Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015741_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:115207560:115209367:-1 gene:Zm00001d015741 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

ATGTCCGCAATAGCACTGGGCGCCGCCGGCACCTGGCCGGAGGCCGTGATCCAGTGCCTC
CTCTTCCTCCTCGCCGCTGGCATGCTCCTCGCGCTTCACTCCCTCCCCCGCCGCGCCGCC
CTTCGGCTGCGCCGCTCCGGCGCCGCCGGCGGCTCCTACGCGGCCCAGTCGCGCCGGCAC
TTCGCTCAGGGTGCCCAGCTTCTCGCCCGCGCGCGCGCTACGGCCCCTAAGCCCCCGGGC
CCGCTCGCCCGCGCGGCCGTCGCCGAGGCTGACCGCGCCATCGCTCTCGACCCCCGCGAC
GCCGCCCCGCTCATCCTCAAGGCCCTCGCCCTCGACCTCCAGGGCCACCGCCTCCCTGCG
CTGCGCGCCCTCGACGGCGCCCTCGCGCCGCCGCTCGCCCGCTCACTCGAGCCGCGCGAG
CGAGGGGACGCGTTGGCCAAGCGCGCCGAGATCGCGCTCGCACTCCACCGCCGCCGCCGC
CTCGACCAGGCCGCTGTCGATCTCGCGGAGGCCGTCCGCCTGAGTCCCGAGAATGCCCGC
GCCCATGCCCTTCTGGGCGAGTGCTACGAGAAGAAGGGGCTCGCCGCTGAAGCTCGGGAA
GCCTTCAAGACCGCTGCATCCATCGATCCAAAGCTTGGTGTTGCGCTTGACGGGCTCCGT
CGGTTAGACGGAGGCAACGAAGGAGACGAAAATGACTGA

Peptide Sequence

PEP ID

Zm00001d015741_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:115207560:115209367:-1 gene:Zm00001d015741 transcript:Zm00001d015741_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

MSAIALGAAGTWPEAVIQCLLFLLAAGMLLALHSLPRRAALRLRRSGAAGGSYAAQSRRH
FAQGAQLLARARATAPKPPGPLARAAVAEADRAIALDPRDAAPLILKALALDLQGHRLPA
LRALDGALAPPLARSLEPRERGDALAKRAEIALALHRRRRLDQAAVDLAEAVRLSPENAR
AHALLGECYEKKGLAAEAREAFKTAASIDPKLGVALDGLRRLDGGNEGDEND

Transcript Sequence

Transcript ID

Zm00001d015741_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:115207560:115209367:-1 gene:Zm00001d015741 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR domain containing protein

Sequence

ACGACCAGTCCATCCAAGCCGCACCAAGACCGAGCCATGTCCGCAATAGCACTGGGCGCC
GCCGGCACCTGGCCGGAGGCCGTGATCCAGTGCCTCCTCTTCCTCCTCGCCGCTGGCATG
CTCCTCGCGCTTCACTCCCTCCCCCGCCGCGCCGCCCTTCGGCTGCGCCGCTCCGGCGCC
GCCGGCGGCTCCTACGCGGCCCAGTCGCGCCGGCACTTCGCTCAGGGTGCCCAGCTTCTC
GCCCGCGCGCGCGCTACGGCCCCTAAGCCCCCGGGCCCGCTCGCCCGCGCGGCCGTCGCC
GAGGCTGACCGCGCCATCGCTCTCGACCCCCGCGACGCCGCCCCGCTCATCCTCAAGGCC
CTCGCCCTCGACCTCCAGGGCCACCGCCTCCCTGCGCTGCGCGCCCTCGACGGCGCCCTC
GCGCCGCCGCTCGCCCGCTCACTCGAGCCGCGCGAGCGAGGGGACGCGTTGGCCAAGCGC
GCCGAGATCGCGCTCGCACTCCACCGCCGCCGCCGCCTCGACCAGGCCGCTGTCGATCTC
GCGGAGGCCGTCCGCCTGAGTCCCGAGAATGCCCGCGCCCATGCCCTTCTGGGCGAGTGC
TACGAGAAGAAGGGGCTCGCCGCTGAAGCTCGGGAAGCCTTCAAGACCGCTGCATCCATC
GATCCAAAGCTTGGTGTTGCGCTTGACGGGCTCCGTCGGTTAGACGGAGGCAACGAAGGA
GACGAAAATGACTGAGAACCTGTTGCTGATGAGCATTTTACATCTGTTGTATATTTGTGG
CCGAATGCAGTCATGCACTACCTTCTGGTTCAAATTGGTAAAAGTGGTTTGTTATGTGGT
CTTTCTGTAATTGCTTAACTTAAAGATGCCACTAAACATGGTTTACTGTTGTAGATTACC
ACATTTTCAATCGAGCAATAGTATGACTTCGTTGTTAACTTTGTTGGTATTCAGCTCAA