Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015829_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:5:124544275:124549833:-1 gene:Zm00001d015829 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

ATGATCACAGCCACAGGCATGGAGCGGAATGGCGAGAGCCACCTCAAGGACCCGCTTCTG
CCGACGACATCTGGCGCCTCTCCTGCTGGGGCGTCTCCAAGGAAGGAGAGGAAGACGAGG
AAGGTCCTGTTCAGTGTCCGGGGCATCTCCTGCGCTTCTTGTGCCGTGTCGATTGAGACC
GTTGTGGCCGGCTTGAACGGGGTGGAGAGCATCCAGGTCTCCTCACTTCAGGGCCAGGCC
GTGGTTCAGTACAGGCCAGAGGAAACTGATGCAAGAACCATAAAAGAAGCTATTGAGGAC
CTCAACTTTGAGGTTGATGAACTTCAAGAACAAGAAATTGCTGTGTGCAGACTACGCATA
AAAGGAATGGCTTGTACAAGCTGTTCTGAATCTGTTGAACGGGCGCTTCAAATGGTACCT
GGAGTTAAGAAAGCTGCAGTGGGTCTTGCTCTAGAGGAAGCCAAGGTCCATTACGATCCA
AATGTCACTAGTCGTGATCGCATAATTGAAGCTGTTGAAGATGCTGGATTTGGTGCCGAT
CTCATTAGTTCTGGGGATGATGTGAACAAAGTGCATCTAAAGCTTGAGGGTGTGAATTCT
CCAGAAGACACCATACTCATCCAGTCTGTACTGGAAGCTGTGGAAGGGGTGAACAATGTT
GAATGGGACACAGTTGAGCAGACAATAGAAGTTGCATATGATCCTGATTTCACTGGTCCA
AGATTACTTATTCAGTGCATTCAGGACACTGCACAGCCCCCTAAATGCTTTAATGTTACC
TTGCACTCACCACCAAAGCAAAGAGAAGCAGAGCGCAATCATGAAATTAGGAATTACAGG
AACCAATTTCTTTGGAGCTGCCTGTTTTCGGTTCCTGTATTCCTGTTCTCCATGGTTCTT
CCTATGCTTTCTCCTTTTGGGGATTGGTTGGAGTACAGAATCTGCAACAACATGACAATA
GGCATGCTACTACGGTGGTTGCTGTGTTCCCCAGTTCAGTTTATTGTTGGTTGGAGATTT
TATGTTGGAGCCTATCATGCACTCAAACGAGGATACTCAAACATGGATGTGCTGGTTGCT
TTGGGAACAAATGCTGCTTACTTCTATTCTGTGTATATTGTTCTGAAAGCACTTACATCA
GACTCATTTGAAGGCCAGGACTTCTTTGAAACTAGCGCTATGTTGATATCTTTTATATTG
CTGGGAAAATATCTCGAGATAGTGGCAAAGGGAAAGACATCAGATGCGTTGTCGAAATTG
ACAGAGCTTGCACCAGAAACAGCGTGCCTTCTTACTTTGGACAAGGACGGAAATGCCATT
TCAGAAACAGAGATCAGCACTCAATTACTTCAGAGAAATGATGTCATCAAGATTGTGCCT
GGCACCAAAGTTCCTGTTGACGGCGTTGTCATAAAAGGTCAAAGCCATGTCAATGAAAGT
ATGATAACTGGGGAAGCAAGGCCTATTGCAAAGAAACCAGGCGACAGGGTTATTGGGGGT
ACTGTAAATGATAACGGTTGCATAATTGTTAAGGCGACTCATGTTGGGTCAGAAACAGCT
TTGTCGCAAATAGTCCAGTTGGTTGAAGCTGCTCAACTTGCAAGAGCTCCAGTGCAGAAG
TTAGCAGACAAGATTTCACGTTTTTTTGTTCCAACTGTGGTGGTGGCTGCATTTCTTACA
TGGCTTGGCTGGTTCATACCTGGGCAACTTCACCTCTACCCCCAGCAATGGATCCCAAAG
GCCATGGATAGTTTTGAGCTTGCTTTGCAGTTTGGAATTTCTGTCCTAGTTGTCGCATGC
CCATGTGCTTTGGGACTTGCTACACCAACTGCTGTTATGGTTGCAACTGGTAAAGGTGCT
TCTCAAGGTGTTCTCATTAAGGGTGGAAATGCACTTGAGAAAGCTCATAAGATTAAGGCT
ATCATATTTGATAAAACTGGAACGCTGACAGTTGGTAAACCTTCTGTCGTTCAAACAAAG
GTCTTCTCAAAGATACCACTTCTAGAACTCTGTGATCTGGCTGCTGGTGCTGAGGCAAAC
AGCGAGCATCCTCTATCAAAAGCTATCGTTGAGCACACAAAGAAGCTCAAGGAACAATAT
GGATCTCACAGTGATCACATGATGGAATCTAGGGACTTTGAGGTGCATCCAGGAGCAGGT
GTCAGTGCCCATATCGAAGGCAGGCTGGTTTTGGTTGGAAACAAAAGGCTGATGCAGGAA
TTTGAAGTTCCGTTGAGTCCTGAGGTGGAGGCGTACATGTCCGAAACAGAAGAGCTTGCT
AGGACCTGCGTACTTGTTGCTATCGATAAGATCATCTGTGGGGCCCTCGCTGTTTCGGAT
CCTCTGAAGCCTAAGGCAGGCCAAGTCATTTCTTACCTTAAGTCAATGGGCATCTCCAGT
ATCATGGTGACCGGTGATAATTGGGCTACCGCAAAATCAATTGCAAAGGAAGTTGGGATC
AGCCAGGTGTTTGCCGAGATCGACCCAGTGGGAAAAGCTGAAAAGATCAAAGACTTGCAG
ATGCAAGGGTTGACGGTGGCAATGGTTGGCGATGGGGTAAACGACTCCCCAGCATTGGCG
GCGGCAGACGTGGGCATGGCGATCGGTGCTGGCACAGACGTGGCCATCGAGGCTGCTGAC
ATCGTTCTAATGAAGAGCAACCTTGAGGACGTCATCACCGCCATTGATCTCTCGCGCAAG
ACCCTCTCCAGGATCCGGCTGAACTACGTGTGGGCCCTGGGCTACAACGTCCTGGGCATG
CCGATCGCCGCCGGCGTCCTGTTCCCTTTCACGGGCATCCGGCTGCCCCCTTGGCTCGCC
GGGGCATGCATGGCTGCCTCGTCGGTGAGCGTCGTCTGCTCCTCCCTGCTCCTCCAGCTC
TACAAGAAACCGCTGCACGTTGAAGACGCGCCCAGGCCCAGGGAGGACTCAGATTTGGTG
TGA

Peptide Sequence

PEP ID

Zm00001d015829_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:5:124544275:124549833:-1 gene:Zm00001d015829 transcript:Zm00001d015829_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

MITATGMERNGESHLKDPLLPTTSGASPAGASPRKERKTRKVLFSVRGISCASCAVSIET
VVAGLNGVESIQVSSLQGQAVVQYRPEETDARTIKEAIEDLNFEVDELQEQEIAVCRLRI
KGMACTSCSESVERALQMVPGVKKAAVGLALEEAKVHYDPNVTSRDRIIEAVEDAGFGAD
LISSGDDVNKVHLKLEGVNSPEDTILIQSVLEAVEGVNNVEWDTVEQTIEVAYDPDFTGP
RLLIQCIQDTAQPPKCFNVTLHSPPKQREAERNHEIRNYRNQFLWSCLFSVPVFLFSMVL
PMLSPFGDWLEYRICNNMTIGMLLRWLLCSPVQFIVGWRFYVGAYHALKRGYSNMDVLVA
LGTNAAYFYSVYIVLKALTSDSFEGQDFFETSAMLISFILLGKYLEIVAKGKTSDALSKL
TELAPETACLLTLDKDGNAISETEISTQLLQRNDVIKIVPGTKVPVDGVVIKGQSHVNES
MITGEARPIAKKPGDRVIGGTVNDNGCIIVKATHVGSETALSQIVQLVEAAQLARAPVQK
LADKISRFFVPTVVVAAFLTWLGWFIPGQLHLYPQQWIPKAMDSFELALQFGISVLVVAC
PCALGLATPTAVMVATGKGASQGVLIKGGNALEKAHKIKAIIFDKTGTLTVGKPSVVQTK
VFSKIPLLELCDLAAGAEANSEHPLSKAIVEHTKKLKEQYGSHSDHMMESRDFEVHPGAG
VSAHIEGRLVLVGNKRLMQEFEVPLSPEVEAYMSETEELARTCVLVAIDKIICGALAVSD
PLKPKAGQVISYLKSMGISSIMVTGDNWATAKSIAKEVGISQVFAEIDPVGKAEKIKDLQ
MQGLTVAMVGDGVNDSPALAAADVGMAIGAGTDVAIEAADIVLMKSNLEDVITAIDLSRK
TLSRIRLNYVWALGYNVLGMPIAAGVLFPFTGIRLPPWLAGACMAASSVSVVCSSLLLQL
YKKPLHVEDAPRPREDSDLV

Transcript Sequence

Transcript ID

Zm00001d015829_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:124544275:124549833:-1 gene:Zm00001d015829 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable copper-transporting ATPase HMA5
Sequence

GAAAGAAACAAACAAACCGCCGCACGCGCTAGGGCGAGGCGACCTCGCCGTCTCCACCCC
GCCACCGCCTGCTTCACGCCGCGCTCCCTGCTCCGCGTCGCCTTTATTATAGTCTGATGC
CACTACGCCCGCCAAGGCACCTGCCAATCCCTCCTCTTTCAACTCAAAATCCCCACACCC
CGGGCAGGCGCCCCGCCGCGGGAACAGGGAGACTACTACAGCAGGCGGGGTCCGGGGGCC
GAGAGCTTCTCGCCGCGGCCGCAGTCGTCCGGGACCGAGGTGGGGCGCCCTCCTGCGCCG
GCTCGTGTGCTTCCGCCGCCTCGTCCACAGGCTTCTGGTTCAATTGAATGATCACAGCCA
CAGGCATGGAGCGGAATGGCGAGAGCCACCTCAAGGACCCGCTTCTGCCGACGACATCTG
GCGCCTCTCCTGCTGGGGCGTCTCCAAGGAAGGAGAGGAAGACGAGGAAGGTCCTGTTCA
GTGTCCGGGGCATCTCCTGCGCTTCTTGTGCCGTGTCGATTGAGACCGTTGTGGCCGGCT
TGAACGGGGTGGAGAGCATCCAGGTCTCCTCACTTCAGGGCCAGGCCGTGGTTCAGTACA
GGCCAGAGGAAACTGATGCAAGAACCATAAAAGAAGCTATTGAGGACCTCAACTTTGAGG
TTGATGAACTTCAAGAACAAGAAATTGCTGTGTGCAGACTACGCATAAAAGGAATGGCTT
GTACAAGCTGTTCTGAATCTGTTGAACGGGCGCTTCAAATGGTACCTGGAGTTAAGAAAG
CTGCAGTGGGTCTTGCTCTAGAGGAAGCCAAGGTCCATTACGATCCAAATGTCACTAGTC
GTGATCGCATAATTGAAGCTGTTGAAGATGCTGGATTTGGTGCCGATCTCATTAGTTCTG
GGGATGATGTGAACAAAGTGCATCTAAAGCTTGAGGGTGTGAATTCTCCAGAAGACACCA
TACTCATCCAGTCTGTACTGGAAGCTGTGGAAGGGGTGAACAATGTTGAATGGGACACAG
TTGAGCAGACAATAGAAGTTGCATATGATCCTGATTTCACTGGTCCAAGATTACTTATTC
AGTGCATTCAGGACACTGCACAGCCCCCTAAATGCTTTAATGTTACCTTGCACTCACCAC
CAAAGCAAAGAGAAGCAGAGCGCAATCATGAAATTAGGAATTACAGGAACCAATTTCTTT
GGAGCTGCCTGTTTTCGGTTCCTGTATTCCTGTTCTCCATGGTTCTTCCTATGCTTTCTC
CTTTTGGGGATTGGTTGGAGTACAGAATCTGCAACAACATGACAATAGGCATGCTACTAC
GGTGGTTGCTGTGTTCCCCAGTTCAGTTTATTGTTGGTTGGAGATTTTATGTTGGAGCCT
ATCATGCACTCAAACGAGGATACTCAAACATGGATGTGCTGGTTGCTTTGGGAACAAATG
CTGCTTACTTCTATTCTGTGTATATTGTTCTGAAAGCACTTACATCAGACTCATTTGAAG
GCCAGGACTTCTTTGAAACTAGCGCTATGTTGATATCTTTTATATTGCTGGGAAAATATC
TCGAGATAGTGGCAAAGGGAAAGACATCAGATGCGTTGTCGAAATTGACAGAGCTTGCAC
CAGAAACAGCGTGCCTTCTTACTTTGGACAAGGACGGAAATGCCATTTCAGAAACAGAGA
TCAGCACTCAATTACTTCAGAGAAATGATGTCATCAAGATTGTGCCTGGCACCAAAGTTC
CTGTTGACGGCGTTGTCATAAAAGGTCAAAGCCATGTCAATGAAAGTATGATAACTGGGG
AAGCAAGGCCTATTGCAAAGAAACCAGGCGACAGGGTTATTGGGGGTACTGTAAATGATA
ACGGTTGCATAATTGTTAAGGCGACTCATGTTGGGTCAGAAACAGCTTTGTCGCAAATAG
TCCAGTTGGTTGAAGCTGCTCAACTTGCAAGAGCTCCAGTGCAGAAGTTAGCAGACAAGA
TTTCACGTTTTTTTGTTCCAACTGTGGTGGTGGCTGCATTTCTTACATGGCTTGGCTGGT
TCATACCTGGGCAACTTCACCTCTACCCCCAGCAATGGATCCCAAAGGCCATGGATAGTT
TTGAGCTTGCTTTGCAGTTTGGAATTTCTGTCCTAGTTGTCGCATGCCCATGTGCTTTGG
GACTTGCTACACCAACTGCTGTTATGGTTGCAACTGGTAAAGGTGCTTCTCAAGGTGTTC
TCATTAAGGGTGGAAATGCACTTGAGAAAGCTCATAAGATTAAGGCTATCATATTTGATA
AAACTGGAACGCTGACAGTTGGTAAACCTTCTGTCGTTCAAACAAAGGTCTTCTCAAAGA
TACCACTTCTAGAACTCTGTGATCTGGCTGCTGGTGCTGAGGCAAACAGCGAGCATCCTC
TATCAAAAGCTATCGTTGAGCACACAAAGAAGCTCAAGGAACAATATGGATCTCACAGTG
ATCACATGATGGAATCTAGGGACTTTGAGGTGCATCCAGGAGCAGGTGTCAGTGCCCATA
TCGAAGGCAGGCTGGTTTTGGTTGGAAACAAAAGGCTGATGCAGGAATTTGAAGTTCCGT
TGAGTCCTGAGGTGGAGGCGTACATGTCCGAAACAGAAGAGCTTGCTAGGACCTGCGTAC
TTGTTGCTATCGATAAGATCATCTGTGGGGCCCTCGCTGTTTCGGATCCTCTGAAGCCTA
AGGCAGGCCAAGTCATTTCTTACCTTAAGTCAATGGGCATCTCCAGTATCATGGTGACCG
GTGATAATTGGGCTACCGCAAAATCAATTGCAAAGGAAGTTGGGATCAGCCAGGTGTTTG
CCGAGATCGACCCAGTGGGAAAAGCTGAAAAGATCAAAGACTTGCAGATGCAAGGGTTGA
CGGTGGCAATGGTTGGCGATGGGGTAAACGACTCCCCAGCATTGGCGGCGGCAGACGTGG
GCATGGCGATCGGTGCTGGCACAGACGTGGCCATCGAGGCTGCTGACATCGTTCTAATGA
AGAGCAACCTTGAGGACGTCATCACCGCCATTGATCTCTCGCGCAAGACCCTCTCCAGGA
TCCGGCTGAACTACGTGTGGGCCCTGGGCTACAACGTCCTGGGCATGCCGATCGCCGCCG
GCGTCCTGTTCCCTTTCACGGGCATCCGGCTGCCCCCTTGGCTCGCCGGGGCATGCATGG
CTGCCTCGTCGGTGAGCGTCGTCTGCTCCTCCCTGCTCCTCCAGCTCTACAAGAAACCGC
TGCACGTTGAAGACGCGCCCAGGCCCAGGGAGGACTCAGATTTGGTGTGACTGCGAGTGA
GGACTGATCCCTCGATCTCGATGTGTACTAACGAGAGCTTGCTGGCGTCACTGATGCTTA
ACGAGCCAACACCTGATCGATCCGTGTACAGCAAGCAACACGTTTTGGAACAGTTCGCCA
ATTGATTGTGCAATAATTCAAGACAAGGTTTATAACTTTATATGATACTAGTACAATGAC
AGCACATAATCATAGATTTTTTTTCGGAAATTACAAGAAAACATTTGCTCTTTTGCCATA
ACATACAA