Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015566_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:98133569:98147630:1 gene:Zm00001d015566 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated protein
Sequence	ATGGCGACCGGTGGCAAGTCCGCTGCCCCTCAGCCACCTCCCGCCGCGTCCTCCTCCTCC GAACGCGCGCTGGAGTCAGTCCACTTCTCTTCCGGAAACCCTCGCATCGAGGAGACCCGC GGCGTCGTCGTCCTCCACCCCGACCCGCCCGCGGCCGCCTCCTGGTCTCATGTCCCGTTG GGGAGGAAGCCGCGGGTGTGCGTGCTCGCCGTGCCCAACCACATGACCTACGCCGACTTC TGCCGTTTCTGCGGCGCCTTCGTCCCTCACACACTCGAGATGCGCATCGTCAGAACTGAT GGAGCAGAGGACCAGTACAGCGTTCTTATAAATTTTGACACTCAGAGCTCCACAGACAGC TTCTATAAGCACTTCAACGGGAAGCAGTTCTCTTCGCTGGAGGGGGGTGTCTGCCATGTC CGTTTTGTGGAAGAGGTGCACTACACTGAATTGATTGAGCATGCACATACCTCAGTTACA AACTTGGCTGAGCAACCTACATGCCCAGTATGTCTTGAACGACTTGACCAAGATCCTGGA GGTATTCTCACAACAATCTGCAACCATTCTTTCCACTGCTCGTGCATATCAAAATGGACA GACTCCTCATGCCCGGTCTGTAGATATTGTCAGCAGCAACCAGAGAAATCCATGTGTTCT ATTTGCGGAACTTCGGAGAATCTTTGGATATGTCTAATCTGTGGCCATGTTGGCTGTGGA AGGTACAAGGGTGGACATGCTATTGAACACTGGAAGGAAACTCAACATTGTTATTCACTT GAGTTAGAGACACAAAAAGTGTGGGACTATGCTGGGGACAACTATGTACATCGGCTTATT CAGTCAAAAACAGATGGAAAGCTAGTTGAGTACAATTTCCATGGTGATCACACAGCAGAG AGCACGTGTTCACTATGCAGTGGTGATGCCGCAATGGATGAAGCTCTACTGAACAGTAAA TTTGAAGCTATTGTTGAAGAGTACAATGATCTCGTCACATTTCAACTTGAAAAGCAAAGA AATTACTATGAGTCACTTCTACTAGAAGTCAAGGAGGAAACTGAGAAAGAAATTTCTGCT GCTACTGAGAAAGCCATGAGCACAAAACTCCAAAAGTTGGAAGTAAAGTTTGACAAGTGT ATGGAAGAGAAAAAATTTCTTGATGAAGTAAATGGCAATCTTGTCAAGAATCAGGAGATG TGGATTGAAACTATACGAAAAGCACAAGCAAGGGAGCAAGCTGCGCTCAGATTAAAAGAT GAGAAGATCGAAAAACTTCAGGAAGAGCTAAGAGGTTTGATAGCCCATTTCGACTGCCAA AGTGACACTGCACAAGCTTCAAATGCGATCTCGAGCGATATACCAGGGGGCATGATTCTT CCGGTAGCATCAGAATCGTCCTCGAGCGGCGGCGTTGTTGGTGGCACTGGAAACGGGGAG CAAAATTGA

Peptide Sequence

PEP ID	Zm00001d015566_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:98133569:98147630:1 gene:Zm00001d015566 transcript:Zm00001d015566_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated protein
Sequence	MATGGKSAAPQPPPAASSSSERALESVHFSSGNPRIEETRGVVVLHPDPPAAASWSHVPL GRKPRVCVLAVPNHMTYADFCRFCGAFVPHTLEMRIVRTDGAEDQYSVLINFDTQSSTDS FYKHFNGKQFSSLEGGVCHVRFVEEVHYTELIEHAHTSVTNLAEQPTCPVCLERLDQDPG GILTTICNHSFHCSCISKWTDSSCPVCRYCQQQPEKSMCSICGTSENLWICLICGHVGCG RYKGGHAIEHWKETQHCYSLELETQKVWDYAGDNYVHRLIQSKTDGKLVEYNFHGDHTAE STCSLCSGDAAMDEALLNSKFEAIVEEYNDLVTFQLEKQRNYYESLLLEVKEETEKEISA ATEKAMSTKLQKLEVKFDKCMEEKKFLDEVNGNLVKNQEMWIETIRKAQAREQAALRLKD EKIEKLQEELRGLIAHFDCQSDTAQASNAISSDIPGGMILPVASESSSSGGVVGGTGNGE QN

Transcript Sequence

Transcript ID	Zm00001d015566_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:98133569:98147630:1 gene:Zm00001d015566 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCA1-associated protein
Sequence	GAGTCTCGAGAGTCGAGACTCAGGGGACCTGATTTCCTCGTCCGGCCATGGCGACCGGTG GCAAGTCCGCTGCCCCTCAGCCACCTCCCGCCGCGTCCTCCTCCTCCGAACGCGCGCTGG AGTCAGTCCACTTCTCTTCCGGAAACCCTCGCATCGAGGAGACCCGCGGCGTCGTCGTCC TCCACCCCGACCCGCCCGCGGCCGCCTCCTGGTCTCATGTCCCGTTGGGGAGGAAGCCGC GGGTGTGCGTGCTCGCCGTGCCCAACCACATGACCTACGCCGACTTCTGCCGTTTCTGCG GCGCCTTCGTCCCTCACACACTCGAGATGCGCATCGTCAGAACTGATGGAGCAGAGGACC AGTACAGCGTTCTTATAAATTTTGACACTCAGAGCTCCACAGACAGCTTCTATAAGCACT TCAACGGGAAGCAGTTCTCTTCGCTGGAGGGGGGTGTCTGCCATGTCCGTTTTGTGGAAG AGGTGCACTACACTGAATTGATTGAGCATGCACATACCTCAGTTACAAACTTGGCTGAGC AACCTACATGCCCAGTATGTCTTGAACGACTTGACCAAGATCCTGGAGGTATTCTCACAA CAATCTGCAACCATTCTTTCCACTGCTCGTGCATATCAAAATGGACAGACTCCTCATGCC CGGTCTGTAGATATTGTCAGCAGCAACCAGAGAAATCCATGTGTTCTATTTGCGGAACTT CGGAGAATCTTTGGATATGTCTAATCTGTGGCCATGTTGGCTGTGGAAGGTACAAGGGTG GACATGCTATTGAACACTGGAAGGAAACTCAACATTGTTATTCACTTGAGTTAGAGACAC AAAAAGTGTGGGACTATGCTGGGGACAACTATGTACATCGGCTTATTCAGTCAAAAACAG ATGGAAAGCTAGTTGAGTACAATTTCCATGGTGATCACACAGCAGAGAGCACGTGTTCAC TATGCAGTGGTGATGCCGCAATGGATGAAGCTCTACTGAACAGTAAATTTGAAGCTATTG TTGAAGAGTACAATGATCTCGTCACATTTCAACTTGAAAAGCAAAGAAATTACTATGAGT CACTTCTACTAGAAGTCAAGGAGGAAACTGAGAAAGAAATTTCTGCTGCTACTGAGAAAG CCATGAGCACAAAACTCCAAAAGTTGGAAGTAAAGTTTGACAAGTGTATGGAAGAGAAAA AATTTCTTGATGAAGTAAATGGCAATCTTGTCAAGAATCAGGAGATGTGGATTGAAACTA TACGAAAAGCACAAGCAAGGGAGCAAGCTGCGCTCAGATTAAAAGATGAGAAGATCGAAA AACTTCAGGAAGAGCTAAGAGGTTTGATAGCCCATTTCGACTGCCAAAGTGACACTGCAC AAGCTTCAAATGCGATCTCGAGCGATATACCAGGGGGCATGATTCTTCCGGTAGCATCAG AATCGTCCTCGAGCGGCGGCGTTGTTGGTGGCACTGGAAACGGGGAGCAAAATTGAGTAA ACTGCGCCCTGTATAAAGCACGTTTGGATCTTAGGGACCTAGGTATATTCTTGCTTCCAA ACCCCCACCGTTGTATGTTCAGTTAGGGTAATACACACTTGTTAGCTGTCACCTCACTGC CCCTCGATTCTACTGTCACTAGCCGCTAGTAGTGTGGTACTAGGGATGAAAACGATTTCA TTTTTTTTTGGTTTTTCGAAATTCGTTTCCGATTTTTCGACCGTATTTAATGGTTATGGT ATTTTTCGAAAACATAATTGGTTATCGGAATTTTATATCGAAATTGAATTAATGTTTT