Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015770_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:118194632:118197035:1 gene:Zm00001d015770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCACTGGGCGACGACGCGGAGGCGGCGGACTTCGTGCTGCTAGACGAGCTCCAGGCG GCGCTGCCGCGGGACCCCTACGAGCAGCTGGATCTGGCACGCCGCATCACCGCGCTGGCG GTGTCCGGGCGGGTGTCCGGCCTAGACACTACTCGCGCCACCCCACGCGCTGCCGCCTAC CGCCGCCTCAGCGCCCTGATCCACCGGGGCGACCTAGACGCGGCGCTCCGCCTCGTGGGC TCCTTGCCGCGCCCGCTCGACGTTCCGCTCGCCAACCATCTTGTCCGCGACCTCTGCCGG TGGGGCCGCCCCGCCAACGCCGTGTGCGTCGTCGAGGCGTACGGGCCCGAGGCCACTGCC GCCACCTACGGCGCGCTGGTCGACGGGTACTGCCGCGTGGGTCTGCTCGAGGACGCGCGC CGCGTCGCGTGGGCGGAATGCCCGCGCACGTGCAGGCCAGCAGCGCGTACGCCCACAACC CGCTCATCCACGCGCTCTGCGAGCGCGGGCGGGTCGCGGACGCCCTCATGGTCCTCGACG GCATGCTCTGCCGCGGGCGGCGTGCAAGGGGAGAGGATACCGGCAGGCCCTGAGCTCATC GATTTCATGCGCGCAGAGGGGTGTGAGCCCAACAACGTGACATACAATGTCATCATCGAC GCTATGTGCAGAGAAGGTGATGTAGATCAGGCACGCGAGCTTCTGAACAGCTTGCCTTCT AGAAGTTGCAAGCCCAACACTGTCAACTACAACACTGTTTTGAAGGGTTTCTGTAGCATC GAGCGATGGGTGGATGCTAATGAGATTCTAGACGAGGTGGTTAGCGAGAATTGCCCACCA AATGAAGCAACACTCAATGTGACCATCAATACCTTGTGTCGAAAAGGATTGCTCCAGAAA GTTACTCGATATCTAGAGAAAATGTCAAAGCATGGATGCACGACAAATGTTGTTACATAC AATGCTATAATCGGTGGGTTGTGTGAGCAAGGAAATGTGGATAGTGCCTTGGAGTTACTA AGCAACATGCAATCCTTTGGTTGTAAACCCGATATTGTCACCTACAACACTGTGCTAAAG GGTTTGTGTAGTGCTGATAGGTGGGAGGATGCCGAGGAGCTAATGATTAAGATGTCCCAG AATGATCGCCTCCGAGATAACTCGACATTCAATACTATTATTAGTTTCTGGTGTCAAAAG GGATTGATTTTGCAGGCCTTAGAAGTCTTTAAGCAAATGCCTGAGAAAGGCTGCAATCCT AACTCTACCACTTACAGTACAATAATAGGTGGACTAGTCAAGGCTAGCAAGATGGAACAA GCCCTTGAGTTGTTGAATGAAATGGCCAACAAAGGATTCAACACAGATAAGATGTACCTG GTGTTAACTAAGAGTCTGAATAAAGAGGATAAAATTGAAGAGGTAGTCCAGGTGGTTCAT AAACTGCAAGATTCAGGCATATCACCCCAGACAGTACTCTACAATACAGTACTGTTAGGG CTTTGCAGAAATGGGAAAACAAATTATGCTATTGATGTGCTTGCTGATATGGTGTCCTGT GGTTGTATGCCTGATGAATCGACCTACATTATACTCATAGAAGGATGTGAGCACATTAGA TTGTACACATGGTTTGATGTTTACTTTCTGGATTCACGTTTAGCCAAGGCATCCTCATAT CCAAAATATAAGTCGTTTCAAGCCCGTACTTTGGATCAGTATTCTCTATTTCTGTTTGGA GAAGAAGAACGATTATGA

Peptide Sequence

PEP ID	Zm00001d015770_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:118194632:118197035:1 gene:Zm00001d015770 transcript:Zm00001d015770_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPLGDDAEAADFVLLDELQAALPRDPYEQLDLARRITALAVSGRVSGLDTTRATPRAAAY RRLSALIHRGDLDAALRLVGSLPRPLDVPLANHLVRDLCRWGRPANAVCVVEAYGPEATA ATYGALVDGYCRVGLLEDARRVAWAECPRTCRPAARTPTTRSSTRSASAGGSRTPSWSST ACSAAGGVQGERIPAGPELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPS RSCKPNTVNYNTVLKGFCSIERWVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQK VTRYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLK GLCSADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNP NSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVH KLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGCEHIR LYTWFDVYFLDSRLAKASSYPKYKSFQARTLDQYSLFLFGEEERL

Transcript Sequence

Transcript ID	Zm00001d015770_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:118194632:118197035:1 gene:Zm00001d015770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCACTGGGCGACGACGCGGAGGCGGCGGACTTCGTGCTGCTAGACGAGCTCCAGGCG GCGCTGCCGCGGGACCCCTACGAGCAGCTGGATCTGGCACGCCGCATCACCGCGCTGGCG GTGTCCGGGCGGGTGTCCGGCCTAGACACTACTCGCGCCACCCCACGCGCTGCCGCCTAC CGCCGCCTCAGCGCCCTGATCCACCGGGGCGACCTAGACGCGGCGCTCCGCCTCGTGGGC TCCTTGCCGCGCCCGCTCGACGTTCCGCTCGCCAACCATCTTGTCCGCGACCTCTGCCGG TGGGGCCGCCCCGCCAACGCCGTGTGCGTCGTCGAGGCGTACGGGCCCGAGGCCACTGCC GCCACCTACGGCGCGCTGGTCGACGGGTACTGCCGCGTGGGTCTGCTCGAGGACGCGCGC CGCGTCGCGTGGGCGGAATGCCCGCGCACGTGCAGGCCAGCAGCGCGTACGCCCACAACC CGCTCATCCACGCGCTCTGCGAGCGCGGGCGGGTCGCGGACGCCCTCATGGTCCTCGACG GCATGCTCTGCCGCGGGCGGCGTGCAAGGGGAGAGGATACCGGCAGGCCCTGAGCTCATC GATTTCATGCGCGCAGAGGGGTGTGAGCCCAACAACGTGACATACAATGTCATCATCGAC GCTATGTGCAGAGAAGGTGATGTAGATCAGGCACGCGAGCTTCTGAACAGCTTGCCTTCT AGAAGTTGCAAGCCCAACACTGTCAACTACAACACTGTTTTGAAGGGTTTCTGTAGCATC GAGCGATGGGTGGATGCTAATGAGATTCTAGACGAGGTGGTTAGCGAGAATTGCCCACCA AATGAAGCAACACTCAATGTGACCATCAATACCTTGTGTCGAAAAGGATTGCTCCAGAAA GTTACTCGATATCTAGAGAAAATGTCAAAGCATGGATGCACGACAAATGTTGTTACATAC AATGCTATAATCGGTGGGTTGTGTGAGCAAGGAAATGTGGATAGTGCCTTGGAGTTACTA AGCAACATGCAATCCTTTGGTTGTAAACCCGATATTGTCACCTACAACACTGTGCTAAAG GGTTTGTGTAGTGCTGATAGGTGGGAGGATGCCGAGGAGCTAATGATTAAGATGTCCCAG AATGATCGCCTCCGAGATAACTCGACATTCAATACTATTATTAGTTTCTGGTGTCAAAAG GGATTGATTTTGCAGGCCTTAGAAGTCTTTAAGCAAATGCCTGAGAAAGGCTGCAATCCT AACTCTACCACTTACAGTACAATAATAGGTGGACTAGTCAAGGCTAGCAAGATGGAACAA GCCCTTGAGTTGTTGAATGAAATGGCCAACAAAGGATTCAACACAGATAAGATGTACCTG GTGTTAACTAAGAGTCTGAATAAAGAGGATAAAATTGAAGAGGTAGTCCAGGTGGTTCAT AAACTGCAAGATTCAGGCATATCACCCCAGACAGTACTCTACAATACAGTACTGTTAGGG CTTTGCAGAAATGGGAAAACAAATTATGCTATTGATGTGCTTGCTGATATGGTGTCCTGT GGTTGTATGCCTGATGAATCGACCTACATTATACTCATAGAAGGATGTGAGCACATTAGA TTGTACACATGGTTTGATGTTTACTTTCTGGATTCACGTTTAGCCAAGGCATCCTCATAT CCAAAATATAAGTCGTTTCAAGCCCGTACTTTGGATCAGTATTCTCTATTTCTGTTTGGA GAAGAAGAACGATTATGA