Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015852_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:5:126372644:126375965:1 gene:Zm00001d015852 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase11 description: lipoxygenase11
Sequence	ATGATTCAGATGTACTTCCAGCGCGCCCTCGACGACGCCGGCGACTTCTTCGGCAAGACG CTGCTGATGGAACTCGTCAGCTCCGAGGTCGACGCAAAGACGGGTCTGGAGAAGCCGCGG GTGACGGCGTTCGCTCACAAGACGCTGCGGGAGGGCCACTACGAGGCGGAGTTCAAGGTG CCGGCGTCGTTCGGGCCCGTGGGCGCGGTGCTGCTGGAGAACGAGCACCACAAGGAGATC TTCATCAGGGAGATCAAGCTCGTCACGGGCAGCGACAGCAGCACCGCCGTCACCTTCGGC TGCAACTCCTGGGTGCACTCCAAGTTCGACAACCCGGAGAAGCGCATCTTCTTCACCCTC AAGTCCTACCTGCCGTCCGACACGCCCAAGGGCCTGGAGGACCTGAGGAAGAAGGACCTG CAGGCGCTTCGGGGCGACGGCCACGGCGAGCGCAAGGCGTCCGAGCGCGTCTACGACTAC GACGTGTACAACGACCTGGGCGACCCGGACAAGAACCCCGCCCACCAGCGGCCCGTGCTG GGCGGCAGCAAGCGGTACCCGTACCCGCGCCGCTGCCGCACCGGTCGCCCCAGGACCAGG AAGGACCCCGAGGCGGAGGTGCGCCATGGGCACAACTACGTGCCCCGCGACGAGCAGTTC TCGGAGGTCAAGCAGCTCACGTTCGGGGCCACGACGCTGCGCTCGGGCCTGCACGCGCTG CTCCCGGCCATCAGGCCGATGCTCATCAAGAGGGAGCTGCGCTTCCCGCACTTCCCGGCC ATCGACGACCTCTACAGCGACGGCATCCCGCTGCCGGCGCAGACCGGGTTGGGCGCCATC CGCAGCATCGTCCCGCGCGTGGTCAAGCTGGTGGAGGACACCACCGAGCACGTCCTCCGC TTCGAGCTGCCGGACATGATAGAGAGAGACCGCTTCTCGTGGTTCAAAGACGAGGAGTTC GCGAGGCAGACGATCGCGGGGCTCAACCCGCTGTGCATCCAGCTCCTGACGGAGTTCCCC ATCAGGAGCAAGCTGGACCCGGAGGTGTACGGCCCGGCGGAGTCCGCCATCACCAAGGAG ATCCTGGAGAAGCACATGAGCGGCGGCGCCGCCATGACCGTGGAGCAGGCGCTCGCGGCG AAGCGTCTGTTCATCCTGGACTACCACGACGTGTTCCTGCCCTACGTGCACAGGGTGCGC GAGCTGCCGGACACGACGCTCTACGGCTCCCGCACCGTCTTCTTCCTCACGGACCTGGGC ACGCTGATGCCGCTGGCCATCGAGCTGGTGCGGCCCAAATCGCCGACGCAGCCGCAGTGG AAGCGGGTGTTCACGCACGGGCCCGACGCCACCGACGCCTGGCTGTGGAAGCTTGCCAAG GCGCACGTGGTGACCCACGACACGGGGTACCACCAGCTGGTGAGCCACTGGCTGCGCACG CACTGCTGCGTGGAGCCCTACATCATTGCCGCGAACCGGCAGCTCAGCCGGCTGCACCCG GTGTACCGCCTCCTGCACCCGCACTTCCGCTACACCATGGAGATCAACGCGCTGGCCAGG GAGGCGCTCATCAACGCCGACGGCATCATCGAGGAGTCCTTCTGGCCGGGCAGGTACGCC GTCGAGCTCAGCTCAGCGGCGTACGGCGCCACGTGGCAGTTCGACACGGAGGCGCTGCCC AACGACCTCGTCAAGCGTGGGCTCGCCGTGCGCCGGGACGACGGCGAGCTGGAGCTCACC ATCAAGGACTACCCCTACGCGCACGACGGGCTCATGGTCTGGAACACCATAAGGCAGTGG GCGGCCGACTACGTCAACGTCTACTACAAGTCCGACGAGGCCGTCGCCGCCGACCCCGAG CTGAAGGCGTTCTGGGACGAGGTGCGCAACGTGGGCCACGGCGACAAGAAGGACGAGCCG TGGTGGCCCGTGCTCGACACCCGCGACAGCCTCGCGGAGACGCTCACCACCATCATGTGG GTCACCTCCGGCCACCACTCGGCGGTCAACTTCGGGCAGTACCACTTCGGCGGATACTTC CCGAACCGCCCGACCACCATCCGGAAGAGCATGCCCGTGGAGGAGGAGGCGGGCCGGGAC GAAGAGATGAAGAAGTTCCTGAAGCAGCCGGAGACGACCCTGCTGGACATGCTGCCGACG CAGATGCAGGCCATCAGGGTGATGACGACGCTGGACATCCTCTCGTCGCACTCGCCCGAC GAGGAGTACATGGGAGAGTTGGCGGAGCCGTCGTGGCTGGAGGAGCCCATGGTGAAGGCG GCGTTCGAGAAGTTCGGCGGCAGGATGAAGGAGATCGAGGGATTCATCGACGAGTGCAAC AACAACCCGGAGCTCAGGAACCGGTGCGGAGCAGGGATCGTGCCGTACGAACTGCTCAAG CCCTTCTCCAAGCCGGGAGTCACCGGGAGGGGCATCCCCAACAGCATCTCCATTTGA

Peptide Sequence

PEP ID	Zm00001d015852_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:5:126372644:126375965:1 gene:Zm00001d015852 transcript:Zm00001d015852_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase11 description: lipoxygenase11
Sequence	MIQMYFQRALDDAGDFFGKTLLMELVSSEVDAKTGLEKPRVTAFAHKTLREGHYEAEFKV PASFGPVGAVLLENEHHKEIFIREIKLVTGSDSSTAVTFGCNSWVHSKFDNPEKRIFFTL KSYLPSDTPKGLEDLRKKDLQALRGDGHGERKASERVYDYDVYNDLGDPDKNPAHQRPVL GGSKRYPYPRRCRTGRPRTRKDPEAEVRHGHNYVPRDEQFSEVKQLTFGATTLRSGLHAL LPAIRPMLIKRELRFPHFPAIDDLYSDGIPLPAQTGLGAIRSIVPRVVKLVEDTTEHVLR FELPDMIERDRFSWFKDEEFARQTIAGLNPLCIQLLTEFPIRSKLDPEVYGPAESAITKE ILEKHMSGGAAMTVEQALAAKRLFILDYHDVFLPYVHRVRELPDTTLYGSRTVFFLTDLG TLMPLAIELVRPKSPTQPQWKRVFTHGPDATDAWLWKLAKAHVVTHDTGYHQLVSHWLRT HCCVEPYIIAANRQLSRLHPVYRLLHPHFRYTMEINALAREALINADGIIEESFWPGRYA VELSSAAYGATWQFDTEALPNDLVKRGLAVRRDDGELELTIKDYPYAHDGLMVWNTIRQW AADYVNVYYKSDEAVAADPELKAFWDEVRNVGHGDKKDEPWWPVLDTRDSLAETLTTIMW VTSGHHSAVNFGQYHFGGYFPNRPTTIRKSMPVEEEAGRDEEMKKFLKQPETTLLDMLPT QMQAIRVMTTLDILSSHSPDEEYMGELAEPSWLEEPMVKAAFEKFGGRMKEIEGFIDECN NNPELRNRCGAGIVPYELLKPFSKPGVTGRGIPNSISI

Transcript Sequence

Transcript ID	Zm00001d015852_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:126372644:126375965:1 gene:Zm00001d015852 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase11 description: lipoxygenase11
Sequence	CGCGCTCGGTCGACTACTGGCTAGCTTGTTTCAGTCGTCCGATCTGATCTACAGAAAAAG CAGGGGCAGGGCAGCTAGCCATGATTCAGATGTACTTCCAGCGCGCCCTCGACGACGCCG GCGACTTCTTCGGCAAGACGCTGCTGATGGAACTCGTCAGCTCCGAGGTCGACGCAAAGA CGGGTCTGGAGAAGCCGCGGGTGACGGCGTTCGCTCACAAGACGCTGCGGGAGGGCCACT ACGAGGCGGAGTTCAAGGTGCCGGCGTCGTTCGGGCCCGTGGGCGCGGTGCTGCTGGAGA ACGAGCACCACAAGGAGATCTTCATCAGGGAGATCAAGCTCGTCACGGGCAGCGACAGCA GCACCGCCGTCACCTTCGGCTGCAACTCCTGGGTGCACTCCAAGTTCGACAACCCGGAGA AGCGCATCTTCTTCACCCTCAAGTCCTACCTGCCGTCCGACACGCCCAAGGGCCTGGAGG ACCTGAGGAAGAAGGACCTGCAGGCGCTTCGGGGCGACGGCCACGGCGAGCGCAAGGCGT CCGAGCGCGTCTACGACTACGACGTGTACAACGACCTGGGCGACCCGGACAAGAACCCCG CCCACCAGCGGCCCGTGCTGGGCGGCAGCAAGCGGTACCCGTACCCGCGCCGCTGCCGCA CCGGTCGCCCCAGGACCAGGAAGGACCCCGAGGCGGAGGTGCGCCATGGGCACAACTACG TGCCCCGCGACGAGCAGTTCTCGGAGGTCAAGCAGCTCACGTTCGGGGCCACGACGCTGC GCTCGGGCCTGCACGCGCTGCTCCCGGCCATCAGGCCGATGCTCATCAAGAGGGAGCTGC GCTTCCCGCACTTCCCGGCCATCGACGACCTCTACAGCGACGGCATCCCGCTGCCGGCGC AGACCGGGTTGGGCGCCATCCGCAGCATCGTCCCGCGCGTGGTCAAGCTGGTGGAGGACA CCACCGAGCACGTCCTCCGCTTCGAGCTGCCGGACATGATAGAGAGAGACCGCTTCTCGT GGTTCAAAGACGAGGAGTTCGCGAGGCAGACGATCGCGGGGCTCAACCCGCTGTGCATCC AGCTCCTGACGGAGTTCCCCATCAGGAGCAAGCTGGACCCGGAGGTGTACGGCCCGGCGG AGTCCGCCATCACCAAGGAGATCCTGGAGAAGCACATGAGCGGCGGCGCCGCCATGACCG TGGAGCAGGCGCTCGCGGCGAAGCGTCTGTTCATCCTGGACTACCACGACGTGTTCCTGC CCTACGTGCACAGGGTGCGCGAGCTGCCGGACACGACGCTCTACGGCTCCCGCACCGTCT TCTTCCTCACGGACCTGGGCACGCTGATGCCGCTGGCCATCGAGCTGGTGCGGCCCAAAT CGCCGACGCAGCCGCAGTGGAAGCGGGTGTTCACGCACGGGCCCGACGCCACCGACGCCT GGCTGTGGAAGCTTGCCAAGGCGCACGTGGTGACCCACGACACGGGGTACCACCAGCTGG TGAGCCACTGGCTGCGCACGCACTGCTGCGTGGAGCCCTACATCATTGCCGCGAACCGGC AGCTCAGCCGGCTGCACCCGGTGTACCGCCTCCTGCACCCGCACTTCCGCTACACCATGG AGATCAACGCGCTGGCCAGGGAGGCGCTCATCAACGCCGACGGCATCATCGAGGAGTCCT TCTGGCCGGGCAGGTACGCCGTCGAGCTCAGCTCAGCGGCGTACGGCGCCACGTGGCAGT TCGACACGGAGGCGCTGCCCAACGACCTCGTCAAGCGTGGGCTCGCCGTGCGCCGGGACG ACGGCGAGCTGGAGCTCACCATCAAGGACTACCCCTACGCGCACGACGGGCTCATGGTCT GGAACACCATAAGGCAGTGGGCGGCCGACTACGTCAACGTCTACTACAAGTCCGACGAGG CCGTCGCCGCCGACCCCGAGCTGAAGGCGTTCTGGGACGAGGTGCGCAACGTGGGCCACG GCGACAAGAAGGACGAGCCGTGGTGGCCCGTGCTCGACACCCGCGACAGCCTCGCGGAGA CGCTCACCACCATCATGTGGGTCACCTCCGGCCACCACTCGGCGGTCAACTTCGGGCAGT ACCACTTCGGCGGATACTTCCCGAACCGCCCGACCACCATCCGGAAGAGCATGCCCGTGG AGGAGGAGGCGGGCCGGGACGAAGAGATGAAGAAGTTCCTGAAGCAGCCGGAGACGACCC TGCTGGACATGCTGCCGACGCAGATGCAGGCCATCAGGGTGATGACGACGCTGGACATCC TCTCGTCGCACTCGCCCGACGAGGAGTACATGGGAGAGTTGGCGGAGCCGTCGTGGCTGG AGGAGCCCATGGTGAAGGCGGCGTTCGAGAAGTTCGGCGGCAGGATGAAGGAGATCGAGG GATTCATCGACGAGTGCAACAACAACCCGGAGCTCAGGAACCGGTGCGGAGCAGGGATCG TGCCGTACGAACTGCTCAAGCCCTTCTCCAAGCCGGGAGTCACCGGGAGGGGCATCCCCA ACAGCATCTCCATTTGACCCGTCCGTCCTCTCCATCCAATGGGGGTTTGCCTTATTGCGT GCACGCTAGCTAGCTGCTTGGAAATAAAAATAATTAAAATAAAAGGTCTCGTCTGTACTA TTGTATTGTACCATGGATCATATCGTACATGTTGTGTCAATGCAAAGAGGCACGTTTGAG TTAC