Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015893_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:5:129691664:129697080:1 gene:Zm00001d015893 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence	ATGCGGGATGTCGATCAGGATACTGGGAAAGACCTCCTGCCGATGCAGCGAGGTGGGGAT GATGCACCAAGGGTGAACCCATCTGGTGGCAGGGGCAGTGGCATGGGATCTGGCAAGAGG TTGGGTTTGTCAGGTATTGTGATCACGGAGGAGGATGAGGCAGCCCCAACATCAAGACGA CCACTCAAGAGAATGAGCTCGCCAGAGAGGTGGGAAGCAAAACAGCTTATTGCCTCGGGT GTGCTGGATGTGAGGGATTATCCAATGTTTGATGAGGATGGGGATGGTATGATGTACCAG GAGGAAGGTGCAGAAGAAGAACTTGAAATTGAGCTAAATGAGGATGAACCAGCATTCTTG CAGGGGCAGAGCAGATTTTCAATAGACATGTCACCTGTAAAGATCTTTAAGAATCCTGAG GGTTCATTGAGCCGAGCAGCAGCCCTACAGACTGCTCTCATAAAGGAACGTCGTGAGGTT CGAGAACAGGAGCAGAGAGCCATGTTAGATTCAATCCCCAAGGATCTGAATCGACCATGG GAGGACCCAATGCCTGATACAGGTGAGCGGCACCTTGCACAGGAGCTGCGAGGTGTTGGC CTTTCAGCTTATGACATGCCTGAATGGAAGAAGGAGGCCTATGGAAAAGCTTTAACTTTT GGGCAAAGGTCAAAGCTTTCAATACAAGAGCAGAGGCAGTCTCTTCCTATTTACAAGTTG AAGAAAGAGCTTATACAAGCTGTACATGATAATCAAGTTTTGGTTGTTATTGGAGAGACT GGTTCCGGGAAGACGACGCAGGTGACACAATATTTGGCTGAGGCAGGTTATACCACGCGG GGTAAAATCGGGTGTACTCAGCCTCGTAGGGTGGCTGCAATGTCAGTTGCAAAGAGAGTG GCAGAAGAGTTTGGTTGTCGGCTGGGAGAGGAAGTTGGTTATGCTATCCGTTTCGAGGAC TGTACGGGTCCGGACACAGTGATTAAGTACATGACTGATGGTATGCTTCTGCGTGAAATT CTTGTTGATGAGAACCTTTCCCAGTATTCTGTTATCATGCTTGATGAAGCCCATGAAAGG ACCATCCACACTGATGTGCTCTTTGGTTTGCTGAAACAACTTATTAAGCGCAGATCTGAT ATGAGGCTTATTGTTACTTCTGCCACCCTTGATGCTGAAAAGTTCTCAGGATATTTCTTT AACTGTAACATCTTCACAATTCCTGGAAGAACATTCCCAGTAGAGATACTGTACACTAAA CAACCTGAAAGTGATTACTTGGATGCAGCATTGATTACTGTGCTGCAGATTCACTTGACA GAGCCAGAAGGAGACATCCTTGTTTTCCTGACAGGGCAGGAGGAAATCGATCATGCCTGC CAGTGTCTTTATGAGAGGATGAAGGGGCTGGGCAGGGATGTTCCTGAGCTCATAATCTTG CCTGTGTATAGTGCCCTTCCTAGTGAGATGCAATCAAAGATCTTTGACCCAGCTCCACCT GGTAAGAGGAAAGTTGTGGTAGCGACCAATATTGCTGAAGCTTCTTTGACAATTGATGGT ATATACTATGTTGTGGATCCTGGTTTTGCCAAAATCAATGTATACAATTCAAAACAGGGT CTTGATTCATTGGTCATCACTCCGATATCACAAGCGTCTGCGAAACAAAGAGCAGGGCGT GCAGGGCGTACTGGACCTGGCAAGTGTTATCGTCTATACACTGAAAGTGCCTACCGGAAT GAGATGTCCCCCACAACGATTCCAGAAATACAGAGGATCAACTTGGGATCTACCGTTCTT AATATGAAGGCAATGGGAATAAATGACCTGTTATCCTTTGATTTTATGGACCCCCCAGCA CCTCAAGCATTGATTTCTGCCATGGAACAGTTGTACAGCCTTGGTGCTCTTGATGAAGAG GGCCTTCTAACCAAACTCGGGAGAAAAATGGCAGAATTTCCATTGGATCCACCACTTTCC AAGATGCTACTAGCCAGTGTTGACCTTGGATGCAGTGATGAGATACTGACTATCATAGCT ATGATTCAAACAGGGAATATATTCTACAGGCCACGAGAAAAACAAGCTCAAGCTGATCAA AAGAGGGCTAAATTTTTTCAGCCAGAGGGAGACCACCTTACTCTACTTGCTGTATATGAG GCCTGGAAGGCTAAGAACTTTTCAGGGCCCTGGTGTTTTGAGAACTTTGTTCAATCAAGA TCATTGAGGAGAGCCCAGGATGTGAGGAAACAACTTCTCACTATCATGGACAGGCTTCTT TTTCCACGCCGCCAGGAAGGATCCCCAGGAAGGATACAGGACCTTGGTCGAAAACCAGCC AGTGTACATCCACCCTAG

Peptide Sequence

PEP ID	Zm00001d015893_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:5:129691664:129697080:1 gene:Zm00001d015893 transcript:Zm00001d015893_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence	MRDVDQDTGKDLLPMQRGGDDAPRVNPSGGRGSGMGSGKRLGLSGIVITEEDEAAPTSRR PLKRMSSPERWEAKQLIASGVLDVRDYPMFDEDGDGMMYQEEGAEEELEIELNEDEPAFL QGQSRFSIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPW EDPMPDTGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQEQRQSLPIYKL KKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRV AEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHER TIHTDVLFGLLKQLIKRRSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTK QPESDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDHACQCLYERMKGLGRDVPELIIL PVYSALPSEMQSKIFDPAPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKINVYNSKQG LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVL NMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLS KMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYE AWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRLLFPRRQEGSPGRIQDLGRKPA SVHPP

Transcript Sequence

Transcript ID	Zm00001d015893_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:129691664:129697080:1 gene:Zm00001d015893 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
Sequence	GACACCAGCACCACCCTCAGCCATGGCGCCAGCGGCGGCGGAGGCTGGTCCCGGCGATGA CGGGCTTAGGAAGCTCGAATACCTTTCCCTGGTCTCCAAAGTTTGCTCCGAGCTCGAGAC CCACATCGGCGTCGGCGACAAGGTGCTGGCCGAGTTCATCACCGAGCTCGGCCGCGACTC CACAACCGTCCCCGAGTTCGACGCCAAGCTCAAGGAGAAGGGCGCCGACTTCCCCGACTA CTTCGTCCGTACGCTCCTCACCATCATCCACGCCATCCTCCAGCCTACTGCTTCCAACCC TAGCGCTGCCACCGTCGCCGAGGGCCCTGCTGGTGCGGAGTCGGCCAAATTCCCCGGGCT CGCCCGCCCCGACGACCCCGACCATGCCCGCAACCTCCGCCTCGAGCTCGAGCGGGATGC CGATGCGGCCCCTCCTGCTCCGATGAGGGACGACCGCGACCGCCGCTGGGATGGGAGAGG CCGAGACCGGGACTACGGCCGCGGCGGCCGTGAGCATGATCAAGACCGCGGTGGCCGTGA CCACGATCGTGACCGCCGTGACAGGGATCGAGGGCGCGACCGCGAGTATGGCCGTGATAG GGATCGAGGGCGCGACCGTGAGTATGGCCATGATAGGGATCGAGGGCGCGACCGTGAGTA TGGCCGTGATAGGGATCATGACCATGTCCGGGATCGTGACGGGGAACGCCTCCACGATGG AGATAGAGATACTGGTAGGAACAGAGTTAGGGACTTGGGGAGGAGCAGGAGGTATGCAGA TGATGAAGAAGAGGAGAGGGGCAATGTAGGAAGGGGAAGGGAGGTTGCTGTTTCGAATCC CAGTGGGGAGCCAGAGCTGTACCAGGTGTACCGAGGGAGGGTTACCCGGGTGATGGATAC CGGATGCTTTGTCAGGCTTGATGATGTTCGCGGTGGCCACGAGGGACTTGTTCATGTATC GCAGATGCAAAGGAGGTGGTGAAGCGTGACCAGGAGGTGTATGTGAAGGTAGTCTCGGTG AAGGGGCAGAAGTTGAGTTTGTCGATGCGGGATGTCGATCAGGATACTGGGAAAGACCTC CTGCCGATGCAGCGAGGTGGGGATGATGCACCAAGGGTGAACCCATCTGGTGGCAGGGGC AGTGGCATGGGATCTGGCAAGAGGTTGGGTTTGTCAGGTATTGTGATCACGGAGGAGGAT GAGGCAGCCCCAACATCAAGACGACCACTCAAGAGAATGAGCTCGCCAGAGAGGTGGGAA GCAAAACAGCTTATTGCCTCGGGTGTGCTGGATGTGAGGGATTATCCAATGTTTGATGAG GATGGGGATGGTATGATGTACCAGGAGGAAGGTGCAGAAGAAGAACTTGAAATTGAGCTA AATGAGGATGAACCAGCATTCTTGCAGGGGCAGAGCAGATTTTCAATAGACATGTCACCT GTAAAGATCTTTAAGAATCCTGAGGGTTCATTGAGCCGAGCAGCAGCCCTACAGACTGCT CTCATAAAGGAACGTCGTGAGGTTCGAGAACAGGAGCAGAGAGCCATGTTAGATTCAATC CCCAAGGATCTGAATCGACCATGGGAGGACCCAATGCCTGATACAGGTGAGCGGCACCTT GCACAGGAGCTGCGAGGTGTTGGCCTTTCAGCTTATGACATGCCTGAATGGAAGAAGGAG GCCTATGGAAAAGCTTTAACTTTTGGGCAAAGGTCAAAGCTTTCAATACAAGAGCAGAGG CAGTCTCTTCCTATTTACAAGTTGAAGAAAGAGCTTATACAAGCTGTACATGATAATCAA GTTTTGGTTGTTATTGGAGAGACTGGTTCCGGGAAGACGACGCAGGTGACACAATATTTG GCTGAGGCAGGTTATACCACGCGGGGTAAAATCGGGTGTACTCAGCCTCGTAGGGTGGCT GCAATGTCAGTTGCAAAGAGAGTGGCAGAAGAGTTTGGTTGTCGGCTGGGAGAGGAAGTT GGTTATGCTATCCGTTTCGAGGACTGTACGGGTCCGGACACAGTGATTAAGTACATGACT GATGGTATGCTTCTGCGTGAAATTCTTGTTGATGAGAACCTTTCCCAGTATTCTGTTATC ATGCTTGATGAAGCCCATGAAAGGACCATCCACACTGATGTGCTCTTTGGTTTGCTGAAA CAACTTATTAAGCGCAGATCTGATATGAGGCTTATTGTTACTTCTGCCACCCTTGATGCT GAAAAGTTCTCAGGATATTTCTTTAACTGTAACATCTTCACAATTCCTGGAAGAACATTC CCAGTAGAGATACTGTACACTAAACAACCTGAAAGTGATTACTTGGATGCAGCATTGATT ACTGTGCTGCAGATTCACTTGACAGAGCCAGAAGGAGACATCCTTGTTTTCCTGACAGGG CAGGAGGAAATCGATCATGCCTGCCAGTGTCTTTATGAGAGGATGAAGGGGCTGGGCAGG GATGTTCCTGAGCTCATAATCTTGCCTGTGTATAGTGCCCTTCCTAGTGAGATGCAATCA AAGATCTTTGACCCAGCTCCACCTGGTAAGAGGAAAGTTGTGGTAGCGACCAATATTGCT GAAGCTTCTTTGACAATTGATGGTATATACTATGTTGTGGATCCTGGTTTTGCCAAAATC AATGTATACAATTCAAAACAGGGTCTTGATTCATTGGTCATCACTCCGATATCACAAGCG TCTGCGAAACAAAGAGCAGGGCGTGCAGGGCGTACTGGACCTGGCAAGTGTTATCGTCTA TACACTGAAAGTGCCTACCGGAATGAGATGTCCCCCACAACGATTCCAGAAATACAGAGG ATCAACTTGGGATCTACCGTTCTTAATATGAAGGCAATGGGAATAAATGACCTGTTATCC TTTGATTTTATGGACCCCCCAGCACCTCAAGCATTGATTTCTGCCATGGAACAGTTGTAC AGCCTTGGTGCTCTTGATGAAGAGGGCCTTCTAACCAAACTCGGGAGAAAAATGGCAGAA TTTCCATTGGATCCACCACTTTCCAAGATGCTACTAGCCAGTGTTGACCTTGGATGCAGT GATGAGATACTGACTATCATAGCTATGATTCAAACAGGGAATATATTCTACAGGCCACGA GAAAAACAAGCTCAAGCTGATCAAAAGAGGGCTAAATTTTTTCAGCCAGAGGGAGACCAC CTTACTCTACTTGCTGTATATGAGGCCTGGAAGGCTAAGAACTTTTCAGGGCCCTGGTGT TTTGAGAACTTTGTTCAATCAAGATCATTGAGGAGAGCCCAGGATGTGAGGAAACAACTT CTCACTATCATGGACAGGCTTCTTTTTCCACGCCGCCAGGAAGGATCCCCAGGAAGGATA CAGGACCTTGGTCGAAAACCAGCCAGTGTACATCCACCCTAGCAGCGCATTGTTCCAGCG CCAGCCAGACTGGGTCATCTATCACGAGCTGGTGATGACGACAAAGGAGTACATGAGGGA GGTGACTGTGATCGATCCAAAATGGCTTGTTGAGCTGGCGCCAAGGTTTTACAAGGGTGC TGACCCCACCAAGATGAGCAAAAGGAAAAGGCAGGAGAGGATCGAGCCTCTATATGATAG ATACCACGAGCCCAACTCTTGGCGTCTTAGCAAGCGCCGAGCTTGATTGTAACTCACTGT AACTGTGCACTGCATGCTCTTCATGGCCAGTTGATACTCCATAATGTAAATGTTTGTGAG TTGTC