Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015901_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:129970267:129970968:-1 gene:Zm00001d015901 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 3
Sequence

ATGGCTCCCAAGATCCTAGTCATCCTTGTGTTCCTCGCCGTGGCCTCACCGGCGGCTCTG
GCCGCCTTCGATGTGATAGAGATGCTGGCCGACAAGCCCACGTACTCCACGTTCCTGAAG
CTCCTGCAGGACACCAAGGTCGCGGGCGAGGCGAATCAGCTCCGGTCGGCGACGCTACTG
GTCGTCCCCGACAAACTTGCCAAGCCTCTGGCGTCGCTGCCCGCCGATAAGGTGCGGCCG
GCGGTGGAGAACCACGTCCTTCTCAGTTACTTCGACCCCATCAAGCTGGACGAGATGAAG
ACACGCACCGCCATCCTCCCCACGCTGCTCTCCGTCACCGACAAGAAACTCGGCGTCCTC
AACTACACCAGGGCCGACGACGGGCAGATGTACTTCGGCGCTCCCGGCGCCCCCTGCGTG
GCCAAGCTCGTGAAGGTCGTCGCAGCGCGGCCGTACTCTGTGTCCATCATGGAGATCAGC
GAGCCCATTTTGCCGGCCGCGTTGCCCTCCCCCGTCGCGGCGCCCGGCCGCCGCGGCAAG
GGTGGTAAGCGCAAGATCAAGCCATCAGCGGCAACCCATGAGGATTCCAACATGATCCCG
CGCAAGCCCGTCGAAGCAGTGGTGGTGGGTAAGGGTAAGGTGGCCAAGGATACCGTGTCC
GAGTCACCTGCTCCAAGCCCCGCCCCCGTCTCCGCCCCTTAG

Peptide Sequence

PEP ID

Zm00001d015901_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:129970267:129970968:-1 gene:Zm00001d015901 transcript:Zm00001d015901_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 3
Sequence

MAPKILVILVFLAVASPAALAAFDVIEMLADKPTYSTFLKLLQDTKVAGEANQLRSATLL
VVPDKLAKPLASLPADKVRPAVENHVLLSYFDPIKLDEMKTRTAILPTLLSVTDKKLGVL
NYTRADDGQMYFGAPGAPCVAKLVKVVAARPYSVSIMEISEPILPAALPSPVAAPGRRGK
GGKRKIKPSAATHEDSNMIPRKPVEAVVVGKGKVAKDTVSESPAPSPAPVSAP

Transcript Sequence

Transcript ID

Zm00001d015901_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:129970267:129970968:-1 gene:Zm00001d015901 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 3
Sequence

ATGGCTCCCAAGATCCTAGTCATCCTTGTGTTCCTCGCCGTGGCCTCACCGGCGGCTCTG
GCCGCCTTCGATGTGATAGAGATGCTGGCCGACAAGCCCACGTACTCCACGTTCCTGAAG
CTCCTGCAGGACACCAAGGTCGCGGGCGAGGCGAATCAGCTCCGGTCGGCGACGCTACTG
GTCGTCCCCGACAAACTTGCCAAGCCTCTGGCGTCGCTGCCCGCCGATAAGGTGCGGCCG
GCGGTGGAGAACCACGTCCTTCTCAGTTACTTCGACCCCATCAAGCTGGACGAGATGAAG
ACACGCACCGCCATCCTCCCCACGCTGCTCTCCGTCACCGACAAGAAACTCGGCGTCCTC
AACTACACCAGGGCCGACGACGGGCAGATGTACTTCGGCGCTCCCGGCGCCCCCTGCGTG
GCCAAGCTCGTGAAGGTCGTCGCAGCGCGGCCGTACTCTGTGTCCATCATGGAGATCAGC
GAGCCCATTTTGCCGGCCGCGTTGCCCTCCCCCGTCGCGGCGCCCGGCCGCCGCGGCAAG
GGTGGTAAGCGCAAGATCAAGCCATCAGCGGCAACCCATGAGGATTCCAACATGATCCCG
CGCAAGCCCGTCGAAGCAGTGGTGGTGGGTAAGGGTAAGGTGGCCAAGGATACCGTGTCC
GAGTCACCTGCTCCAAGCCCCGCCCCCGTCTCCGCCCCTTAG