Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015758_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:116966560:116976377:1 gene:Zm00001d015758 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 41
Sequence	ATGGAGCAAGGGGAGAACCAATCAGCTGATAGTTTTGTTGTTTCATCATCGGATAATAAT GAGCTGGAAGATTTACCTGTGAAGGAAAGATGCTTTGAGCAGAGAGAAGCTCTTCCTGGG GAGCCTCGCTGTGTTGTGTGTGGCCGATATGGTGAATATATATGTGATCAGACTGATGAT GACATCTGCAGTGTGGAATGTAAGACAATCCTTCTTTCTCGGATAGTTGCTAAAACAAAG CCAGCAGTAAAAGCAGCAAAGCGTGTGAACCTTCCTTTAGGCGATGAGAGCTTTTGTATT AAGGACATCAATTTTCCAAATATACTTACTTTAGCTGACAGCCGGATCAGTTCACTGAGG AGTAAACTTGACATTTGTGTCAAGGGTGATGCTGTTCCTGATCCAATCATGTGTTTCTCT GCCTGTGGTCTTCCTGAGAAGCTTGTGCACAATCTCGAGACTGCGGGATATTGCATGCCT ACTCCAGTGCAGATGCAAGTCATCCCTGCATCAATGAGTAATAGAAGTTTACTTGTTTCT GCTGATACTGGTTCAGGGAAAACTGCATCTTTTCTAATTCCCATAATTGCTCATTGTTCA CGATTAAGATCACAAGAATGCACAGGCAATCAAGGACCGTTGGCTATAGTTCTTGCTCCA ACAAGAGAGCTATGCCTGCAGGTAGAAGAGCAAGCAAAGGTGCTTGGTAAAGGTTTGCCT TTCAAAACTGCTCTAATTGTCGGCGGAGATCCATTGCCTCAACAAATTTACAGAATTGAA AATGGTGTTGAGTTAATTGTTGGCACCCCTGGGAGGCTAATTGATCTTCTCATGAAACAC AATGTTGACCTTACCTATGTTTCTGTATTCGTTTTGGATGAGGTGGACTGCCTGCTGGAG AGGGGATTCAGGGATCAGGCCATGCAGATTTTTCAGTCACTTTCACACCCACAGGTTATG ATGTTTTCAGCAACAATACATTCAGAAGTTGAGAAGATGTCTAACTCACTGGCTAATAAT GTGATAAGTATCTCTTGTGGGAACCCAAACAGACCAAACAAATTAGTTAAACAAGTAGTC ATTTGGGTGGAGTCTAAGAAGAAGAAGCAGAAGATTTTTGAGATAATGAAAAGCAAGCAA CATTTTAAACCTCCTGCTGTTGTGTTTGTGAGTTCCAGGGTTGGAGCTGATCTGTTGTCT GAAGCAATTACTGTTGCTACTGGATTAGAGGTTGTTTCTATCCATGGTGAGAAAACGATG ATTGAGAGAAGAGAGAATTTGCGAAGGTTTTTAACAGGAGAAGTATCTGTCGTTGTTTCT ACTGGCGTCCTGGGGCGTGGAATGGATCTTCTGAAAGTACGTCAAGTGATATTGTTTGAT TTACCAAATTCCATTGATGAATATATTCACCAAGTTGGAAGGGCATCCCGGATGGGTGAG GAGGGTATGGCTGTTGTGTTTGTGAATGAGGAGGATAGAAGGATTTTCAAAGAGCTTGTT CAGGTTCTGAAGACTGCAGGAGCACCGATACCCCGTGAAATTGCAAATTCAAGATACACA GCTGGTGTTTATGTTGGTAGCGAGAGGAAGAGAAAGTTGAGCTCTAGGGTTTGGGAGAAT TAA

Peptide Sequence

PEP ID	Zm00001d015758_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:116966560:116976377:1 gene:Zm00001d015758 transcript:Zm00001d015758_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 41
Sequence	MEQGENQSADSFVVSSSDNNELEDLPVKERCFEQREALPGEPRCVVCGRYGEYICDQTDD DICSVECKTILLSRIVAKTKPAVKAAKRVNLPLGDESFCIKDINFPNILTLADSRISSLR SKLDICVKGDAVPDPIMCFSACGLPEKLVHNLETAGYCMPTPVQMQVIPASMSNRSLLVS ADTGSGKTASFLIPIIAHCSRLRSQECTGNQGPLAIVLAPTRELCLQVEEQAKVLGKGLP FKTALIVGGDPLPQQIYRIENGVELIVGTPGRLIDLLMKHNVDLTYVSVFVLDEVDCLLE RGFRDQAMQIFQSLSHPQVMMFSATIHSEVEKMSNSLANNVISISCGNPNRPNKLVKQVV IWVESKKKKQKIFEIMKSKQHFKPPAVVFVSSRVGADLLSEAITVATGLEVVSIHGEKTM IERRENLRRFLTGEVSVVVSTGVLGRGMDLLKVRQVILFDLPNSIDEYIHQVGRASRMGE EGMAVVFVNEEDRRIFKELVQVLKTAGAPIPREIANSRYTAGVYVGSERKRKLSSRVWEN

Transcript Sequence

Transcript ID	Zm00001d015758_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:116966560:116976377:1 gene:Zm00001d015758 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 41
Sequence	GCAGCCGACAGGCAAACGCCTCGGGAATCAGCTGTGCCCCGCGCCTCGTGGGCCACCAGG AGCTGTTGCTGCCCCCGGTGTCTCCGCCCTCAACTTCCAAACCCTAGGGGCGGTAGAGGC TCCAAACTCGGGCGCTTTGGCCGTGACCGTCCGAGGTGGGCGTCATTGCGAGTTGGTGAC CCACGGGTTGCGGTTGACTAGTGCCTTTTCTTTTCTTCCTGGACTGAATGGAGCAAGGGG AGAACCAATCAGCTGATAGTTTTGTTGTTTCATCATCGGATAATAATGAGCTGGAAGATT TACCTGTGAAGGAAAGATGCTTTGAGCAGAGAGAAGCTCTTCCTGGGGAGCCTCGCTGTG TTGTGTGTGGCCGATATGGTGAATATATATGTGATCAGACTGATGATGACATCTGCAGTG TGGAATGTAAGACAATCCTTCTTTCTCGGATAGTTGCTAAAACAAAGCCAGCAGTAAAAG CAGCAAAGCGTGTGAACCTTCCTTTAGGCGATGAGAGCTTTTGTATTAAGGACATCAATT TTCCAAATATACTTACTTTAGCTGACAGCCGGATCAGTTCACTGAGGAGTAAACTTGACA TTTGTGTCAAGGGTGATGCTGTTCCTGATCCAATCATGTGTTTCTCTGCCTGTGGTCTTC CTGAGAAGCTTGTGCACAATCTCGAGACTGCGGGATATTGCATGCCTACTCCAGTGCAGA TGCAAGTCATCCCTGCATCAATGAGTAATAGAAGTTTACTTGTTTCTGCTGATACTGGTT CAGGGAAAACTGCATCTTTTCTAATTCCCATAATTGCTCATTGTTCACGATTAAGATCAC AAGAATGCACAGGCAATCAAGGACCGTTGGCTATAGTTCTTGCTCCAACAAGAGAGCTAT GCCTGCAGGTAGAAGAGCAAGCAAAGGTGCTTGGTAAAGGTTTGCCTTTCAAAACTGCTC TAATTGTCGGCGGAGATCCATTGCCTCAACAAATTTACAGAATTGAAAATGGTGTTGAGT TAATTGTTGGCACCCCTGGGAGGCTAATTGATCTTCTCATGAAACACAATGTTGACCTTA CCTATGTTTCTGTATTCGTTTTGGATGAGGTGGACTGCCTGCTGGAGAGGGGATTCAGGG ATCAGGCCATGCAGATTTTTCAGTCACTTTCACACCCACAGGTTATGATGTTTTCAGCAA CAATACATTCAGAAGTTGAGAAGATGTCTAACTCACTGGCTAATAATGTGATAAGTATCT CTTGTGGGAACCCAAACAGACCAAACAAATTAGTTAAACAAGTAGTCATTTGGGTGGAGT CTAAGAAGAAGAAGCAGAAGATTTTTGAGATAATGAAAAGCAAGCAACATTTTAAACCTC CTGCTGTTGTGTTTGTGAGTTCCAGGGTTGGAGCTGATCTGTTGTCTGAAGCAATTACTG TTGCTACTGGATTAGAGGTTGTTTCTATCCATGGTGAGAAAACGATGATTGAGAGAAGAG AGAATTTGCGAAGGTTTTTAACAGGAGAAGTATCTGTCGTTGTTTCTACTGGCGTCCTGG GGCGTGGAATGGATCTTCTGAAAGTACGTCAAGTGATATTGTTTGATTTACCAAATTCCA TTGATGAATATATTCACCAAGTTGGAAGGGCATCCCGGATGGGTGAGGAGGGTATGGCTG TTGTGTTTGTGAATGAGGAGGATAGAAGGATTTTCAAAGAGCTTGTTCAGGTTCTGAAGA CTGCAGGAGCACCGATACCCCGTGAAATTGCAAATTCAAGATACACAGCTGGTGTTTATG TTGGTAGCGAGAGGAAGAGAAAGTTGAGCTCTAGGGTTTGGGAGAATTAACGTGTTTTTG GAAAGGTTACTAGCAATAGTTTTGAGTGCAAAAAGAAGATTCAGTGGAATAACAAATTAG CAGGGGTTTGCACTGTCATGTTTGCATGCCAGCTAAGATACAAGTTGTTACTTGTTAGGG GTAGCTCAATGCCAAGAATTGCTGATCATGAGTTTACTACTACTGTGGTGGATGAATCAC CACTATGCAAGTTATTTTCACTAATGTATCTGATTGGATGGCTGCCTTTTCGGTCATAAT GGCATGTGATGGGCACATGAAGGCCTCAATTTTGATGATGAAGCGACCTTGGTCATCTCC GTTTGAGGGTGAAGCTGGGCTGCTGCTGCTCAGCAACTCTTCGATCATTTGCAGTGCGAT CCTCTCCTCCTCATCCATCGGCGTGGCTGGTGGAGCAGTTGTTGCTGATGTGGACTGTGA TGCAGCATCAGTGGATGCTGCATCTTTGTTGAGCTCCACTGTCATGACCCAGTTGGAGTC AGCACGGGCTCCTGCACGCTTCTGCCAAACACCAATGTGGGACTTCTCAGGGTCAAGGCG GAGACAGGTCAGGGACGGTGATGGCGCCTTGCAGCATTTGCGGAGCTTCGCACTGAGAAT CTGGGACAGGTTGGTGGTAGAGGAGCCGCTGCTGAAGTTGCTGCGGGCGTCCCTTCCCGC AGCTGGGGTAGGCTCCCCTGTGCTGCTTCTTTGGATTGGGAAGTTGGTCTTGGCGTTGCG TCCGCTCATCAGCACAGCAGCCTCATCATATGCTCTCGCTGCCTCCTCAGCCGTCTCAAA GAGCTACTGGGGCCAATCATATTGTTGAGTATCACTGGAAGCGTGGACACTGCGGCAAAG CATATAGGTAAGACTTGTGCTGAAACTTAGGGTGTTGGAATATTTACTGCATATTTTTGA GATAACGTCAAAATTCTTTTGCTTCATTTGGAATCTCTAGTCGTGTTCCGTCACCCAATT TTTTCTCTATAAATATGTAATGGGATGTTGAAATTTACAGTGAATTGTTCTTGAACTGAA TATAGATTGTGTGTTTAGAGTGATTTCAGTGCGACCTGTGTATGAGAATTGACAAGGGTG CCTTTGTCCTGGGGTGTTAGTTCTGGAATTGCTTGGAGATGGTTGGCATTTAAGCTTGTC TGAGGTAGCTGCAGGTACAGACTGGTGATGATGATGGTGTGTGCTCAGTTGATGGATACT TGTTCAATGAAGAAATATAAAAGTTTTTTTTTTCTGTCACTTATAATATGGGAGTAGACT GAACTGTTGTTCAGTGGAGAATTTGATAGTATGTTTACATTTTGGCTTCGCTATATTCTC ACAATAGAAATCAGGTTGCAAAATGGTTATGAAGTTAGGCTATAATAATCTGTCTACACG TAACTTCATTTCTTCTCCATTGAACATCTCGTGTGCTTCGGTTTGTAGAAAATTTCATTT CATTTCACTTGAACTTGGCTTTCTTTCGTTAACCTCTGAAACTATCCACAAGACGGTAGC TCTAAAGGTTTATGGTAGTCTGCTTCAGCAATAAGCTTACTCTTGTCTTAGGATGACAAA TGTTTATAGTAAGATCAGATCCTTCGCTGTATCCAAACATTCTAATAATTTTGGGTTCTT TGAAAGGGAGCTGGAGTCTTTGCTGAAAATGTTTGGTTGCAGATTACGACTTTGCACACT TAAATGTTGTGTTCCCTCTCCCACAACTTTCCCGTTTGGGTGCTTTCCAGAAAAAAAAAC TGTTGCCATTTTGTTTGGAAGTATCAGTTTGCACGCATTGTTTGGATGTGAAGTATCTTA ATGGTTTTGACTGGGGTTTTTCAGCAAGTCACACCTTGGAATATCTTTCACAGCCGTGCT TTTTTAGAAAGGGAGAAAAAGAAAAAAAAAATCAGTTACGGGTGAGCTCGTGGTCATGCC GTGCGCTCGTATTTCTAAGCCGAGCCATTTGCATGAATGAGGTGCTAGGCTTTCCTGTGA TACCAAAATGAAGCGTCGGTCTGCAATAAATCGGTAAGCTGTGGGTCATATTTTTACCAG GCGAGCAACTGCCCCCGTTGCTACAGAAGTTAAGCTGTGTAAAATAAAAAGGTGAAATAA ATTGATTGAGTCTGTTGCCCTTGTCGAGTTAATTAATGAGAAACAGGTACCTGCAGTACA TCTACGGTGGGGATGTCATGTGTCAGTCGATCACCTCTGACTGGAGCATAAGAAGGTTCT GTGAGATCTTGTCCTCTGACACTGTCTGGTACGTACACCCTTTTCTCACGCATTGTGCAC AGGTGTATCTTTAAAAATTGCCGGTGGAGTCAAAAGAAAATAGGAGCATGCAGTGCACTG TATTTTATTTGGATTTGAAGCCCCTGCATGTTTGGCAGCAGTTATCTGTTCCTCAGCTCC TGTAACCTGAGGCGCATCTCGGAGTCCGAATTATTATTTTTAATCATCACCTACGTTAGA AATGAATCTGTTTGATGTTGCCTAGGCGCAGTGGACAGAGAGGTAAGGTTCTTTTTGGGA CCATATATATGACTAAGCTGGTCTCCCCAAATCATTCCCGGCAAAATCATGGACCTTAGC GAGGAACCGGAAGCTGCTTGGTTTTCTTTCTTTCTTTCTTTTATGTATATGTTTGTATTC TGTATAGATTATTAATCCGCTCAAAGCGGCAAACCGACATGCATGGTATAGTAAAATATG AATATACTAGTACTATAGAT