Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015990_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:137506224:137522034:1 gene:Zm00001d015990 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPP-transcription factor 9 description:Protein tesmin/TSO1-like CXC 5
Sequence	ATGGAGCAGGGGAGGAATCAACAGCACCCGCAGCAGTTGTCGAGTCCGCCTGTTTTGGCC GCCGCGAGCGAGATAAAGGCCCCTGCGGTGCCTTCGCAACAGCCCAAGCCGGCGGCCCCC GTGATGTCGGTGCCTAGACAGTGGCCGATAGCTTTCAACCCCCTGAAGTCCTCCACTGAA GAAAAAAGTGTTACTCCAAAGAAAAAGAAGCATTGTAATTGTAGAAACTCAAAATGTTTG AAGATGTACTGTGAATGCTTTCAAGAACTTCAATACTGTGATGGCTGCAACTGTTCAAAT TGTGGAAACATTGTTGGGAATGAGAATGCCAGAAACGAAGCAATTGAGGCAATTCGTCAG CGTAATCCGTCTGCTTTTCAGCCTAAAATTGGAAATGACTCAAATACACTCAACGTTCGA AAGGATAATTCTGGAGCAGTCCCTCTCGTAGCAAAGCACCATAAAGGTTGTCATTGCAAG AAGTCAGGATGCCTAAAGAAGTACTGTGAATGCTACCAAGCAAATGTTTTTTGCTCCAAA AATTGTAGATGCATGCACTGTAAGAACTCTGAAGGAAATAAAGATACAGAAACTTCAATT CAAAGGGACCATGCATCTGACAGAAATCATATTGAACAAGCAGCTAATATAGCATTCAAT GGTAGTGTTGGATCATCAGGATATATTTGTTCCCTTAGTAGAAAAAGATCTCATGAAGAC ACCCAATGTGTTAGGATAAACTCTGAAGGAAGCATGCCAGAGACACAATATCAACAGGGT AACCATGCAGATGTTTCAATGCTTCCACCCTGTTCCACAGGATTTGATGGGCACAATGCT GCCAATACTAAACCGTATAACCCAAACTACAGGTCTCCACTGGCAAACACCATCCACCTC AGTGAGGTCAATGATCTAGTCAAGCAGTTGGTGATGGTTTGCAGAATGGCTGCAGCGACA ATAGCTGATGATGAAACAGATTTGATTGCTGAAGAGAAGGGATCCCAGTCAAATAATGGG TTAAGCAATGGTAACTGCAAACAGCAGGACTTCAAAGAAGCCTCCTCCATGGTCATCCTT AGCGAAGGATGTAGTGACCAACCCAACATCGATGAAACGGGCTCCCATCGGTCTAAAACA TTGGATTTTTCTAGGCCTGCATCTCCAACAACACAAGCACTAATGTGTGATGAACAGGAT GCCACATTTGGAAATGAGCCTGCATCTCCAACAACACAAGCACTGATGTGTGAAGAACAG AATACCACATTTGGAAATGATTATAGAAGTTCATTTCCTTTGGTTTCGTGTGATCAAGAT ATTTCTGAGATAAATGCTGCACAAGAAAACCTAGTATTGACTGGGTTGCGAGAGTATCTC CGGGTGATTATCACACGTGGAAAAATAAATGAACACAAATCCTCATTAGAGGCAGCAATG GAATTGGATGCCCAACAGCATCATGGAGCACCACCTGCCCTTTCTGCAACAGAAGATGAA GAAAAATCTCCTCCTTCAAGCACTATTGAAACCCCAAGAACTAATCAACAGCCTACACCA AATGGTGGATCGAAAGATAGTATTGGAAGCTAA

Peptide Sequence

PEP ID	Zm00001d015990_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:137506224:137522034:1 gene:Zm00001d015990 transcript:Zm00001d015990_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPP-transcription factor 9 description:Protein tesmin/TSO1-like CXC 5
Sequence	MEQGRNQQHPQQLSSPPVLAAASEIKAPAVPSQQPKPAAPVMSVPRQWPIAFNPLKSSTE EKSVTPKKKKHCNCRNSKCLKMYCECFQELQYCDGCNCSNCGNIVGNENARNEAIEAIRQ RNPSAFQPKIGNDSNTLNVRKDNSGAVPLVAKHHKGCHCKKSGCLKKYCECYQANVFCSK NCRCMHCKNSEGNKDTETSIQRDHASDRNHIEQAANIAFNGSVGSSGYICSLSRKRSHED TQCVRINSEGSMPETQYQQGNHADVSMLPPCSTGFDGHNAANTKPYNPNYRSPLANTIHL SEVNDLVKQLVMVCRMAAATIADDETDLIAEEKGSQSNNGLSNGNCKQQDFKEASSMVIL SEGCSDQPNIDETGSHRSKTLDFSRPASPTTQALMCDEQDATFGNEPASPTTQALMCEEQ NTTFGNDYRSSFPLVSCDQDISEINAAQENLVLTGLREYLRVIITRGKINEHKSSLEAAM ELDAQQHHGAPPALSATEDEEKSPPSSTIETPRTNQQPTPNGGSKDSIGS

Transcript Sequence

Transcript ID	Zm00001d015990_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:137506224:137522034:1 gene:Zm00001d015990 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPP-transcription factor 9 description:Protein tesmin/TSO1-like CXC 5
Sequence	AGAATGAAACCAGTATAAATGCTTAAATATTTCAGATTCAAAAAAACTGCGAAGGGCGAC CAAACCTCCATTGTCCCATCCTCAGCGTCTTCTCCCCGAGCCCAGCACCACCCTCCTCGA TCCCAAAGACCAGAAAGATTTTGCCTTTCCTCTTATCTTCTCCTCAAATTCAATTCCTCG TAATCTCCCTTATTGGCATCGATTCCTTCGATCTTCTCCGCTACCCCCTCCCGTTTCCCG CTGCTTATTGAGTTTTGGACTCTGCATGAGTCTATCAACTCGCCCTTGTTAAAGGATTCA TTGTCCAATTGCGGTAGCTCGCGCGGCAAGATTCGGTTTTTGAGTCGGTGCGCGACGGTA GTGGTCCAGATTGCTGAGCCCGGCTCGACGTTCTGGCCTGAGACCTAATTCGGTGGCATT GTGGTGTGGTGATGGAGCAGGGGAGGAATCAACAGCACCCGCAGCAGTTGTCGAGTCCGC CTGTTTTGGCCGCCGCGAGCGAGATAAAGGCCCCTGCGGTGCCTTCGCAACAGCCCAAGC CGGCGGCCCCCGTGATGTCGGTGCCTAGACAGTGGCCGATAGCTTTCAACCCCCTGAAGT CCTCCACTGAAGAAAAAAGTGTTACTCCAAAGAAAAAGAAGCATTGTAATTGTAGAAACT CAAAATGTTTGAAGATGTACTGTGAATGCTTTCAAGAACTTCAATACTGTGATGGCTGCA ACTGTTCAAATTGTGGAAACATTGTTGGGAATGAGAATGCCAGAAACGAAGCAATTGAGG CAATTCGTCAGCGTAATCCGTCTGCTTTTCAGCCTAAAATTGGAAATGACTCAAATACAC TCAACGTTCGAAAGGATAATTCTGGAGCAGTCCCTCTCGTAGCAAAGCACCATAAAGGTT GTCATTGCAAGAAGTCAGGATGCCTAAAGAAGTACTGTGAATGCTACCAAGCAAATGTTT TTTGCTCCAAAAATTGTAGATGCATGCACTGTAAGAACTCTGAAGGAAATAAAGATACAG AAACTTCAATTCAAAGGGACCATGCATCTGACAGAAATCATATTGAACAAGCAGCTAATA TAGCATTCAATGGTAGTGTTGGATCATCAGGATATATTTGTTCCCTTAGTAGAAAAAGAT CTCATGAAGACACCCAATGTGTTAGGATAAACTCTGAAGGAAGCATGCCAGAGACACAAT ATCAACAGGGTAACCATGCAGATGTTTCAATGCTTCCACCCTGTTCCACAGGATTTGATG GGCACAATGCTGCCAATACTAAACCGTATAACCCAAACTACAGGTCTCCACTGGCAAACA CCATCCACCTCAGTGAGGTCAATGATCTAGTCAAGCAGTTGGTGATGGTTTGCAGAATGG CTGCAGCGACAATAGCTGATGATGAAACAGATTTGATTGCTGAAGAGAAGGGATCCCAGT CAAATAATGGGTTAAGCAATGGTAACTGCAAACAGCAGGACTTCAAAGAAGCCTCCTCCA TGGTCATCCTTAGCGAAGGATGTAGTGACCAACCCAACATCGATGAAACGGGCTCCCATC GGTCTAAAACATTGGATTTTTCTAGGCCTGCATCTCCAACAACACAAGCACTAATGTGTG ATGAACAGGATGCCACATTTGGAAATGAGCCTGCATCTCCAACAACACAAGCACTGATGT GTGAAGAACAGAATACCACATTTGGAAATGATTATAGAAGTTCATTTCCTTTGGTTTCGT GTGATCAAGATATTTCTGAGATAAATGCTGCACAAGAAAACCTAGTATTGACTGGGTTGC GAGAGTATCTCCGGGTGATTATCACACGTGGAAAAATAAATGAACACAAATCCTCATTAG AGGCAGCAATGGAATTGGATGCCCAACAGCATCATGGAGCACCACCTGCCCTTTCTGCAA CAGAAGATGAAGAAAAATCTCCTCCTTCAAGCACTATTGAAACCCCAAGAACTAATCAAC AGCCTACACCAAATGGTGGATCGAAAGATAGTATTGGAAGCTAAATAAAACTCGGTACAG AATTCAGCCTCTTCATTTCAAGACGCCTGCACTGCAAATGATTTCGGTACATAGATCGGC ATTGGGCGAGATAGATACTATAGTTTTTGTTGCCATTTCTGGCAACAGGCCTTGTAGGAA ATGAACTACCATTCATGCATTAGACGTTTAGTAGCAGGAAACAAAAGTTGCCTGCTACAT CGTGTTGTAATTTAATAAATGATAATTTTCATTGTTCGATGCTCGAGTTGACTAACTGGT TTTGTTTAAAG