Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015952_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:133821714:133825615:1 gene:Zm00001d015952 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	ATGGAGCTGGACAGCATCGAGTGCATGTCCTACTCCGACAGCATGGGGGACGACGACACC GACGCCGTCACCTCGTCCCAGCTCCCTCGCCCCTTCCTCAAATCCTCCTCCACCGCCGGT ACTGCCGCCGTCAACGTGGTCGTCGTCTCCGACCGCGTCGGTGCCGCCGGGCCGGTAGCG GGAGCGGGTTCGCTGGTGATTTCGCCAGCCACGGGCGTGCACGAGCTGCTCGAGTGCCCC GTCTGCACCAATTCCATGTACCCGCCTATCCACCAGTGCCAAAATGGTCATACTCTATGT TCCACCTGCAAAACTCGGGTGCACAACCGCTGCCCAACTTGTCGACAAGAGCTAGGTGAC ATCAGGTGTCTGGCATTAGAGAAGGTGGCTGAATCACTTGAGCTCCCCTGCAAATACTAC TCTCTTGGATGTTCAGAAGTCTTCCCATACTACAGCAAACTCAAGCATGAATCACAGTGT AATTTTAGGCCATACAACTGCCCTTATGCTGGTTCTGAATGCTCAGTTGTTGGGGATATT TCTTTTCTTGTGGCACATCTGCGAGATGATCATAAAGTGGACATGCACTCTGGATGTACA TTTAATCACCGCTATGTCAAGTCCAATCCAAGAGAGGTTGAAAATGCAACTTGGATGCTA ACTGTTTTTCATTGTTTTGGGCAGTACTTTTGCTTGCACTTTGAGGCATTTCAGCTTGGA ATGGCACCAGTATACATGGCTTTCCTCCGGTTTATGGGCGATGAAAATGATGCTAGGAAC TACAGCTATAGCCTTGAGGTTGGTGCAAATGGCAGGAAGATGATATGGGAGGGAACTCCC CGCAGCATCCGGGACAGCCACCGGAAGGTTAGGGACAGCCATGATGGTCTAATAATTCAG CGCAACATGGCTCTCTTCTTCTCAGGTGGAGAAAGGAAAGAGCTGAAACTGCGAGTCACA GGCCGTATCTGGAAGGAGCAGCAGAATCCTGACTCAGGAGCCTGCATTCCCAATTTGTTC AGCTGA

Peptide Sequence

PEP ID	Zm00001d015952_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:133821714:133825615:1 gene:Zm00001d015952 transcript:Zm00001d015952_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	MELDSIECMSYSDSMGDDDTDAVTSSQLPRPFLKSSSTAGTAAVNVVVVSDRVGAAGPVA GAGSLVISPATGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCPTCRQELGD IRCLALEKVAESLELPCKYYSLGCSEVFPYYSKLKHESQCNFRPYNCPYAGSECSVVGDI SFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG MAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQ RNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS

Transcript Sequence

Transcript ID	Zm00001d015952_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:133821714:133825615:1 gene:Zm00001d015952 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	GACCCCACACACATTCCTCCCTCAGTCCCTCTTCCCCCCGTTTCATCCCTTCACACCCAC AGCCCACCTGGTCTGTCATCCCCTTTGCTACGCTCCCCTTGCCCTGTCCCCTCGCCGCCC GCGCCCGTGGAGTTCTTCGATCGAGTCCTCGGAGCCCGGAGCACCTGGTGCAACAATCCG GACCCGCGCGAGGAAGGGCGGAGAGAGAGCCGAATCTGAGCCTCGGCACAAGTTGGGCAC CCGTCAAGATTCTCGGCCCGATCTGCTGCGGAACATGGAGCTGGACAGCATCGAGTGCAT GTCCTACTCCGACAGCATGGGGGACGACGACACCGACGCCGTCACCTCGTCCCAGCTCCC TCGCCCCTTCCTCAAATCCTCCTCCACCGCCGGTACTGCCGCCGTCAACGTGGTCGTCGT CTCCGACCGCGTCGGTGCCGCCGGGCCGGTAGCGGGAGCGGGTTCGCTGGTGATTTCGCC AGCCACGGGCGTGCACGAGCTGCTCGAGTGCCCCGTCTGCACCAATTCCATGTACCCGCC TATCCACCAGTGCCAAAATGGTCATACTCTATGTTCCACCTGCAAAACTCGGGTGCACAA CCGCTGCCCAACTTGTCGACAAGAGCTAGGTGACATCAGGTGTCTGGCATTAGAGAAGGT GGCTGAATCACTTGAGCTCCCCTGCAAATACTACTCTCTTGGATGTTCAGAAGTCTTCCC ATACTACAGCAAACTCAAGCATGAATCACAGTGTAATTTTAGGCCATACAACTGCCCTTA TGCTGGTTCTGAATGCTCAGTTGTTGGGGATATTTCTTTTCTTGTGGCACATCTGCGAGA TGATCATAAAGTGGACATGCACTCTGGATGTACATTTAATCACCGCTATGTCAAGTCCAA TCCAAGAGAGGTTGAAAATGCAACTTGGATGCTAACTGTTTTTCATTGTTTTGGGCAGTA CTTTTGCTTGCACTTTGAGGCATTTCAGCTTGGAATGGCACCAGTATACATGGCTTTCCT CCGGTTTATGGGCGATGAAAATGATGCTAGGAACTACAGCTATAGCCTTGAGGTTGGTGC AAATGGCAGGAAGATGATATGGGAGGGAACTCCCCGCAGCATCCGGGACAGCCACCGGAA GGTTAGGGACAGCCATGATGGTCTAATAATTCAGCGCAACATGGCTCTCTTCTTCTCAGG TGGAGAAAGGAAAGAGCTGAAACTGCGAGTCACAGGCCGTATCTGGAAGGAGCAGCAGAA TCCTGACTCAGGAGCCTGCATTCCCAATTTGTTCAGCTGAGCTCAGTAACAAGAGGATGG ATCCAGGTGTATATTGATACGGCCGATGTGTTTGTGTGAGCGTGTGCCTGTGCTTTGCGT TTTGTCCTGCCAAGCTGCCATTGCAGCCCGCCCTAAATTAGTCAGGGCGTATTTACTGTT GGCAGGATAATGAAAATACTGGCTTACTCCTTTTGTGGGCTGTGACTAAGCTCCCATGAA TCTCACGATAAGCATTTTTCTCGATCCAATGGTGTATACTGTATCGTTTTGGGCTGAAGG CTGCAGCTTTTTTGCTGTTATGTTTGTCTCGGTGTATTTGTGTGTCTGCAAATAAAGTAT TGAACAGTAACTGGGTACCTTGC