Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015777_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:118463714:118464650:1 gene:Zm00001d015777 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast small heat shock protein

Sequence

ATGGCTTTAGCTCGTCTGTGCCTCAACAGGGCCATCGCTGGCCGCGCGCAGGCGCTGGCG
AGGCCGGCGCTCGCCGCAGCCCCGGCGACAGATCCGAAACTTCACTCGCTTCTCTCAACC
TCGGCAGCCGACTCTGCCGCCTCAGGCGAGGCAAACCGCCGAGATGTCGCCGTGTCGGAG
CGCTCCGCCCCCAATCGCCGCTGGGCATGGCGAGACCTCCGCGACTTCACCCCGTTCAGC
CTCGTGGACGGTCTCGGGAGCGCGCTGTCGCAGGTGGCGGAGACCCTGGGCCGCCCGCTG
GAGCGCCTGGCGCCGTCGCGGCTGCTGTCCGGGAAGGTGCGCGAGGACGAGGCGCGGTAC
CGGCTGCGTTTCGAGGTGCCGGGCCTCGGCAAGGGCGACGTGCGCGTGGCCGTGGAGGAC
GGGGTGCTGGTCATCGAGGGCGAGAAGCGTGAGCACGGGGAGGAGGGCGACGGCGGCGAG
TGGTGGTCGACCAGCGGGTACCACGCCAGCCTGCTGCTCCCGGACGACGCGCGCGCCGAG
GGGATCACCGCCGAGGTGAAGGACGGCGTGCTGTACGTCACCGTGCCGCGCACCGGGGAG
CGCAAGCGGAACGTCACCGAGGTGAAGGTGCAGTGA

Peptide Sequence

PEP ID

Zm00001d015777_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:118463714:118464650:1 gene:Zm00001d015777 transcript:Zm00001d015777_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast small heat shock protein

Sequence

MALARLCLNRAIAGRAQALARPALAAAPATDPKLHSLLSTSAADSAASGEANRRDVAVSE
RSAPNRRWAWRDLRDFTPFSLVDGLGSALSQVAETLGRPLERLAPSRLLSGKVREDEARY
RLRFEVPGLGKGDVRVAVEDGVLVIEGEKREHGEEGDGGEWWSTSGYHASLLLPDDARAE
GITAEVKDGVLYVTVPRTGERKRNVTEVKVQ

Transcript Sequence

Transcript ID

Zm00001d015777_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:118463714:118464650:1 gene:Zm00001d015777 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloroplast small heat shock protein

Sequence

AAACAGACTAACAGAGTGAGGACACAAGGACGGTGACCAAGCAGAGTGACGACGACGCGA
CAATCAAGTCCGTAGCTCCGGCGGTAGACTTTGATATGGCTTTAGCTCGTCTGTGCCTCA
ACAGGGCCATCGCTGGCCGCGCGCAGGCGCTGGCGAGGCCGGCGCTCGCCGCAGCCCCGG
CGACAGATCCGAAACTTCACTCGCTTCTCTCAACCTCGGCAGCCGACTCTGCCGCCTCAG
GCGAGGCAAACCGCCGAGATGTCGCCGTGTCGGAGCGCTCCGCCCCCAATCGCCGCTGGG
CATGGCGAGACCTCCGCGACTTCACCCCGTTCAGCCTCGTGGACGGTCTCGGGAGCGCGC
TGTCGCAGGTGGCGGAGACCCTGGGCCGCCCGCTGGAGCGCCTGGCGCCGTCGCGGCTGC
TGTCCGGGAAGGTGCGCGAGGACGAGGCGCGGTACCGGCTGCGTTTCGAGGTGCCGGGCC
TCGGCAAGGGCGACGTGCGCGTGGCCGTGGAGGACGGGGTGCTGGTCATCGAGGGCGAGA
AGCGTGAGCACGGGGAGGAGGGCGACGGCGGCGAGTGGTGGTCGACCAGCGGGTACCACG
CCAGCCTGCTGCTCCCGGACGACGCGCGCGCCGAGGGGATCACCGCCGAGGTGAAGGACG
GCGTGCTGTACGTCACCGTGCCGCGCACCGGGGAGCGCAAGCGGAACGTCACCGAGGTGA
AGGTGCAGTGATGCGTGTCGTGTCACTCAACTCTTGTGAGTGCTTCTTGTTTGTGAGCCC
GTGACTGTTGTGTATTTTCTCCGGAAATAAAATACGTATCGTGTACAGAAAGCGAAA