Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015570_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:5:98829326:98835448:1 gene:Zm00001d015570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sucrose-phosphate synthase 1
Sequence

ATGCAGTTCGAGAAAGAAGAAGCTTGTCGTATGTCAAAACGCCAGCCAGAAACTGAGAAA
ACACGAGCTGATGCTACTGCAGATATGTCTGAAGATCTCTTTGAAGGAGAAAAAGGAGAA
GATGCTGGTGATCCATCTGTCGCATACGGGGACAGCACCACGGGGAGCTCACCTAAAACA
AGTTCAATTGACAAGCTATACATAGTATTGATCAGTCTACATGGTCTGGTCCGTGGTGAG
AATATGGAGCTTGGCCGAGATTCAGATACGGGTGGCCAGATCAAATATGTGGTTGAACTT
GCTAAAGCATTAAGTTCATCCCCAGGAGTTTACCGGGTTGACCTGCTAACAAGACAAATC
TTAGCACCAAATTTTGATCGTAGTTATGGTGAACCTAAAGAATTATTGGTTTCAACAAGT
GGTAAAAATTATAAACAAGAAAAGGGAGAAAATAGTGGTGCATATATAATTCGGATACCG
TTTGGTCCAAAAGACAAGTATCTAGCTAAAGAACATCTATGGCCTTTCATTCAAGAATTT
GTTGATGGTGCACTCAGCCATATTGTGAGGATGTCAAAAGCCATAGGTGAAGAAACTGGC
CGTGGGCATCCAGTATGGCCTGCTGTGATTCATGGACATTATGCCAGTGCAGGAATTGCT
GCTGCGTTACTTTCTGGAGCACTTAATCTTCCTATGGCGTTCACAGGACATTTTCTTGGG
AAAGATAAATTGGAAGGGCTTCTCAAACAAGGGAGACAAACTAGGGAACAGATAAATATG
ACATACAAAATAATGTGCCGAATTGAGGCCGAGGAGCTATCTCTTGACGCATCTGAGATT
GTCATTGCAAGCACTAGGCAAGAAATAGAAGAGCAGTGGAACTTGTATGATGGTTTTGAG
GTTATACTTGCAAGAAAGCTCCGAGCAAGAGTTAAACGTGGTGCTAATTGTTATGGCCGT
TTTATGCCTCGTATGGTTATAATTCCTCCTGGAGTTGAATTTGGTCACATTATTCATGAT
TTTGATATGGATGGCGAAGAAGAGAATCCATGCCCAGCATCTGAGGATCCACCTATTTGG
TCTCAGATAATGCGCTTCTTTACAAATCCTAGGAAGCCTATGATTCTAGCTGTTGCCCGC
CCTTATCCTGAGAAGAATATTACTACACTTGTAAAGGCATTTGGTGAATGCAGGCCATTA
AGGGAGCTTGCCAATCTTACACTGATAATGGGAAACCGTGAAGCTATATCTAAGATGCAC
AATATGAGTGCTGCTGTCTTGACATCAGTGCTTACATTGATTGACGAATATGACCTGTAT
GGTCAAGTGGCATACCCCAAGCATCATAAACACTCAGAAGTTCCTGACATTTATCGTTTA
GCTGCAAGAACAAAGGGGGCTTTTGTAAATGTAGCTTACTTCGAACAATTTGGAGTTACT
CTGATAGAGGCTGCTATGAATGGTTTGCCTATAATTGCGACAAAAAATGGAGCCCCTGTT
GAAATTAATCAGGTCCTGAACAATGGTCTCCTTGTTGATCCGCACGATCAGAATGCCATT
GCGGATGCACTATATAAACTTCTTTCTGATAAACATCTTTGGTCAAGGTGCAGAGAGAAT
GGACTGACAAATATTCACCAATTCTCGTGGCCTGAACATTGCAAGAATTACCTGTCAAGG
ATACTAACTCTTGGCCCAAGGTCTCCTGCTATTGGTAACAGAGAGGAGCGGAGTAATACA
CCTATTTCAGGAAGGAAGAATATCATTGTTATTTCTGTAGACTCTGTTAACAAGGAAGGT
CTAGTCAGGATAATCAGAAATGCTATTGAGGTCATACATAAAGAAAACATGTCGGGTTCA
ACTGGTTTTGTGCTGTCAACTTCCTTAACGATATCAGAAATACATTCACTGCTACTATCT
GGAGGCATGCTTCCCACTGATTTTGATGCTTTCATCTGCAATAGTGGGAGTAACATTTAC
TATCCTTCACATTCCGGAGAAACGTCAAACAACTCCAAGATTACATTTGCATTAGATCAA
AATCACCAGTCACATATTGAGTATCGTTGGGGAGGAGAAGGCCTAAGGAAATATCTTGTG
AAGTGGGCCACTTCAGTGGTAGAAAGAAAGGGAAGAACAGAGAGACAAATTATTTTTGAA
GATCCAGAGCACTCTTCGGCGTATTGTCTTGCATTTAGAGTGGTTAATCCCAATCATCTT
CCTCCTTTAAAGGAGTTGAGGAAGTTGATGAGAATCCAATCTCTCCGTTGCAATGCATTA
TATAACCACAGCGCTACCAGATTATCTGTAGTCCCTATCCACGCATCACGCTCTCAGGCC
CTAAGGTACCTGTGTATACGATTGGGGATAGAAGTGCCAAATGTTGCAGTCCTCGTGGGT
GAAAGCGGCGATTCAGATTACGAGGAACTGCTGGGGGGTCTCCATAGGACCGTTATCCTA
AAGGGCGAGTTCAACATCGCCGCAAACAGGATCCACACGGTGAGGAGATACCCCCTGCAG
GATGTCGTCGCCCTCGATAGCTCAAACATCATCGGTGTCGACGGCTACACCACGGATGAT
CTGAGGTCTGCCCTGCAGCAGATGGGTATACTGGCACGGTAA

Peptide Sequence

PEP ID

Zm00001d015570_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:5:98829326:98835448:1 gene:Zm00001d015570 transcript:Zm00001d015570_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sucrose-phosphate synthase 1
Sequence

MQFEKEEACRMSKRQPETEKTRADATADMSEDLFEGEKGEDAGDPSVAYGDSTTGSSPKT
SSIDKLYIVLISLHGLVRGENMELGRDSDTGGQIKYVVELAKALSSSPGVYRVDLLTRQI
LAPNFDRSYGEPKELLVSTSGKNYKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEF
VDGALSHIVRMSKAIGEETGRGHPVWPAVIHGHYASAGIAAALLSGALNLPMAFTGHFLG
KDKLEGLLKQGRQTREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFE
VILARKLRARVKRGANCYGRFMPRMVIIPPGVEFGHIIHDFDMDGEEENPCPASEDPPIW
SQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAISKMH
NMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGAFVNVAYFEQFGVT
LIEAAMNGLPIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKLLSDKHLWSRCREN
GLTNIHQFSWPEHCKNYLSRILTLGPRSPAIGNREERSNTPISGRKNIIVISVDSVNKEG
LVRIIRNAIEVIHKENMSGSTGFVLSTSLTISEIHSLLLSGGMLPTDFDAFICNSGSNIY
YPSHSGETSNNSKITFALDQNHQSHIEYRWGGEGLRKYLVKWATSVVERKGRTERQIIFE
DPEHSSAYCLAFRVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVVPIHASRSQA
LRYLCIRLGIEVPNVAVLVGESGDSDYEELLGGLHRTVILKGEFNIAANRIHTVRRYPLQ
DVVALDSSNIIGVDGYTTDDLRSALQQMGILAR

Transcript Sequence

Transcript ID

Zm00001d015570_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:98829326:98835448:1 gene:Zm00001d015570 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sucrose-phosphate synthase 1
Sequence

TAGCTGCTTTTAGCTGGAGACATCCAAACACCCCAACTAATAGTCCAGCTAACTATTAGT
TGCACCCTCAACCATCCATTAGTTCATTAGTTGGTTCAACCTATCTAAAATCAGCTAATA
GTTAGCCAACTAATTGCACTAGGAATTTTTAGCCAGCTAACTATTAGCTCTAGCTCATTC
AAACAAGCCCTTAGTCTACCTCTGATTTACCAGTTGAGCTCAGGTTTTACATTTTACTGC
TTTGGTAACTTTGTAAGACCTAAGTCTACATTAGTTGTAGCACGTACTAAGTTTCCTCTA
TATCAAAGAGCGCAAAGGTCCATATTCTTCTGCTTCTGCTAGGTTATTATTAGAGTTTAT
CTATTTCTTATCTTTCTAGTTTTGTCCTATATTTTTCAAATACATATTTGTATATGCAGT
TCGAGAAAGAAGAAGCTTGTCGTATGTCAAAACGCCAGCCAGAAACTGAGAAAACACGAG
CTGATGCTACTGCAGATATGTCTGAAGATCTCTTTGAAGGAGAAAAAGGAGAAGATGCTG
GTGATCCATCTGTCGCATACGGGGACAGCACCACGGGGAGCTCACCTAAAACAAGTTCAA
TTGACAAGCTATACATAGTATTGATCAGTCTACATGGTCTGGTCCGTGGTGAGAATATGG
AGCTTGGCCGAGATTCAGATACGGGTGGCCAGATCAAATATGTGGTTGAACTTGCTAAAG
CATTAAGTTCATCCCCAGGAGTTTACCGGGTTGACCTGCTAACAAGACAAATCTTAGCAC
CAAATTTTGATCGTAGTTATGGTGAACCTAAAGAATTATTGGTTTCAACAAGTGGTAAAA
ATTATAAACAAGAAAAGGGAGAAAATAGTGGTGCATATATAATTCGGATACCGTTTGGTC
CAAAAGACAAGTATCTAGCTAAAGAACATCTATGGCCTTTCATTCAAGAATTTGTTGATG
GTGCACTCAGCCATATTGTGAGGATGTCAAAAGCCATAGGTGAAGAAACTGGCCGTGGGC
ATCCAGTATGGCCTGCTGTGATTCATGGACATTATGCCAGTGCAGGAATTGCTGCTGCGT
TACTTTCTGGAGCACTTAATCTTCCTATGGCGTTCACAGGACATTTTCTTGGGAAAGATA
AATTGGAAGGGCTTCTCAAACAAGGGAGACAAACTAGGGAACAGATAAATATGACATACA
AAATAATGTGCCGAATTGAGGCCGAGGAGCTATCTCTTGACGCATCTGAGATTGTCATTG
CAAGCACTAGGCAAGAAATAGAAGAGCAGTGGAACTTGTATGATGGTTTTGAGGTTATAC
TTGCAAGAAAGCTCCGAGCAAGAGTTAAACGTGGTGCTAATTGTTATGGCCGTTTTATGC
CTCGTATGGTTATAATTCCTCCTGGAGTTGAATTTGGTCACATTATTCATGATTTTGATA
TGGATGGCGAAGAAGAGAATCCATGCCCAGCATCTGAGGATCCACCTATTTGGTCTCAGA
TAATGCGCTTCTTTACAAATCCTAGGAAGCCTATGATTCTAGCTGTTGCCCGCCCTTATC
CTGAGAAGAATATTACTACACTTGTAAAGGCATTTGGTGAATGCAGGCCATTAAGGGAGC
TTGCCAATCTTACACTGATAATGGGAAACCGTGAAGCTATATCTAAGATGCACAATATGA
GTGCTGCTGTCTTGACATCAGTGCTTACATTGATTGACGAATATGACCTGTATGGTCAAG
TGGCATACCCCAAGCATCATAAACACTCAGAAGTTCCTGACATTTATCGTTTAGCTGCAA
GAACAAAGGGGGCTTTTGTAAATGTAGCTTACTTCGAACAATTTGGAGTTACTCTGATAG
AGGCTGCTATGAATGGTTTGCCTATAATTGCGACAAAAAATGGAGCCCCTGTTGAAATTA
ATCAGGTCCTGAACAATGGTCTCCTTGTTGATCCGCACGATCAGAATGCCATTGCGGATG
CACTATATAAACTTCTTTCTGATAAACATCTTTGGTCAAGGTGCAGAGAGAATGGACTGA
CAAATATTCACCAATTCTCGTGGCCTGAACATTGCAAGAATTACCTGTCAAGGATACTAA
CTCTTGGCCCAAGGTCTCCTGCTATTGGTAACAGAGAGGAGCGGAGTAATACACCTATTT
CAGGAAGGAAGAATATCATTGTTATTTCTGTAGACTCTGTTAACAAGGAAGGTCTAGTCA
GGATAATCAGAAATGCTATTGAGGTCATACATAAAGAAAACATGTCGGGTTCAACTGGTT
TTGTGCTGTCAACTTCCTTAACGATATCAGAAATACATTCACTGCTACTATCTGGAGGCA
TGCTTCCCACTGATTTTGATGCTTTCATCTGCAATAGTGGGAGTAACATTTACTATCCTT
CACATTCCGGAGAAACGTCAAACAACTCCAAGATTACATTTGCATTAGATCAAAATCACC
AGTCACATATTGAGTATCGTTGGGGAGGAGAAGGCCTAAGGAAATATCTTGTGAAGTGGG
CCACTTCAGTGGTAGAAAGAAAGGGAAGAACAGAGAGACAAATTATTTTTGAAGATCCAG
AGCACTCTTCGGCGTATTGTCTTGCATTTAGAGTGGTTAATCCCAATCATCTTCCTCCTT
TAAAGGAGTTGAGGAAGTTGATGAGAATCCAATCTCTCCGTTGCAATGCATTATATAACC
ACAGCGCTACCAGATTATCTGTAGTCCCTATCCACGCATCACGCTCTCAGGCCCTAAGGT
ACCTGTGTATACGATTGGGGATAGAAGTGCCAAATGTTGCAGTCCTCGTGGGTGAAAGCG
GCGATTCAGATTACGAGGAACTGCTGGGGGGTCTCCATAGGACCGTTATCCTAAAGGGCG
AGTTCAACATCGCCGCAAACAGGATCCACACGGTGAGGAGATACCCCCTGCAGGATGTCG
TCGCCCTCGATAGCTCAAACATCATCGGTGTCGACGGCTACACCACGGATGATCTGAGGT
CTGCCCTGCAGCAGATGGGTATACTGGCACGGTAACACCTTCCGGAGCTTCCGTTTCCAC
TACCAGGTCAACGAAGAGAAACGAGAAAACAGACAGAATGGTGACGAAACAAGTGCGACC
GTTTCCATGCTCGATGGGAATGCCGATTTTGCATTGTAGGCTGTAGCGGTTGTGTTCGTG
TGTGTGTGCCCGCGCGCGGTGGTGGCCTATTCTTGTGCTGTGAATAACTGCCCCTCCTTT
GTTTGTGATATGCCAAAATTTTGAAGTGAGTACAGTACAACCAAACATGTTGATGATGGA
AAAACGAATGGAGAAAGGGGAAAAACAAACAAAAATGGTTTGGGACGGCAGTGTTCCATG
GTATGGTACGCTGTTGTTGAATGCCTGGGAAATGGGTGATTCCGCTGTTCGT