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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015895_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:129806383:129807308:1 gene:Zm00001d015895 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

ATGGGGTCCTCGTCCTCGCCACCGCCACCACCGCCGCTGCCACTGCCCATGATTGGGCGG
GCCGGGAACCTCACCATCTTCATCACGCCGCCATCCCCCGCTAGCACGCCCCGGGGCGCT
GGGCGCACGCCGCCGCTCGAGTCCCCGCGCTCGGATATCTCCACACCCATCCCGCAGAGG
GCAGCCCCGTCGCCCTCCCTTTCTCCCTCTCCGCGGAACCACGAGAGCCGGGCCGTGGCG
CCTGCGGTGGTGTTCACCCCGCCCCCGCCGCCTGCTTCTGTGAATGTCGCGCTGCCGCCG
GTGCAGGTGCCGCCGCCGCAGTACGAGAAGGCGTCCGCGGGGGGCAAGCATGACGTATCG
GCGTTCGGCTTCTTCTGGGACGCCGTCGCGCGCGTCCAGGAAGCGCACGCGAGCCTCGAC
GAGTACGTGTCTACCTGGTTCGGGTTGGATCAGTCCAAGTACCAGTGGGCGCTTAACGAC
TACTACGAGACCATAGGCAAGGTCAGCAAGGTTTGA

Peptide Sequence

PEP ID

Zm00001d015895_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:129806383:129807308:1 gene:Zm00001d015895 transcript:Zm00001d015895_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

MGSSSSPPPPPPLPLPMIGRAGNLTIFITPPSPASTPRGAGRTPPLESPRSDISTPIPQR
AAPSPSLSPSPRNHESRAVAPAVVFTPPPPPASVNVALPPVQVPPPQYEKASAGGKHDVS
AFGFFWDAVARVQEAHASLDEYVSTWFGLDQSKYQWALNDYYETIGKVSKV

Transcript Sequence

Transcript ID

Zm00001d015895_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:129806383:129807308:1 gene:Zm00001d015895 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence

GAGCGCCCCCCCTGCCCTGCCCATTTCGCTCTCCTCCCTAGGCAACTAAACGCCGCGCTC
CCGCAGACGGTACCAGCCGCCGCGATGGGGTCCTCGTCCTCGCCACCGCCACCACCGCCG
CTGCCACTGCCCATGATTGGGCGGGCCGGGAACCTCACCATCTTCATCACGCCGCCATCC
CCCGCTAGCACGCCCCGGGGCGCTGGGCGCACGCCGCCGCTCGAGTCCCCGCGCTCGGAT
ATCTCCACACCCATCCCGCAGAGGGCAGCCCCGTCGCCCTCCCTTTCTCCCTCTCCGCGG
AACCACGAGAGCCGGGCCGTGGCGCCTGCGGTGGTGTTCACCCCGCCCCCGCCGCCTGCT
TCTGTGAATGTCGCGCTGCCGCCGGTGCAGGTGCCGCCGCCGCAGTACGAGAAGGCGTCC
GCGGGGGGCAAGCATGACGTATCGGCGTTCGGCTTCTTCTGGGACGCCGTCGCGCGCGTC
CAGGAAGCGCACGCGAGCCTCGACGAGTACGTGTCTACCTGGTTCGGGTTGGATCAGTCC
AAGTACCAGTGGGCGCTTAACGACTACTACGAGACCATAGGCAAGGTCAGCAAGGTTTGA