Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015571_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:5:98866479:98875915:1 gene:Zm00001d015571 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin system component Cue protein
Sequence

ATGTCTGCTGTAGTGTGCGGCAAGAGGTCCTCCTCCATCTTCGGCGACGAGCTTGTACCT
TCCCCTTCCTCCCCTCCGTCCCCTTCCCACCACCATCACCCCGCCAAGAGGGCCCGCTGC
TCCCCGTCCCGCTGGAGGGAGGGTCTACTCCACCACCTCCTCACCCTCTTCCCCGACATG
GATCCCCAGTTACTTGAAAAAGCTCTTGAGGCCTCTGGAGATGACTTGGACTCTGCAATA
AAGAGATTAAACGAGCTGCGACTGGAGTCAGCTGGGGCTATCCTATCTGCCACTGTTTGT
GAATCTGAGAAGGACATATCATCAGCTCATAACTTATTGGCTGAAGGTACCACCAGTAAT
GGCCATTTAGACATAGCTACTGAAAATCCACCTGCAATTGATAACTCTCAGACAAGTCAT
CATAGCTCTGAATGGGTTGACCTATTTGTCAAAGAGATGATGAGCTCCTCTGACATAGAT
GATGCGCGAGCTCGTGCATCCAGGGCTTTGGAGGTGTTTGAAAAGTCCATCATGGATCGA
GTTGGACCTGAAGCAGTGCAGAATTTGCATAGGGAAAATGTGATGCTAAAGGAGCAACTT
GCAATAATTCTCCGAGAGAATGCTGTTCTGAAGCGGGGCGTTGCGATACAACACGAACGC
CAAAAAGAGTTTGATGTGAGGACTCAGGAAGTCGACAGCCTTAAACAGTTGGTACTGCAA
TATCAGGAGCAGATAAAAACTCTTGAGATAAATAATTACGCACTTAGAGTGCATTTGAAG
CAGGCTCAGCAGGGCAATTCTATGCATGGACGTTTCCCGCCTGACGTCTTCTAA

Peptide Sequence

PEP ID

Zm00001d015571_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:5:98866479:98875915:1 gene:Zm00001d015571 transcript:Zm00001d015571_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin system component Cue protein
Sequence

MSAVVCGKRSSSIFGDELVPSPSSPPSPSHHHHPAKRARCSPSRWREGLLHHLLTLFPDM
DPQLLEKALEASGDDLDSAIKRLNELRLESAGAILSATVCESEKDISSAHNLLAEGTTSN
GHLDIATENPPAIDNSQTSHHSSEWVDLFVKEMMSSSDIDDARARASRALEVFEKSIMDR
VGPEAVQNLHRENVMLKEQLAIILRENAVLKRGVAIQHERQKEFDVRTQEVDSLKQLVLQ
YQEQIKTLEINNYALRVHLKQAQQGNSMHGRFPPDVF

Transcript Sequence

Transcript ID

Zm00001d015571_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:98866479:98875915:1 gene:Zm00001d015571 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin system component Cue protein
Sequence

AAGACAAATCCAACCAACCAAGCTATTCCCCATCTCCGGACCAGCGCCGCCTCCAGTCGC
TGTCCACGGGCACCCCGGGCGCGCCTCCTCCGAGCCCAGACTCGAGGCGTCGGTCGGAGC
GGGGGCCACCATGTCTGCTGTAGTGTGCGGCAAGAGGTCCTCCTCCATCTTCGGCGACGA
GCTTGTACCTTCCCCTTCCTCCCCTCCGTCCCCTTCCCACCACCATCACCCCGCCAAGAG
GGCCCGCTGCTCCCCGTCCCGCTGGAGGGAGGGTCTACTCCACCACCTCCTCACCCTCTT
CCCCGACATGGATCCCCAGTTACTTGAAAAAGCTCTTGAGGCCTCTGGAGATGACTTGGA
CTCTGCAATAAAGAGATTAAACGAGCTGCGACTGGAGTCAGCTGGGGCTATCCTATCTGC
CACTGTTTGTGAATCTGAGAAGGACATATCATCAGCTCATAACTTATTGGCTGAAGGTAC
CACCAGTAATGGCCATTTAGACATAGCTACTGAAAATCCACCTGCAATTGATAACTCTCA
GACAAGTCATCATAGCTCTGAATGGGTTGACCTATTTGTCAAAGAGATGATGAGCTCCTC
TGACATAGATGATGCGCGAGCTCGTGCATCCAGGGCTTTGGAGGTGTTTGAAAAGTCCAT
CATGGATCGAGTTGGACCTGAAGCAGTGCAGAATTTGCATAGGGAAAATGTGATGCTAAA
GGAGCAACTTGCAATAATTCTCCGAGAGAATGCTGTTCTGAAGCGGGGCGTTGCGATACA
ACACGAACGCCAAAAAGAGTTTGATGTGAGGACTCAGGAAGTCGACAGCCTTAAACAGTT
GGTACTGCAATATCAGGAGCAGATAAAAACTCTTGAGATAAATAATTACGCACTTAGAGT
GCATTTGAAGCAGGCTCAGCAGGGCAATTCTATGCATGGACGTTTCCCGCCTGACGTCTT
CTAATGTCTGCCATGGCTCAACAGAATAATTATGCATGGACGTTCGTTAATATTTGATGC
TGTACAGTTGGATTTTGAACTAAGCAGTGTCAAATAAAAAAAATCGAGGTAGTACCTATT
AAGATAAGTAGACTCAGGACCTCAAGTTCGACTCAAATGCTGCATATACGATCGTACCCC
ATCATTGGAGTCGACAACACTAAGGTCCAACTACCTGGAAGCTGAGATGAAATAGCATGT
TAGGGTTGGCAGTGCACTGGTCCTTGCATACTTGTTGTAATAATGGATCTTGCAGGGGAA
GCTCGGATGAAGTAATATTGGCTGTATGCGTTTGAAGTGTGAGAACTGATATATATCGTA
AGCTTAACAC