Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015984_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:136647323:136655750:1 gene:Zm00001d015984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence	ATGGATAGGGGAGTCGTCCACAAATCATCGGCGGCTCTAGTGCGCGAGATGGGGGAGGCA GGCCATAGCCATGGATGGTGGAGCATGAATAATTTGCTGAGGCCCCCCTTTGAGCAGCAG CACCACGCTTCTCTTTTCATGCCGTCCACAACCACCAGCAGCAGCACCGCCGCCGCCGCG CCCTCTTCTTCTTCGTCGTCGTCGCCGCCTCTCCAATCCTTCTCCTCTCTGCTGCTCTCG AACCACTACCCGCTGCCTACCACCACCAGCACGTCGCCGTGGCAGCACGACACCAGCATC ACAAGTAGCCATGGCCAGCCGGATTCTTGGAGCCAGCTCATACACAAGGAAAGCCAGCAG ATGGCGTTTCCAACTACGATTTGTTCGGAATCCGGAGGCGGCGGCAGCAGCTACGTCGTC TACGGTGCCGCAGCGGCTAGCCATGGGAGCAGCACAAGTGATGTCGAGATCCAGTTGCCA TGGGGAAGCAGCAGCGTACTCCAGCAGCAGCAGAAAGCGTCCTCTCCTAGGTCTTCTTCC AGAACCACAGCGACGACGACCTCTCCCGGAAGCAACATGCTGGAGTTCTCCAACAACAGT AGCAGTTCACCACGTGAGTGCATCAGTACAGTATCTGGATCAGCTTTCAAGAAGGCTAGG ACCCAAGAACCCTCCCCGGCTCAATCTACTGTGAAGGTGAGGAAGGAGAAGCTAGGGGAT CGAATAACTGCTCTCCACCAGCTTGTCTCCCCGTTTGGAAAGACTGACACAGCGTCTGTA CTCCTTGAAGCCATTGGGTACATCAGATTCCTCCATAGTCAAATTGAGGCTCTGAGCTCC CCGTACGTGGGCGGCAGCAATGGAGGTGGGGGCGGCTCCAAGCAGAATCAGCAGCTCCAC GAGGCTAGTCTCCTGCATGACAGCAGCGCAATAAAGAAACGGGCCGGACTGCAGCCTGCT GATGGTGAGCAGGATGAAGAAAGCTGTGATGAAGAGAAGAAGAAGGATCTGAGAAGCAGG GGCCTGTGCCTCGTCCCGGTGAGCTGCACGCTGGACGTGGGTGTGGACGTGGTCGCTGGC CCCGCAGACTACTGGGCGGCAGCTGCGCCGGCTTTCGGCATGGGGTTCGGTGCGTAG

Peptide Sequence

PEP ID	Zm00001d015984_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:136647323:136655750:1 gene:Zm00001d015984 transcript:Zm00001d015984_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence	MDRGVVHKSSAALVREMGEAGHSHGWWSMNNLLRPPFEQQHHASLFMPSTTTSSSTAAAA PSSSSSSSPPLQSFSSLLLSNHYPLPTTTSTSPWQHDTSITSSHGQPDSWSQLIHKESQQ MAFPTTICSESGGGGSSYVVYGAAAASHGSSTSDVEIQLPWGSSSVLQQQQKASSPRSSS RTTATTTSPGSNMLEFSNNSSSSPRECISTVSGSAFKKARTQEPSPAQSTVKVRKEKLGD RITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSSPYVGGSNGGGGGSKQNQQLH EASLLHDSSAIKKRAGLQPADGEQDEESCDEEKKKDLRSRGLCLVPVSCTLDVGVDVVAG PADYWAAAAPAFGMGFGA

Transcript Sequence

Transcript ID	Zm00001d015984_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:136647323:136655750:1 gene:Zm00001d015984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence	GTGAGACAGTGAGAGAGAGAGAGGGAGGGAGGGAGGGATCAGAGGGAGGAGAATATGGAT AGGGGAGTCGTCCACAAATCATCGGCGGCTCTAGTGCGCGAGATGGGGGAGGCAGGCCAT AGCCATGGATGGTGGAGCATGAATAATTTGCTGAGGCCCCCCTTTGAGCAGCAGCACCAC GCTTCTCTTTTCATGCCGTCCACAACCACCAGCAGCAGCACCGCCGCCGCCGCGCCCTCT TCTTCTTCGTCGTCGTCGCCGCCTCTCCAATCCTTCTCCTCTCTGCTGCTCTCGAACCAC TACCCGCTGCCTACCACCACCAGCACGTCGCCGTGGCAGCACGACACCAGCATCACAAGT AGCCATGGCCAGCCGGATTCTTGGAGCCAGCTCATACACAAGGAAAGCCAGCAGATGGCG TTTCCAACTACGATTTGTTCGGAATCCGGAGGCGGCGGCAGCAGCTACGTCGTCTACGGT GCCGCAGCGGCTAGCCATGGGAGCAGCACAAGTGATGTCGAGATCCAGTTGCCATGGGGA AGCAGCAGCGTACTCCAGCAGCAGCAGAAAGCGTCCTCTCCTAGGTCTTCTTCCAGAACC ACAGCGACGACGACCTCTCCCGGAAGCAACATGCTGGAGTTCTCCAACAACAGTAGCAGT TCACCACGTGAGTGCATCAGTACAGTATCTGGATCAGCTTTCAAGAAGGCTAGGACCCAA GAACCCTCCCCGGCTCAATCTACTGTGAAGGTGAGGAAGGAGAAGCTAGGGGATCGAATA ACTGCTCTCCACCAGCTTGTCTCCCCGTTTGGAAAGACTGACACAGCGTCTGTACTCCTT GAAGCCATTGGGTACATCAGATTCCTCCATAGTCAAATTGAGGCTCTGAGCTCCCCGTAC GTGGGCGGCAGCAATGGAGGTGGGGGCGGCTCCAAGCAGAATCAGCAGCTCCACGAGGCT AGTCTCCTGCATGACAGCAGCGCAATAAAGAAACGGGCCGGACTGCAGCCTGCTGATGGT GAGCAGGATGAAGAAAGCTGTGATGAAGAGAAGAAGAAGGATCTGAGAAGCAGGGGCCTG TGCCTCGTCCCGGTGAGCTGCACGCTGGACGTGGGTGTGGACGTGGTCGCTGGCCCCGCA GACTACTGGGCGGCAGCTGCGCCGGCTTTCGGCATGGGGTTCGGTGCGTAGATGATGCTG GCCAGGACGTACGATCGATGCTGTGAGGAACACTTGTGTGTGTCTGTGTGCGCCATATGC ATGTATGGGCTGCACCTGCATGCATAGCATCAGGAGCAGCCATCCTGGTGGAAGCTGGAG AATGCTCAAGAAGGCTGGCTCCTCTTGATGCTATATATGCGTATGGTATATGGTGCACAC ACCGACAATGCATGCATGGGCATATATTATATAGCTACAGAGACGCTGAGAGTATATGAC TTGCGTTTCTGTGTTTGTGTGTACGTGATGAGATCTTGTCTAGCTAGCTAGAGCGAGATC AAACAATTTGGGTGCCATGGAGAGGGGCGCTATAGCTGCAGATATTTAATTGTTAAGGCT AGGAGTACTGCGCGCGGATCTGTAAGCAATGCAACTCTTTTAAGTCTTCGTCATTGAGGC GTCACTGTGTGCTATATATATATGCATGGCCGAAATGTGTAATAA