Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015948_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:5:133565014:133578280:-1 gene:Zm00001d015948 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease ATP-binding subunit clpX
Sequence	ATGTCAGCCGCCGTCCGCTCCCGCGCCGCAGCGGCCGCCCTCTCGGCCGCGCGCCGCATC CACGCTGGCCACGCCGCGGGGCAGAAGCAGCAGGGCAGCAACAGCACTGGCGCCTTTCGC CGACCTTGGACCCTCTTCAGGCGCCAGCAGCAGGAGGAGCGGAGCCACGTTCCCCGCGCC GCCGCTCCTGTCCTGGATGCTGTCGCCGATCACAGGGCCGGCGGTTCGGACGGTGCGGAG CCCCCAGAGATCTGGCGACAGCCCGGAGAAGCCCCTGTCGCTCCCGAGGGTGTGGGCGCC GTCGGGAGGATCGACGTGGTTAGGGTTGCAGCCCCCGGTGGGGAAGACTTTGATGGAAAG GACGGGGGCGGGGAAAGCGGGGGTTGGGGTGGCTCTAACCTGGGACGACGGTTTCCCACG CCCAAGGAGATTTGCCGTGGGCTGGACAAGTTTGTCATCGGCCAGCAGCGAGCCAAGAAG GTGTTGTCAGTAGCAGTTTATAATCACTATAAAAGGATCTATTGTGAATCACTCATCAAC AGGTCTGCTGCGGATTGCAGTCAGAGTGATTCTTGCACGAGTGACACCGACATGGTAGAG CTTGAGAAAAGCAATATTCTTGTCATGGGACCAACGGGCTCGGGGAAAACATTGCTGGCA AAAACACTGGCAAGATTTGTGAACGTGCCCTTCGTTATAGCTGATGCGACAAGCCTCACT CAGGCTGGATATGTTGGTGAGGATGTTGAATCTATTTTGTATAAGCTCCTAGCGGCTGCT GATTTCGACGTAGCTGCTGCCCAGCAGGGAATCGTCTATATTGATGAAGTTGATAAAATA ACAAAGAAGGCTGAAAGCATCAATCTTAGCAGAGATGTTTCAGGTGAAGGTGTGCAACAA GCATTGTTGAAAATGCTTGAAGGAACGGTTGTTAGTGTTCCTGAGAAAGGGGCCAGAAGG CACCCAAGGGGTGACAATATCCAGATTGATACCAAAAACATTCTCTTCATCTGCGGTGGT GCTTTTGTGGACTTGGAGAAAACTATTTCTGAAAGGAGACATGATTCTTCAATTGGTTTC CGAGCGCAGGTTCGTTCAAATATGCGATCTGGTGGTGTCATAAATGCTGAGATTACATCA TCGCTACTGAAATCAGTTGAAAGTGGCGATCTCATTGCGTATGGACTAATCCCAGAGTTT GTTGGTAGATTTCCAATTCTTGTTGGTCTATCCTCCCTCAGCGAAGATCAGCTTGTTGAG GTTCTCACAGAGCCAAAGAATGCCCTTGGCAGGCAGTATACCAAGTTGTTCGAAATGAAT GACGTCAAATTGCATTTTACGGAGGAGGCTTTACGGCTTATTGCCAAAAGAGCAATATCG AAGAATACTGGGGCTCGTGGTTTAAGGTCCATATTAGAAAGTATATTGACAGAAGCTATG TATGAGATTCCAGAGACACGAACTGGAAAAGATAAAATAGATGCTGTGGTTGTTGACGAG GAGTCTGTTGGATCTGTAAATCAGCATGGAATTGGAGCTAAGATTCTTTGCGGAGAAAAA GCTTTGGATGTCTATCTGGCCAATCACAACAATAAAGAATCAACGGGCCAACTCCAGGAG AGACCAAACGGGGAATCAGAGATCGATACGGAAGCCCCCTCTAGAGTGGCCAGCATGTAG

Peptide Sequence

PEP ID	Zm00001d015948_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:5:133565014:133578280:-1 gene:Zm00001d015948 transcript:Zm00001d015948_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease ATP-binding subunit clpX
Sequence	MSAAVRSRAAAAALSAARRIHAGHAAGQKQQGSNSTGAFRRPWTLFRRQQQEERSHVPRA AAPVLDAVADHRAGGSDGAEPPEIWRQPGEAPVAPEGVGAVGRIDVVRVAAPGGEDFDGK DGGGESGGWGGSNLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLIN RSAADCSQSDSCTSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLT QAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQ ALLKMLEGTVVSVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGF RAQVRSNMRSGGVINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVE VLTEPKNALGRQYTKLFEMNDVKLHFTEEALRLIAKRAISKNTGARGLRSILESILTEAM YEIPETRTGKDKIDAVVVDEESVGSVNQHGIGAKILCGEKALDVYLANHNNKESTGQLQE RPNGESEIDTEAPSRVASM

Transcript Sequence

Transcript ID	Zm00001d015948_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:133565014:133578280:-1 gene:Zm00001d015948 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent Clp protease ATP-binding subunit clpX
Sequence	GATTCATTCCAGTCCACCCTCCCTTCCCCGCACGAAACCCCCACCAGTATTCATCCATGT CAGCCGCCGTCCGCTCCCGCGCCGCAGCGGCCGCCCTCTCGGCCGCGCGCCGCATCCACG CTGGCCACGCCGCGGGGCAGAAGCAGCAGGGCAGCAACAGCACTGGCGCCTTTCGCCGAC CTTGGACCCTCTTCAGGCGCCAGCAGCAGGAGGAGCGGAGCCACGTTCCCCGCGCCGCCG CTCCTGTCCTGGATGCTGTCGCCGATCACAGGGCCGGCGGTTCGGACGGTGCGGAGCCCC CAGAGATCTGGCGACAGCCCGGAGAAGCCCCTGTCGCTCCCGAGGGTGTGGGCGCCGTCG GGAGGATCGACGTGGTTAGGGTTGCAGCCCCCGGTGGGGAAGACTTTGATGGAAAGGACG GGGGCGGGGAAAGCGGGGGTTGGGGTGGCTCTAACCTGGGACGACGGTTTCCCACGCCCA AGGAGATTTGCCGTGGGCTGGACAAGTTTGTCATCGGCCAGCAGCGAGCCAAGAAGGTGT TGTCAGTAGCAGTTTATAATCACTATAAAAGGATCTATTGTGAATCACTCATCAACAGGT CTGCTGCGGATTGCAGTCAGAGTGATTCTTGCACGAGTGACACCGACATGGTAGAGCTTG AGAAAAGCAATATTCTTGTCATGGGACCAACGGGCTCGGGGAAAACATTGCTGGCAAAAA CACTGGCAAGATTTGTGAACGTGCCCTTCGTTATAGCTGATGCGACAAGCCTCACTCAGG CTGGATATGTTGGTGAGGATGTTGAATCTATTTTGTATAAGCTCCTAGCGGCTGCTGATT TCGACGTAGCTGCTGCCCAGCAGGGAATCGTCTATATTGATGAAGTTGATAAAATAACAA AGAAGGCTGAAAGCATCAATCTTAGCAGAGATGTTTCAGGTGAAGGTGTGCAACAAGCAT TGTTGAAAATGCTTGAAGGAACGGTTGTTAGTGTTCCTGAGAAAGGGGCCAGAAGGCACC CAAGGGGTGACAATATCCAGATTGATACCAAAAACATTCTCTTCATCTGCGGTGGTGCTT TTGTGGACTTGGAGAAAACTATTTCTGAAAGGAGACATGATTCTTCAATTGGTTTCCGAG CGCAGGTTCGTTCAAATATGCGATCTGGTGGTGTCATAAATGCTGAGATTACATCATCGC TACTGAAATCAGTTGAAAGTGGCGATCTCATTGCGTATGGACTAATCCCAGAGTTTGTTG GTAGATTTCCAATTCTTGTTGGTCTATCCTCCCTCAGCGAAGATCAGCTTGTTGAGGTTC TCACAGAGCCAAAGAATGCCCTTGGCAGGCAGTATACCAAGTTGTTCGAAATGAATGACG TCAAATTGCATTTTACGGAGGAGGCTTTACGGCTTATTGCCAAAAGAGCAATATCGAAGA ATACTGGGGCTCGTGGTTTAAGGTCCATATTAGAAAGTATATTGACAGAAGCTATGTATG AGATTCCAGAGACACGAACTGGAAAAGATAAAATAGATGCTGTGGTTGTTGACGAGGAGT CTGTTGGATCTGTAAATCAGCATGGAATTGGAGCTAAGATTCTTTGCGGAGAAAAAGCTT TGGATGTCTATCTGGCCAATCACAACAATAAAGAATCAACGGGCCAACTCCAGGAGAGAC CAAACGGGGAATCAGAGATCGATACGGAAGCCCCCTCTAGAGTGGCCAGCATGTAGAGGT TCCTGGCAACAATAATTATGTATATAAATAACTTATTGTCTGCCTTGTAACTGTAACCAA TTCAAATGTAAAGTCGGGCCATATAAATTCATCATGTGACCGGCGCTGGGTTGTAATTTG TCATGTTGAATTTCGGGGGACTGAAGCTTGATCTTGCAGTATTTACATAAGGAAAGTAAA GAGGATCGCTTTGCGTCTTTGG