Plant GARDEN How To ▶︎

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Zea mays

CDS Sequence

CDS ID

Zm00001d016014_T001

CDS Infomation

cds chromosome:B73_RefGen_v4:5:139697094:139700302:1 gene:Zm00001d016014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase B

Sequence

ATGGGAAGCGCTCCCGTGAACGTCTGCGTGTCTCGACGCGGGCAGCAAGCGGAAGGGCCT
GCCGCAGTGCTGGCCATTGGCACGGCCAATCCGCCGCACTGCGTGCATCAGGACGAGTTC
CCAGACTACTACTTCCGCATGTCCAGGAGCGAGCATCTCACCGACCTCAAGGTCAAGCTC
AAGAGAATATGTGAGAAATCAGGAATAGAGAAACGCTTCTTCCACATCAACGAGGAAATA
CTGGCCGCCCATCCGGACTTCAACGACCGAGAGAAGCCGTCGCTCCAAGCCCGAATCGAG
ATGACGGTAACGGAAGTCCCCAAGCTCGCCGCGCGCGCCGCCGCCAAGGCCATCGCGGAG
TGGGGCCGCCCAGCCACGGACATCACGCACGTCGTGTTCAGCACATACTCCGGCGCGAGG
TCCCCGAGCGCGGACCTCCGCCTGGCGTCGCTTCTGGGCCTGCGGCCCTCCGTGTGCCGT
ACCACGCTGAGCCTCCACGGCTGCTCGGGGGGCGTCCGGGCGCTCCACCTGGCCAAAGAC
ATCGCCGAGAACAACCACGGCGCGCGGGTCCTCGTGGTCTGCGCCGAGGTTTCCCTCATC
TCCTACAGCGGCCCCACGGACGGCTGCGTGGACTCTGTCCTCGGCCTGGCACTGTTCGGC
GACGGCGCCGGCGCCGTCATCCTGGGCGCCGGCCCCGTCTCCGGCTCGGAGCGGCCGCTG
TTCGAGACCGTGTGCGCCGCGCAGACGACCGTGCCGATGACCGAGGCCGCGATCACCACG
CAGTTCGCGCCAGGCGGCATGGAGTACCGCATCGGCAAGCAGGTTCCGGGGATCGTGGAG
CAGACTATCAGGCAGTGCCTGCTCGACGTCACTGGGCCGCTCGGCATCGACGTGGTGACA
TGGAACGACCTCTTCTGGGCGGTGCACTGTGGAGGCCGCGCCATCTTGGACAGCGTTGAG
GCAGCTCTCGGACTGGGATCTCAGAAGCTAGCAGCCAGTCGCCATGTGCTGAGAGAGTAC
GGCAATATGAGTTCCGCAGCCGTCGTCTTTGTGCTCGAGGAGGTTCACCGCCGACTGACG
TCCAAGAACGCTGACGGGGAGACTGCCGAGTGGGGGGTCATGGTAGCGTTCGGACCGGGG
GTCACAGTTGAGATAATGGTCCTGCGTGCCACGACAAACCTCGAGGAGAAGTAG

Peptide Sequence

PEP ID

Zm00001d016014_P001

PEP Infomation

pep chromosome:B73_RefGen_v4:5:139697094:139700302:1 gene:Zm00001d016014 transcript:Zm00001d016014_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase B

Sequence

MGSAPVNVCVSRRGQQAEGPAAVLAIGTANPPHCVHQDEFPDYYFRMSRSEHLTDLKVKL
KRICEKSGIEKRFFHINEEILAAHPDFNDREKPSLQARIEMTVTEVPKLAARAAAKAIAE
WGRPATDITHVVFSTYSGARSPSADLRLASLLGLRPSVCRTTLSLHGCSGGVRALHLAKD
IAENNHGARVLVVCAEVSLISYSGPTDGCVDSVLGLALFGDGAGAVILGAGPVSGSERPL
FETVCAAQTTVPMTEAAITTQFAPGGMEYRIGKQVPGIVEQTIRQCLLDVTGPLGIDVVT
WNDLFWAVHCGGRAILDSVEAALGLGSQKLAASRHVLREYGNMSSAAVVFVLEEVHRRLT
SKNADGETAEWGVMVAFGPGVTVEIMVLRATTNLEEK

Transcript Sequence

Transcript ID

Zm00001d016014_T001

Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:139697094:139700302:1 gene:Zm00001d016014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type III polyketide synthase B

Sequence

AGCTCAAGGCTCACCAGGAAAGCCATGGGAAGCGCTCCCGTGAACGTCTGCGTGTCTCGA
CGCGGGCAGCAAGCGGAAGGGCCTGCCGCAGTGCTGGCCATTGGCACGGCCAATCCGCCG
CACTGCGTGCATCAGGACGAGTTCCCAGACTACTACTTCCGCATGTCCAGGAGCGAGCAT
CTCACCGACCTCAAGGTCAAGCTCAAGAGAATATGTGAGAAATCAGGAATAGAGAAACGC
TTCTTCCACATCAACGAGGAAATACTGGCCGCCCATCCGGACTTCAACGACCGAGAGAAG
CCGTCGCTCCAAGCCCGAATCGAGATGACGGTAACGGAAGTCCCCAAGCTCGCCGCGCGC
GCCGCCGCCAAGGCCATCGCGGAGTGGGGCCGCCCAGCCACGGACATCACGCACGTCGTG
TTCAGCACATACTCCGGCGCGAGGTCCCCGAGCGCGGACCTCCGCCTGGCGTCGCTTCTG
GGCCTGCGGCCCTCCGTGTGCCGTACCACGCTGAGCCTCCACGGCTGCTCGGGGGGCGTC
CGGGCGCTCCACCTGGCCAAAGACATCGCCGAGAACAACCACGGCGCGCGGGTCCTCGTG
GTCTGCGCCGAGGTTTCCCTCATCTCCTACAGCGGCCCCACGGACGGCTGCGTGGACTCT
GTCCTCGGCCTGGCACTGTTCGGCGACGGCGCCGGCGCCGTCATCCTGGGCGCCGGCCCC
GTCTCCGGCTCGGAGCGGCCGCTGTTCGAGACCGTGTGCGCCGCGCAGACGACCGTGCCG
ATGACCGAGGCCGCGATCACCACGCAGTTCGCGCCAGGCGGCATGGAGTACCGCATCGGC
AAGCAGGTTCCGGGGATCGTGGAGCAGACTATCAGGCAGTGCCTGCTCGACGTCACTGGG
CCGCTCGGCATCGACGTGGTGACATGGAACGACCTCTTCTGGGCGGTGCACTGTGGAGGC
CGCGCCATCTTGGACAGCGTTGAGGCAGCTCTCGGACTGGGATCTCAGAAGCTAGCAGCC
AGTCGCCATGTGCTGAGAGAGTACGGCAATATGAGTTCCGCAGCCGTCGTCTTTGTGCTC
GAGGAGGTTCACCGCCGACTGACGTCCAAGAACGCTGACGGGGAGACTGCCGAGTGGGGG
GTCATGGTAGCGTTCGGACCGGGGGTCACAGTTGAGATAATGGTCCTGCGTGCCACGACA
AACCTCGAGGAGAAGTAG