCTCTCTGCCTCCCCGCGCCGATCTCGAGCACCTGGGGAGACCGCG
AGACGTGCGCCTGATTTTTCTCATCGCAGCAGCCCTCAAGTTCCCCACCTCTTTTTTCTT
GCAGCTTTCAATTAATCTGGTTATTTAGCTACATCTTTATTTTACTTTCATTTTACCTTT
AATCTGTTTAGTTCCATTGCATCTTCTGCGGTTGCGGTTAGTATTGCTGTTTCTTGCTCC
TTGTTTCTTGTTCTTTTGCTTCTAACCATGGACGCAGGAACCTACTCCATCTCATCAGAG
AAGAGCCACACGGCGGCAGCGGCGCGGCCCCCTCTTCAGGAGGCCGGCACTCGGCCCTAC
ATGCCGTCGCTGAGCACAGGATCGCGCAACCCGTCGGCCAAGTGCTACGGCGATAGGTTC
ATCCCGGACAGGTCGGCGATGGATATGGACATGGCGCACTACCTGCTCACGGAGCCCAGG
AGGGACAAGGAGAACGCGGTGGCAGCGTCCCCATCCAAGGAGGCGTACCGGAGGCTGCTC
GCCGAGAAGTTGCTCAACAACCGGACACGCATCCTTGCCTTCAGGAACAAGCCGCCTGTG
TCTGAGAACGTCTCGGCAGCCATCACAGCTTCCTCTCACCATGCCAAGCTGGTCAAGCAG
CGTCGACATATTCCCCAGTCTGCAGAGAGGACTCTGGACGCACCAGAGCTTGTTGACGAC
TACTACCTCAACCTGCTTGACTGGGGGAGCAACAACGTGCTATCCATTGCTCTGGGCGAC
ACGGTATACCTGTGGGATGCCTCCAGTGGATCCACGTCTGAGCTTGTGACCATTCACGAG
GACAGTGGTCCCATCACCAGCGTCAACTGGGCTCCAGATGGCCACCATATCGCTATTGGG
CTCAACTCATCCGATATCCAGCTCTGGGACACCAGCTCCAACCGACTGTTGAGAACTCTC
AGAGGTGTGCATGAGGAAAGAGTTGGCTCACTGGCATGGAACAACAACATCCTCACCACT
GGCAGTATGGATGGCAAGATCGTGAACAACGACGTGAGAATTAGGAACCATGTTGTACAG
ACATACGAGGGGCACAGCCAGGAGGTGTGTGGGCTCAAGTGGTCTGGATCAGGGCAGCAG
CTGGCTAGTGGGGGTAATGACAACCTTCTGCACATTTGGGATGTGTCGATGGCATCCCCC
ATGTCAACCGCTGGCCGCAACCAGTGGCTGCACAGGCTCGAGGACCACATGTCCGCTGTG
AAGGCACTCGCGTGGTGTCCTTTCCAGAGCAACTTGCTGGCAACTGGTGGTGGCGGCAGT
GATAGATGCATCAAGTTCTGGAACACACACACTGGAGCATGTCTGAACTCTGTTAACACT
GGATCACAGGTCTGTGCCCTTCTATGGAACAAAAATGAGAGAGAGCTGCTGAGCTCACAC
GGATTCACACAGAACCAACTAACCTTGTGGAAGTACCCATCAATGGTAAAGATGGCTGAA
CTCAGTGGCCATACCTCTCGTGTCCTTTTCATGGCTCAGAGCCCTGATGGTTGCACAGTA
GCATCAGCCGCTGCGGATGAGACCCTTCGGTTCTGGAACGTATTTGGAGACCCTGAAGTG
GCCAAGCCTGCAGCCAAGGCTTCCCACACTGGGATGTTCAACAGCTTCAACCATATTCGA
TAGGAACAAGTCATGAGAACGATCCCTTCTGTTGGAAATGGCCGTGCATCATATGTGAGG
TCGATTCCTATTGATGAGATCTATCCACATTGAGTAAGCACACAACATCAGCGAGCATTG
CCATCATATGCATCATTCAGCGATGCTAATCAGAAATCCAGGATCAGGGCCGTAAAAGGG
TTGGACTATATGTATCTGCAACATCGCAAGCAACAGGGAGGCTGTCTCTTCAGAAATTTT
CAAGAGGACGTGTCAGAAACATACTCAGGAGGCCGTCTCTTCATTCAAAGAGTATCTTTT
ACACGACTTCTTGAGTATAAAAAACTCATTTGTACAATCCTACCTGTCTATTGAATTGTC
TTTAGAAAAAAAAAAGAGACTTTATTGTATGTACTTTTTTTATCTTTTATGTCTGAAGAA
CTGTTTTCCCCTTTTCTTTTAGAAGTAGGAGCCGGTAAAGCTACTCTTTCAATTTGTCAC
AAGCATTATTTATTTTTATAATTTGTCCTCTGTTTCCTTGATTTCACATCCTCTTATGAC
ATGTTTGGCTGAAGAGCAGAGGAAAATGGAGCAGAATCATTACTATTTTCTGGATGTTTA
GGAAATTTATCATAAATACTTGGAATGCTTCTGTTCCATTAAAACGACTGGATGAGAGCG
TTCTCCTTCCATGTACATCCATATAGCTCTCCAATCCAACAAAGAACGAAGTCCATCCAA
CAAAAGGACTAAGGGACTTTGTTCTATTCTGCTCTTCAT