Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015520_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:95614609:95620842:-1 gene:Zm00001d015520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB4 mitochondrial
Sequence

ATGGCGCGCTCCGCCGCGTCCAGGCTAGCGCGCGCAGCCCGCGCGGTTGTGGTCGCCACC
AAACGCCGCCAGGGCCCCGGCGTTAGCCGCGAGGTACTCCCGCGGTCCCTCGCGCCGCTC
GCGGGTGATGCCTCCGCCTTCGGCGCCACCACGGGGAGGCCGGCGTGGTTTGCCGCGCCT
TTGGGGCGGTTTCCCGTCGGGGCCGGCGGAGCTGGGCTCCAGGTGCCGCCGCGCCGGCTG
TTCCACTCTACTACGCCCGCTCAGTACAGCGCCGCCGGCACCTCGTCCTCGTCTCAGATA
ACACCAGGAGAATTCACTGAGATGGCCTGGGAGGGGATTGTTGGTGCGGTTGATGCAGCA
AGATTATCAAAACAACAGATAGTAGAGTCGGAGCACTTGATGAAAGCTCTTCTGGAGCAG
AAGGATGGGCTAGCACGCAGGATATTTTCAAAAGCGGGTGTAGATAACACATCAGTCCTG
CAAGCTACTGACGACTTTATTTCTAGACAGCCAAAGGTTGTCGGTGATACAACTGGGCCA
ATTATAGGATCAAGTTTTGTGTTGATATTGGATAATGCAAAGAAGCATAAAAAAGAACAT
GGTGATGAATTTGTGTCAGTTGAGCACATCCTGCAAGCATTCACTTCAGATAAAAGGTTT
GGACAACAGCTCTTCAAAGATCTGAAAATTGTGGAGAATGATCTTAAAGAAGCTATTTCA
GCAGTACGGGGAAGCCAGCGAGTCACAGATCAGAATCCAGAAGGAAAATACCAGGCTCTA
GAGAAGTATGGTATTGACTTGACAGAATCAGCTCGACGTGGAAAACTTGATCCTGTTATA
GGCCGTGATGATGAAGTGCGCAGATGCATTCAGATCCTATGTAGAAGAACTAAAAACAAT
CCTGTAATCATTGGCGAGCCAGGAGTTGGCAAAACTGCTATTGCTGAAGGACTGGCTCAG
CGTATTGTACGAGGAGATGTTCCTGAACCTCTAATGAATAGAAGGCTTATTTCGTTGGAT
ATGGGAGCATTACTTGCTGGAGCTAAATTCCGTGGTGATTTTGAGGAGAGATTAAAGGCT
GTTCTAAAGGAGGTCACTGCTTCTAATGGACAGATCATCTTGTTCATTGATGAGATCCAT
ACTGTTGTTGGTGCAGGAGCTGCTGGTGGAGCGATGGATGCTGGTAACCTGTTGAAGCCA
ATGCTAGGCCGTGGAGAACTCCGCTGCATTGGAGCAACAACATTGGATGAGTACAGGAAG
TACATTGAGAAGGATGCTGCTCTTGAGCGTAGGTTCCAGCAGGTTTATTGTGGTGAGCCA
GCAGTTGAGGATACCATCTCCATATTGCGCGGTTTGCGAGAACGATATGAACTGCATCAT
GGTGTTAAGATATCAGATGGGGCTCTTGTTGCTGCTGCAGTTCTATCCGATCGATACATC
ACTGGACGTTTTTTGCCTGACAAAGCCATTGATCTAGTTGATGAAGCAGCTGCCAAGCTC
AAAATGGAGATAACATCAAAGCCTATTGAATTGGATGAGGTAGACAGAGAAATCATAAGG
CTTGAAATGGAAAAGCTCTCATTGAAGAATGATACAGATAAGGCCTCCAAAGAACGGCTG
AGCAAGCTTGAAGCTGAACTAGAATCTCTCAAGCAGAAGCAGAAAAGTCTTTCAGAACAT
TGGGAATATGAGAAGTCTTTGATGACTCGTATAAGATCAATTAAAGAAGAGACTGACAGA
GTGAACCTGGAGATTGAAGCTGCTGAGAGAGAATATGATTTGAATCGTGCTGCTGAACTG
AAGTATGGAACACTTTTATCACTTCAGAAACAGCTGGAAGAGGCTGAGAATAAACTTGTT
GAATTCCAGCAATCAGGGAAGTCAATGCTTCGAGAAGAGGTGACTGACGTGGACATTGCT
GAGATTGTGAGCAAGTGGACTGGTATTCCAGTGTCGAACCTTCAACAGTCTGAAAGGGAA
AAGCTGCTGCTGCTGGAAGATGTACTTCACAAGAGGGTTATTGGCCAAGACATTGCAGTT
AAATCAGTGGCCAATGCCATCCGCCGTTCTAGGGCAGGCCTATCAGATCCTAACCGTCCG
ATAGCAAGCTTCATGTTTATGGGACCTACAGGTGTGGGAAAGACTGAGCTGGGTAAGACA
CTGGCTGAATTCCTTTTCAACACTGAGAATGCCCTAATACGAATTGATATGAGTGAGTAC
ATGGAGAAGCACGCCGTCTCCCGTTTGGTTGGTGCCCCACCTGGATATGTTGGTTATGAG
GAAGGGGGCCAATTGACTGAATCAGTTCGTCGGCGACCTTACTCAGTTGTTCTGTTTGAT
GAAATTGAGAAAGCACACCAGGAAGTCTTTAACATATTGTTGCAACTGTTGGATGATGGA
AGAATCACTGATTCACAAGGCAGGACTGTCAGCTTCACTAACTGTGTCATAATCATGACA
TCGAACATTGGGTCACCATTGATCCTTGACACACTTAGAAACACCACAGACAGCAAGGAG
GCCGTGTATGAGATAATGAAGAAGCAGGTGATTGAGATGGCCCGGCAAACATTCCGGCCA
GAATTCTTGAACAGGATAGATGAGTACATTGTGTTCCAACCACTGGATACAACCGAGATC
AACCATATCGTGGAGATCCAGCTGAATCGGGTTCAGAACCGGCTGAGACAACAGAAGATT
CATCTCCAGTACACTGCGGAAGCCGTTGAGCTTCTGGGGTCTCTTGGCTTTGACCCTAAC
TATGGTGCGAGGCCTGTCAAGAGAGTGATTCAGCAGATGGTGGAGAACGAGATTGCCCTT
GGTGTCCTGAAGGGCGATTTCAAAGAAGACGATACTGTCCTCGTGGATGTAAGTTCGGCG
GCGATCGCAAAAGGACTCGCTCCGCAGAAGAAGCTTGTCCTTCAGAGGGTAGAAAACGGA
AACGACGAGTTAGTTGCTAATGACTAG

Peptide Sequence

PEP ID

Zm00001d015520_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:95614609:95620842:-1 gene:Zm00001d015520 transcript:Zm00001d015520_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB4 mitochondrial
Sequence

MARSAASRLARAARAVVVATKRRQGPGVSREVLPRSLAPLAGDASAFGATTGRPAWFAAP
LGRFPVGAGGAGLQVPPRRLFHSTTPAQYSAAGTSSSSQITPGEFTEMAWEGIVGAVDAA
RLSKQQIVESEHLMKALLEQKDGLARRIFSKAGVDNTSVLQATDDFISRQPKVVGDTTGP
IIGSSFVLILDNAKKHKKEHGDEFVSVEHILQAFTSDKRFGQQLFKDLKIVENDLKEAIS
AVRGSQRVTDQNPEGKYQALEKYGIDLTESARRGKLDPVIGRDDEVRRCIQILCRRTKNN
PVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLMNRRLISLDMGALLAGAKFRGDFEERLKA
VLKEVTASNGQIILFIDEIHTVVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLDEYRK
YIEKDAALERRFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVAAAVLSDRYI
TGRFLPDKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKERL
SKLEAELESLKQKQKSLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAEL
KYGTLLSLQKQLEEAENKLVEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSERE
KLLLLEDVLHKRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKT
LAEFLFNTENALIRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTESVRRRPYSVVLFD
EIEKAHQEVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTTDSKE
AVYEIMKKQVIEMARQTFRPEFLNRIDEYIVFQPLDTTEINHIVEIQLNRVQNRLRQQKI
HLQYTAEAVELLGSLGFDPNYGARPVKRVIQQMVENEIALGVLKGDFKEDDTVLVDVSSA
AIAKGLAPQKKLVLQRVENGNDELVAND

Transcript Sequence

Transcript ID

Zm00001d015520_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:95614609:95620842:-1 gene:Zm00001d015520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein ClpB4 mitochondrial
Sequence

GCAGCGAAAGTGAAGAACTCGCGCCGAACGCAGTTCTCCATCTTATCTCGACGATGAGTG
CCCCCCCTTGAGTCGGCTACGAACGGTATCCGTCGGTTACGGATCAGACGGTTGACGTGC
ACGGAGGTCGACGAACACCGCATCTAGTAGAAGCTTCTGCAACCTTCCATTCGCTTCGCC
TGCGCTGCCGGCACACCTTCTTTCCCCTTCTCCAAGCGTCGCCACTCCTCTCCGCTGTGC
CCTCCCAACAACCGTCGCCGCCGCCACAAATAACCGAGCCAGCATCTTCGCGGCGTAACC
GCTTGGCCAGTCCAGTGTCCGCAGCAAAGCGCTAAACCCAGACCCAAAACCCTCCGCCAC
GATGGCGCGCTCCGCCGCGTCCAGGCTAGCGCGCGCAGCCCGCGCGGTTGTGGTCGCCAC
CAAACGCCGCCAGGGCCCCGGCGTTAGCCGCGAGGTACTCCCGCGGTCCCTCGCGCCGCT
CGCGGGTGATGCCTCCGCCTTCGGCGCCACCACGGGGAGGCCGGCGTGGTTTGCCGCGCC
TTTGGGGCGGTTTCCCGTCGGGGCCGGCGGAGCTGGGCTCCAGGTGCCGCCGCGCCGGCT
GTTCCACTCTACTACGCCCGCTCAGTACAGCGCCGCCGGCACCTCGTCCTCGTCTCAGAT
AACACCAGGAGAATTCACTGAGATGGCCTGGGAGGGGATTGTTGGTGCGGTTGATGCAGC
AAGATTATCAAAACAACAGATAGTAGAGTCGGAGCACTTGATGAAAGCTCTTCTGGAGCA
GAAGGATGGGCTAGCACGCAGGATATTTTCAAAAGCGGGTGTAGATAACACATCAGTCCT
GCAAGCTACTGACGACTTTATTTCTAGACAGCCAAAGGTTGTCGGTGATACAACTGGGCC
AATTATAGGATCAAGTTTTGTGTTGATATTGGATAATGCAAAGAAGCATAAAAAAGAACA
TGGTGATGAATTTGTGTCAGTTGAGCACATCCTGCAAGCATTCACTTCAGATAAAAGGTT
TGGACAACAGCTCTTCAAAGATCTGAAAATTGTGGAGAATGATCTTAAAGAAGCTATTTC
AGCAGTACGGGGAAGCCAGCGAGTCACAGATCAGAATCCAGAAGGAAAATACCAGGCTCT
AGAGAAGTATGGTATTGACTTGACAGAATCAGCTCGACGTGGAAAACTTGATCCTGTTAT
AGGCCGTGATGATGAAGTGCGCAGATGCATTCAGATCCTATGTAGAAGAACTAAAAACAA
TCCTGTAATCATTGGCGAGCCAGGAGTTGGCAAAACTGCTATTGCTGAAGGACTGGCTCA
GCGTATTGTACGAGGAGATGTTCCTGAACCTCTAATGAATAGAAGGCTTATTTCGTTGGA
TATGGGAGCATTACTTGCTGGAGCTAAATTCCGTGGTGATTTTGAGGAGAGATTAAAGGC
TGTTCTAAAGGAGGTCACTGCTTCTAATGGACAGATCATCTTGTTCATTGATGAGATCCA
TACTGTTGTTGGTGCAGGAGCTGCTGGTGGAGCGATGGATGCTGGTAACCTGTTGAAGCC
AATGCTAGGCCGTGGAGAACTCCGCTGCATTGGAGCAACAACATTGGATGAGTACAGGAA
GTACATTGAGAAGGATGCTGCTCTTGAGCGTAGGTTCCAGCAGGTTTATTGTGGTGAGCC
AGCAGTTGAGGATACCATCTCCATATTGCGCGGTTTGCGAGAACGATATGAACTGCATCA
TGGTGTTAAGATATCAGATGGGGCTCTTGTTGCTGCTGCAGTTCTATCCGATCGATACAT
CACTGGACGTTTTTTGCCTGACAAAGCCATTGATCTAGTTGATGAAGCAGCTGCCAAGCT
CAAAATGGAGATAACATCAAAGCCTATTGAATTGGATGAGGTAGACAGAGAAATCATAAG
GCTTGAAATGGAAAAGCTCTCATTGAAGAATGATACAGATAAGGCCTCCAAAGAACGGCT
GAGCAAGCTTGAAGCTGAACTAGAATCTCTCAAGCAGAAGCAGAAAAGTCTTTCAGAACA
TTGGGAATATGAGAAGTCTTTGATGACTCGTATAAGATCAATTAAAGAAGAGACTGACAG
AGTGAACCTGGAGATTGAAGCTGCTGAGAGAGAATATGATTTGAATCGTGCTGCTGAACT
GAAGTATGGAACACTTTTATCACTTCAGAAACAGCTGGAAGAGGCTGAGAATAAACTTGT
TGAATTCCAGCAATCAGGGAAGTCAATGCTTCGAGAAGAGGTGACTGACGTGGACATTGC
TGAGATTGTGAGCAAGTGGACTGGTATTCCAGTGTCGAACCTTCAACAGTCTGAAAGGGA
AAAGCTGCTGCTGCTGGAAGATGTACTTCACAAGAGGGTTATTGGCCAAGACATTGCAGT
TAAATCAGTGGCCAATGCCATCCGCCGTTCTAGGGCAGGCCTATCAGATCCTAACCGTCC
GATAGCAAGCTTCATGTTTATGGGACCTACAGGTGTGGGAAAGACTGAGCTGGGTAAGAC
ACTGGCTGAATTCCTTTTCAACACTGAGAATGCCCTAATACGAATTGATATGAGTGAGTA
CATGGAGAAGCACGCCGTCTCCCGTTTGGTTGGTGCCCCACCTGGATATGTTGGTTATGA
GGAAGGGGGCCAATTGACTGAATCAGTTCGTCGGCGACCTTACTCAGTTGTTCTGTTTGA
TGAAATTGAGAAAGCACACCAGGAAGTCTTTAACATATTGTTGCAACTGTTGGATGATGG
AAGAATCACTGATTCACAAGGCAGGACTGTCAGCTTCACTAACTGTGTCATAATCATGAC
ATCGAACATTGGGTCACCATTGATCCTTGACACACTTAGAAACACCACAGACAGCAAGGA
GGCCGTGTATGAGATAATGAAGAAGCAGGTGATTGAGATGGCCCGGCAAACATTCCGGCC
AGAATTCTTGAACAGGATAGATGAGTACATTGTGTTCCAACCACTGGATACAACCGAGAT
CAACCATATCGTGGAGATCCAGCTGAATCGGGTTCAGAACCGGCTGAGACAACAGAAGAT
TCATCTCCAGTACACTGCGGAAGCCGTTGAGCTTCTGGGGTCTCTTGGCTTTGACCCTAA
CTATGGTGCGAGGCCTGTCAAGAGAGTGATTCAGCAGATGGTGGAGAACGAGATTGCCCT
TGGTGTCCTGAAGGGCGATTTCAAAGAAGACGATACTGTCCTCGTGGATGTAAGTTCGGC
GGCGATCGCAAAAGGACTCGCTCCGCAGAAGAAGCTTGTCCTTCAGAGGGTAGAAAACGG
AAACGACGAGTTAGTTGCTAATGACTAGGTCAGATGGGATCACCTTTTAGCGAGAATGTT
CAAGTGTGATGAAACGCAGCTGTTAGCTCTGCGTTTTCGCGTATGAGAAACTTGGCCTTT
TATTTAGGTTCTACCATGAAGTCGTGTCCAGTCTCCGGTGGCAAAACTCAATGTTCAAAT
CTCTCTGAATATAATCTTGAGAGCTCTACCTCAAGAGCTGT