Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015932_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:132599003:132614556:1 gene:Zm00001d015932 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin modification-related protein EAF3

Sequence

ATGGGCAGCTCCTCGAATACCAACACGAGCGGCGGGGCCAGCGACAAGGAGGAGAAGAAG
AAGGAGGACAAGATCAAAGGCAAGGACTCGTCGGGGCCATCCTTCAAGGAGAACGAAAGG
GTCCTCGCCTACCACGGCCCCCTCCTCTACGAGGCCAAGTTTAATGATAACGGAACTTTA
TATATTCTGTCCCATTTCTCAAGGTTCAAAGGATCGAAAACCATGAAGATGAATGGCGCT
ACTTTGTCCATTATCTCGGTTGGAATAAGAACGGATGCAAAAGCTGATAAAGATGACACT
AAGAGTCTCATTTCAGTGAAGGGGAAGAAACGTAAAAGTCAGCTTGGGACTGAGATTCAG
GACAAGGAAAAAAGATCATCACATAGTCTACTAGTGTTGCAGTTTCCTTTGCCACTGAAG
AAGCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGCTTGTGAAGCTACCA
CGATCACCTACTGTTGATGATATTCTAAAGAAGTACTTGGAACACCGGGCAAAGAAGGAT
GGCAAGATAAATGACTCCTATGCTGAGATTCTGAAAGGATTACGCTGCTACTTTGATAAA
GCATTGCCTGCAATGCTTTTATATAAGAAAGAGCGAGATCAGTATGCTGAAGAAGTTAAA
GGTGATGTCTCACCATCAACTGTATATGGAGCTGAGCATCTATTGCGCCTTTTTGTAAAA
TTGCCAGAGCTACTTGCTTCTGTCAATATGGAGGAAGATGCGTTGAACAAGCTACAGCTG
AAACTGCTGGACGTTCTCAAGTTTCTTCAGAAGAATCAGATCACCTTCTTTACCTCTGCG
TACGATGGTTCTTGTAAAGGTGCAGATGAGGATAAAACCAAATGA

Peptide Sequence

PEP ID

Zm00001d015932_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:132599003:132614556:1 gene:Zm00001d015932 transcript:Zm00001d015932_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin modification-related protein EAF3

Sequence

MGSSSNTNTSGGASDKEEKKKEDKIKGKDSSGPSFKENERVLAYHGPLLYEAKFNDNGTL
YILSHFSRFKGSKTMKMNGATLSIISVGIRTDAKADKDDTKSLISVKGKKRKSQLGTEIQ
DKEKRSSHSLLVLQFPLPLKKQLVDDWEFVTQMGKLVKLPRSPTVDDILKKYLEHRAKKD
GKINDSYAEILKGLRCYFDKALPAMLLYKKERDQYAEEVKGDVSPSTVYGAEHLLRLFVK
LPELLASVNMEEDALNKLQLKLLDVLKFLQKNQITFFTSAYDGSCKGADEDKTK

Transcript Sequence

Transcript ID

Zm00001d015932_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:132599003:132614556:1 gene:Zm00001d015932 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chromatin modification-related protein EAF3

Sequence

AAACAAAACCTGAGTCTCTCCACCGTACACGAAAAAGACGGCCCGTTGGCCCGGAATTAT
TACCGTCTGTTTGTCCTCGTCTCCCTCCGCTGTCCGATTGTGCGCTGTCGCAGCCTCTGC
CCTCTCCCAGCCCGCTCCTCCATCTCCGGTGAGACGCGAATTGAATCGCATCGAATCCAT
GGGCAGCTCCTCGAATACCAACACGAGCGGCGGGGCCAGCGACAAGGAGGAGAAGAAGAA
GGAGGACAAGATCAAAGGCAAGGACTCGTCGGGGCCATCCTTCAAGGAGAACGAAAGGGT
CCTCGCCTACCACGGCCCCCTCCTCTACGAGGCCAAGTTTAATGATAACGGAACTTTATA
TATTCTGTCCCATTTCTCAAGGTTCAAAGGATCGAAAACCATGAAGATGAATGGCGCTAC
TTTGTCCATTATCTCGGTTGGAATAAGAACGGATGCAAAAGCTGATAAAGATGACACTAA
GAGTCTCATTTCAGTGAAGGGGAAGAAACGTAAAAGTCAGCTTGGGACTGAGATTCAGGA
CAAGGAAAAAAGATCATCACATAGTCTACTAGTGTTGCAGTTTCCTTTGCCACTGAAGAA
GCAACTTGTGGATGATTGGGAGTTTGTTACGCAGATGGGTAAGCTTGTGAAGCTACCACG
ATCACCTACTGTTGATGATATTCTAAAGAAGTACTTGGAACACCGGGCAAAGAAGGATGG
CAAGATAAATGACTCCTATGCTGAGATTCTGAAAGGATTACGCTGCTACTTTGATAAAGC
ATTGCCTGCAATGCTTTTATATAAGAAAGAGCGAGATCAGTATGCTGAAGAAGTTAAAGG
TGATGTCTCACCATCAACTGTATATGGAGCTGAGCATCTATTGCGCCTTTTTGTAAAATT
GCCAGAGCTACTTGCTTCTGTCAATATGGAGGAAGATGCGTTGAACAAGCTACAGCTGAA
ACTGCTGGACGTTCTCAAGTTTCTTCAGAAGAATCAGATCACCTTCTTTACCTCTGCGTA
CGATGGTTCTTGTAAAGGTGCAGATGAGGATAAAACCAAATGATTGCATGTGAACGTTTT
ATATCATGTAACATCTTTCGATGGACTTGTCTGGCACTATTGTTGATATGAATGTCGCTT
AGGACAACAATCGGTTTATGTAGGATAGATGCTGCAGATTCCTGAAAGACGGTACTTGAA
CTGCCCGGAGCATGTTGTATTTTCTTAAGATGCTGGAACTAAGACGGCTTAGTTGAATTT
TCACTATCAAGTGAGTCTCGGTCTTGCCCCAAAAAGAATGTTTTGTACCTCCTCTGTCCC
AATTTATACGACAATTTATAATTCGTATGACTTTTTTGGACCAA