Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d016001_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:138744255:138746798:-1 gene:Zm00001d016001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	ATGGTGCGCTTCCTCCGGCGCGGACACAGCCTTCACAAGACCGGATCGCACAACAGCAAC CAGCAGCAGCAGCTGCTGCGAGAGCGCTACCTCGACAGGAGCGGCAGCGACACGGGCGAG ATGTATAGCAATGGCGCCGGCGGCACCCCGCCCCTTGCCAACAGCCAGGCGGCAGCGGCC GGGGCGGCGCGGTTGCGCCAGGGCCGCGACGGGCCGCTCTCAGAGCTGGACGTGATGAAG GAGAAGTTCGCCAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTGCCG TCCGCGCTCGCGCTGTCCAACGCCGTCACCAACCTCGCGGCGTCCGTCTTTGGCGAGCAC CGCAAGCTGGAGCCCATGGCGCCCGACACCAAGGAGCGCTGGAAGAGGGAGGTGGGATGG CTGCTCTCCGTCACCGACCACATCGTCGAGTTCGTGCCCACGCGCCACACCTCGGAGAAC GGAATCACGATGGAGATCATGTCCACGGCGCAGCGGCGCGACCTCGCCATGAACATCCCC GCGCTGCGGAAGCTCGACGCCATGCTCCTCGGCTACATGGACAACTTCGCGGACCAGACC GAGTTCTGGTACGAGAAGGGCGGGGACAACAAGCGCGACGACGACAAGTGGTGGATGCCG ACGGTGAAGGTGCCGTCGGAGGGGCTGTCGGACGTGACCCGCAAGTGGCTGCAGTACCAG AAGGAGTGCGTGAACCAGGTGCTCAAGGCGGCCATGGCCATCAACGCCCAGGTGCTTGTG GAGATGGAGATCCCGGAGGTGTACATTGAGTCGCTGCCAAAGAAAGGGAAGACGAGCCTA GGCGACGCCATCTACCGTAGCATCACCGAGGACACGTTCGACCCGGTGGAGTTCTTGGCC GGGATGGACCTTTCGACGGAGCACAAGGTGCTGGACCTCAAGAACCGCATCGAGGCCTCC ACCGTGATCTGGAAGCGCAAGATGCAGACCAACAAGGACTCCAAGTCCTCGTGGAGCTCC ATCGTCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCACCTC CTCAAGCTCCAGTTCCCGGGGACGCCGCAGTCGCAGCTCGACATCTCCAAGATCCAGTAC AACAGGGACGTCGGGTACGCCCTCCTGGAGAGCTACTCGCGCGTGCTGGAGAGCCTGGCG TACAGCGTCATGTCCCGCATCGAGGACGTGCTGAGCGCGGACGCGGCGGCACAGAACCTG ACGGCGACCGAGGCGGCGCGGCGGGTGCTGGAGTCGGCGGACCTGCTCGCGCCGCGGAAG CTGGACGCCAAGGAGGAGCTGGAGAAGCTGAACGAGGCCCCGGCGTCGATGACGCTCTTC GACTTCATGGGCTGGCACTTCGACCAGGACGAGCTGATGAAGCGCAGGGAGGACGGCACG CTGGACGCCGACGGCGAGGCCATGCTCCTCAAGAAGGCGCCCAGCGTGGCGCCCAAGAAG TTCTCCTACGTCGACAGCCTCTCCTCCGGCGGCATGAGGAGCCCCTCTGCGCGCCACTGA

Peptide Sequence

PEP ID	Zm00001d016001_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:138744255:138746798:-1 gene:Zm00001d016001 transcript:Zm00001d016001_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	MVRFLRRGHSLHKTGSHNSNQQQQLLRERYLDRSGSDTGEMYSNGAGGTPPLANSQAAAA GAARLRQGRDGPLSELDVMKEKFAKLLLGEDMSGTGKGVPSALALSNAVTNLAASVFGEH RKLEPMAPDTKERWKREVGWLLSVTDHIVEFVPTRHTSENGITMEIMSTAQRRDLAMNIP ALRKLDAMLLGYMDNFADQTEFWYEKGGDNKRDDDKWWMPTVKVPSEGLSDVTRKWLQYQ KECVNQVLKAAMAINAQVLVEMEIPEVYIESLPKKGKTSLGDAIYRSITEDTFDPVEFLA GMDLSTEHKVLDLKNRIEASTVIWKRKMQTNKDSKSSWSSIVSFEKREQFEERAETILHL LKLQFPGTPQSQLDISKIQYNRDVGYALLESYSRVLESLAYSVMSRIEDVLSADAAAQNL TATEAARRVLESADLLAPRKLDAKEELEKLNEAPASMTLFDFMGWHFDQDELMKRREDGT LDADGEAMLLKKAPSVAPKKFSYVDSLSSGGMRSPSARH

Transcript Sequence

Transcript ID	Zm00001d016001_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:138744255:138746798:-1 gene:Zm00001d016001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	GCGACATGCTCTCTCCATCCCGTCCCGCCCACCGCTGCTCCCTTGCCTGAGCTGCCGCCC GCCGCCGTCGCCGTGGGACCGATCGGTAGTAATCGGTCCAGAGCGCGGTGCAGCGAGCGG GAGCGAGGGAGGCGTCGTCGGCCGTCCTTCGTGCCCCGCGTTCGTTCTTGGAATTGGTCC GCGCGCGTCCTCATCAGCTGCGGGAGTCAGGGTGGCGCCTCGTGAGGCGGCGCGGCGGTG CAAGACCGCCGAGTGCCGCGCGCCCAGGCCTTGCGCGCCAAGCTCGAGGCGGCGGGCTGG GTGATGGTGCGCTTCCTCCGGCGCGGACACAGCCTTCACAAGACCGGATCGCACAACAGC AACCAGCAGCAGCAGCTGCTGCGAGAGCGCTACCTCGACAGGAGCGGCAGCGACACGGGC GAGATGTATAGCAATGGCGCCGGCGGCACCCCGCCCCTTGCCAACAGCCAGGCGGCAGCG GCCGGGGCGGCGCGGTTGCGCCAGGGCCGCGACGGGCCGCTCTCAGAGCTGGACGTGATG AAGGAGAAGTTCGCCAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTG CCGTCCGCGCTCGCGCTGTCCAACGCCGTCACCAACCTCGCGGCGTCCGTCTTTGGCGAG CACCGCAAGCTGGAGCCCATGGCGCCCGACACCAAGGAGCGCTGGAAGAGGGAGGTGGGA TGGCTGCTCTCCGTCACCGACCACATCGTCGAGTTCGTGCCCACGCGCCACACCTCGGAG AACGGAATCACGATGGAGATCATGTCCACGGCGCAGCGGCGCGACCTCGCCATGAACATC CCCGCGCTGCGGAAGCTCGACGCCATGCTCCTCGGCTACATGGACAACTTCGCGGACCAG ACCGAGTTCTGGTACGAGAAGGGCGGGGACAACAAGCGCGACGACGACAAGTGGTGGATG CCGACGGTGAAGGTGCCGTCGGAGGGGCTGTCGGACGTGACCCGCAAGTGGCTGCAGTAC CAGAAGGAGTGCGTGAACCAGGTGCTCAAGGCGGCCATGGCCATCAACGCCCAGGTGCTT GTGGAGATGGAGATCCCGGAGGTGTACATTGAGTCGCTGCCAAAGAAAGGGAAGACGAGC CTAGGCGACGCCATCTACCGTAGCATCACCGAGGACACGTTCGACCCGGTGGAGTTCTTG GCCGGGATGGACCTTTCGACGGAGCACAAGGTGCTGGACCTCAAGAACCGCATCGAGGCC TCCACCGTGATCTGGAAGCGCAAGATGCAGACCAACAAGGACTCCAAGTCCTCGTGGAGC TCCATCGTCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCAC CTCCTCAAGCTCCAGTTCCCGGGGACGCCGCAGTCGCAGCTCGACATCTCCAAGATCCAG TACAACAGGGACGTCGGGTACGCCCTCCTGGAGAGCTACTCGCGCGTGCTGGAGAGCCTG GCGTACAGCGTCATGTCCCGCATCGAGGACGTGCTGAGCGCGGACGCGGCGGCACAGAAC CTGACGGCGACCGAGGCGGCGCGGCGGGTGCTGGAGTCGGCGGACCTGCTCGCGCCGCGG AAGCTGGACGCCAAGGAGGAGCTGGAGAAGCTGAACGAGGCCCCGGCGTCGATGACGCTC TTCGACTTCATGGGCTGGCACTTCGACCAGGACGAGCTGATGAAGCGCAGGGAGGACGGC ACGCTGGACGCCGACGGCGAGGCCATGCTCCTCAAGAAGGCGCCCAGCGTGGCGCCCAAG AAGTTCTCCTACGTCGACAGCCTCTCCTCCGGCGGCATGAGGAGCCCCTCTGCGCGCCAC TGATAATAATATATGATCGTCGTCGCGCCACTGAACTAACAGCAGCTCAGTCATCGTCTA CGATCCAACAGCACCATGGATCGTCGATCGTCCACTCACGAGAAGGAGAGACGTCAATGG GAGAGGAGACGACGGCTCCTCCCATCCGATCCGACCCAATCGATCCTTGCTTACGTCGTG TACATAGCTGAGGCGCATGAAGCACGTGCGCACCCATTA