Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015665_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:5:104213184:104220553:-1 gene:Zm00001d015665 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	ATGATGGATCGGACGGCGCAGACAGAGTCGAGATCCGCAGCTTCCCCCGCGCTTCCTCAC GGGTTCACGCGCCGGAGCGGATCGGCAGTTCAGGAGAGCGCTCTGAGTCTGAGGACGTAC AGGATGGTGGAGGCGCCAGCGCCGTCGGATCTGAGCGCGGCGGCGCAGGTGAGCGCGCTG TCGCTGCAGGTGGATCTCCTGCAGCTGCCGCCGGAGGTGCCCGCGCCGGGGGCGCCCGCG CTGCGCGGCGTCCTCGACCACCTCTTCGCGCACTGGCTCTCTCTCCCCGAAACTGCCGCG CTTCTCGCCAGCCTCGTGCACAAGGCCAAGGCTAGCGGCGCCGCGGCGGCGGGGGCCTCG ATGCTGCCCTCCATGATGCTGCAGGGGGGAGCCGCCGTGCCGCCGCTCTCTCCGAGGTCC CCGCGCCTCTCGCGGAGGCCCAGCAGCCTAGGCTCCGGCCCGCCCCACCGCTCCGCGTCG CCGCTCCGCCCGCCAGCCGCGCGCTCCGCCAAGGAGGTCATACCGCAGTTTTATTTTCAA GATGGACGGCCACCGCCGTACGAGGTGAGGAAGCAATGCATATCAACCGTTGATCAGCTC TTCGCCGGCCACTCAAATGGTCTTCGGGCTCCAGAATTTCGGATGGTTACCAGGGAACTC TGCAAACTACCGACATTCTTTACTACTGTTCTCTTCGACAAGATAGACAAGGAGGGCACT GGATTCGTGACAAGGGAGGCCTTCATTGTTTTCTGGGTGAATAGCAATTTGATGAGTATG GATAGTGCAACCCAAGAGGATTTCAAACCGATTCTGAAAGACCTTTTGGACAATCATCCT GGTTTGGAGTTCTTAAAGAGCACACCTGAATTTCAGGAAAGATATGCTGAGACTGTCGTG TATAGAATATTCTATTGCTTGAATCGAATTGGAAGTGGACAGCTAACACTTAGGGAGCTG AAGCATGGAAATCTACTCAGTGCACTCAGGCATGCTGATGATGAAGAAGATATCAATAAA GTTTTAAGGTATTTCTCATATGAGCATTTCTATGTGATATATTGCAAGTTCTGGGAGCTG GACACCGATCATGACTTCTTTATTGACAAAGAAAATCTTATTAAGTATGGAAATCATGCA TTGACATATAGGATTGTAGATAGAATTTTTTCAGAGGTTCCTAGGAAATTTACAAGCAAG GTTGAAGGGAAAATGGGCTACGAAGATTTTGTCCATTTTATATTGTCTGAAGAGGATAAA TCATCAGCGCCAAGCCAAGAATATTGGTTCAAATGTATAGATTTGGACGGCAATGGCATA CTTACACATATTGAACTACAGTTCTTCTTTGAGGAGCAACTTCATCGCATGGAGTGCATG GCCCAGGAACCTGTTCTATTTGAGGACATCTTGTGTCAGCTCATTGATATGATTGGACCT GAGAATGATAGCTATTTGACATTGAAAGACTTCCGAAGGTGCAAACTGTCTGGACATTTC TTTAACATTCTTTTTAATCTGAACAAATTTATGGCATTTGAAGCTAGGGATCCATTTCTC ATCCGTCAAATGCGTGAAGAGCCATCATTAACAGACTGGGATCGTTTTGCACGAAGAGAG TATGTAAGATTGGCGATGGAAGAAGATGGTGAAGATGCTTCCAATGCTAGTGGAGATGTT TGGGATGAGTCACTTGAATCTCCTTTCTAG

Peptide Sequence

PEP ID	Zm00001d015665_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:5:104213184:104220553:-1 gene:Zm00001d015665 transcript:Zm00001d015665_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	MMDRTAQTESRSAASPALPHGFTRRSGSAVQESALSLRTYRMVEAPAPSDLSAAAQVSAL SLQVDLLQLPPEVPAPGAPALRGVLDHLFAHWLSLPETAALLASLVHKAKASGAAAAGAS MLPSMMLQGGAAVPPLSPRSPRLSRRPSSLGSGPPHRSASPLRPPAARSAKEVIPQFYFQ DGRPPPYEVRKQCISTVDQLFAGHSNGLRAPEFRMVTRELCKLPTFFTTVLFDKIDKEGT GFVTREAFIVFWVNSNLMSMDSATQEDFKPILKDLLDNHPGLEFLKSTPEFQERYAETVV YRIFYCLNRIGSGQLTLRELKHGNLLSALRHADDEEDINKVLRYFSYEHFYVIYCKFWEL DTDHDFFIDKENLIKYGNHALTYRIVDRIFSEVPRKFTSKVEGKMGYEDFVHFILSEEDK SSAPSQEYWFKCIDLDGNGILTHIELQFFFEEQLHRMECMAQEPVLFEDILCQLIDMIGP ENDSYLTLKDFRRCKLSGHFFNILFNLNKFMAFEARDPFLIRQMREEPSLTDWDRFARRE YVRLAMEEDGEDASNASGDVWDESLESPF

Transcript Sequence

Transcript ID	Zm00001d015665_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:104213184:104220553:-1 gene:Zm00001d015665 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A regulatory subunit B''alpha
Sequence	GAACACACTAACTCTATTTATAGTTAGTTTTCTCCTTCGTTGTTGCTTCTTTATTTGTCC CTGCTTTTTCAAGGCTAAGTGGTCCTTTAAGCCTCTTTTCTCAATCACATTTGTTCTTAC ATCCCGATTTTCATATGGTATGTATCTCATCAATTGATTGGATTTTCGCATTGAGATATG CATCAAGATCAAAAATCCTATATACATTTGCAATTGATTTTCATATGGTATGTATCTTTT TCCTTTCCATTCCTACATGCTTCCTGGTTTGGTTCATGAAAACACAGAATGGATTGTCAC TTTTCCGTTTGCTACAACCCAAAGTAAAACACATTAAAAAATCACTGTATGCTATGCATT TGCAATGTCAAAGTACTCAGCAACATTGTCTATAAATCATACATTCATAGTTTTTTTAGA GTGAATGTAAATGTAGAGTTTTGGTAGAATATTCAAAGGTGACAGATCTATATTAGTTAT ATGAACAGATAAAATATGGGTTTGGAATATATTTTTTGTATAGTGGAAAATCGAAATGAA AGATGCAAAGATCGGTGATGGTAAACTAATGCATGGCATCATGCTGTTCTGTGTGGTTGT GGAAGTCCCCGTCCATTGCGCTTGCGCGCTACACCGTTGACCCGCGCTACGCGTGTTGCT TGCCACGCAGGCTATGATGGATCGGACGGCGCAGACAGAGTCGAGATCCGCAGCTTCCCC CGCGCTTCCTCACGGGTTCACGCGCCGGAGCGGATCGGCAGTTCAGGAGAGCGCTCTGAG TCTGAGGACGTACAGGATGGTGGAGGCGCCAGCGCCGTCGGATCTGAGCGCGGCGGCGCA GGTGAGCGCGCTGTCGCTGCAGGTGGATCTCCTGCAGCTGCCGCCGGAGGTGCCCGCGCC GGGGGCGCCCGCGCTGCGCGGCGTCCTCGACCACCTCTTCGCGCACTGGCTCTCTCTCCC CGAAACTGCCGCGCTTCTCGCCAGCCTCGTGCACAAGGCCAAGGCTAGCGGCGCCGCGGC GGCGGGGGCCTCGATGCTGCCCTCCATGATGCTGCAGGGGGGAGCCGCCGTGCCGCCGCT CTCTCCGAGGTCCCCGCGCCTCTCGCGGAGGCCCAGCAGCCTAGGCTCCGGCCCGCCCCA CCGCTCCGCGTCGCCGCTCCGCCCGCCAGCCGCGCGCTCCGCCAAGGAGGTCATACCGCA GTTTTATTTTCAAGATGGACGGCCACCGCCGTACGAGGTGAGGAAGCAATGCATATCAAC CGTTGATCAGCTCTTCGCCGGCCACTCAAATGGTCTTCGGGCTCCAGAATTTCGGATGGT TACCAGGGAACTCTGCAAACTACCGACATTCTTTACTACTGTTCTCTTCGACAAGATAGA CAAGGAGGGCACTGGATTCGTGACAAGGGAGGCCTTCATTGTTTTCTGGGTGAATAGCAA TTTGATGAGTATGGATAGTGCAACCCAAGAGGATTTCAAACCGATTCTGAAAGACCTTTT GGACAATCATCCTGGTTTGGAGTTCTTAAAGAGCACACCTGAATTTCAGGAAAGATATGC TGAGACTGTCGTGTATAGAATATTCTATTGCTTGAATCGAATTGGAAGTGGACAGCTAAC ACTTAGGGAGCTGAAGCATGGAAATCTACTCAGTGCACTCAGGCATGCTGATGATGAAGA AGATATCAATAAAGTTTTAAGGTATTTCTCATATGAGCATTTCTATGTGATATATTGCAA GTTCTGGGAGCTGGACACCGATCATGACTTCTTTATTGACAAAGAAAATCTTATTAAGTA TGGAAATCATGCATTGACATATAGGATTGTAGATAGAATTTTTTCAGAGGTTCCTAGGAA ATTTACAAGCAAGGTTGAAGGGAAAATGGGCTACGAAGATTTTGTCCATTTTATATTGTC TGAAGAGGATAAATCATCAGCGCCAAGCCAAGAATATTGGTTCAAATGTATAGATTTGGA CGGCAATGGCATACTTACACATATTGAACTACAGTTCTTCTTTGAGGAGCAACTTCATCG CATGGAGTGCATGGCCCAGGAACCTGTTCTATTTGAGGACATCTTGTGTCAGCTCATTGA TATGATTGGACCTGAGAATGATAGCTATTTGACATTGAAAGACTTCCGAAGGTGCAAACT GTCTGGACATTTCTTTAACATTCTTTTTAATCTGAACAAATTTATGGCATTTGAAGCTAG GGATCCATTTCTCATCCGTCAAATGCGTGAAGAGCCATCATTAACAGACTGGGATCGTTT TGCACGAAGAGAGTATGTAAGATTGGCGATGGAAGAAGATGGTGAAGATGCTTCCAATGC TAGTGGAGATGTTTGGGATGAGTCACTTGAATCTCCTTTCTAGATTGAAAAATACACTGG GAAGACATACCAGATATTCACATGCAGCCCTAATAATCAAGTCAAAGTCATGAACAGTTA TTTGATATATTATCTTTACAGAAACTATAGTTGAGGCAGCTGCATGCTTGCTGGCACCAT CCAAATTTTGACCGGAAGCAAATCCATTTTGTTCTTGGTGACAGTGAGAAGTTTTGCCAC TTGATCCATGATATGATCCAGTTTTGCTGCTAAACTACAACAGATTGATTCATGGCAGCA ACAAGAGAACAGCATCTTGTGATTATTCCGAAGGCACATCCAAAGCCTAGTGACAACAGA TGCAATCATCATATGATGGATAGTGAATAGTTGGCGTCATAATTTTAATTTTCATAGTGT CTCGATTAGGTGTGTCAAAATTTTCTTTCTTTGTTGTACTTTATTTAGCT