Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015515_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:95183890:95185688:1 gene:Zm00001d015515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY-transcription factor 48 description:Probable WRKY transcription factor 40
Sequence	ATGGATCCATGGATCAGCAGCCAGCCTTCTCTGAGCCTTGACCTGCGCGTCGGCCTGCCG CCGCTCAGCCTCCACCACCAGGCGCCGGTGGCCGTCGCCTTGCCCAGGCCCAAGCTGCTC GTCGAGGAGAACTTCCTCCTGCCGCCTCCAAAGAAAGAACCAGAGGTCGCGGCTCTCGAG ACGGAGCTGCAGCGGATGGGCGAGGAGAACCGGCGCCTGGCGGAGGCGCTGGCCGAGGTG GCCTCCAAGTACGAGGCGCTGCGGGGGCAGTACACGGAGATGGTGGCCGCGGCGGCCACG GCCTGCGGGAACCACCCGTCGTCCACGTCGGAGGGCGGGTCCGTGTCGCCGTCGCGGAAG CGCAAGAGCGAGAGCACGGACACCGCGCCGCCCGCGCAGCAGCTACTGCACCAGCACTAC CCGGCGGTGGCGCCGGACCAGACGGAGTGCACCTCGGGCGAGCCGTGCAAGCGCATCCGG GAGGCGGAGTGCAAGCCCAGGGTGTCGAAGCTGCACGTGCACGCCGACCCGGCCGACCTC AGCCTGGTGGTCAAGGACGGGTACCAGTGGCGCAAGTACGGGCAGAAGGTTACCAAGGAC AACCCCTGCCCGCGGGCCTACTTCCGCTGCTCCTTCGCCCCGGCCTGCCCAGTCAAGAAG AAGGTGCAGCGCAGCGCCGACGACCCCACCATCCTGGTCGCCACGTACGAGGGCGACCAC AACCACGGCCAGCCCCCGCCACAGGCGCAGGCGCCGCACGACGGCTCCAGCCCTGGCGCC AGCAAGAAGCCGCCGTCGCCGCCGAGGCCGGTCGCCGCCGCTCCGGCGCCGCTCCACCAC CAGCAGGTCCAGCAGCACCAGCAGCAGCAGGCGGTTGGCGCGGTGAAATGCGAGCCGCCC GTGGCCGCGGCGGCGTCGGAGCTCATCCGGCGGAACCTCGCGGAGCAGATGGCCATGACG CTGACGCGGGACCCCAGCTTCAAGGCGGCGTTCGTCACCGCGCTGTCCGGCCGGCTCTTC GAGATGTCGCCGACCAAGGACTGA

Peptide Sequence

PEP ID	Zm00001d015515_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:95183890:95185688:1 gene:Zm00001d015515 transcript:Zm00001d015515_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY-transcription factor 48 description:Probable WRKY transcription factor 40
Sequence	MDPWISSQPSLSLDLRVGLPPLSLHHQAPVAVALPRPKLLVEENFLLPPPKKEPEVAALE TELQRMGEENRRLAEALAEVASKYEALRGQYTEMVAAAATACGNHPSSTSEGGSVSPSRK RKSESTDTAPPAQQLLHQHYPAVAPDQTECTSGEPCKRIREAECKPRVSKLHVHADPADL SLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDPTILVATYEGDH NHGQPPPQAQAPHDGSSPGASKKPPSPPRPVAAAPAPLHHQQVQQHQQQQAVGAVKCEPP VAAAASELIRRNLAEQMAMTLTRDPSFKAAFVTALSGRLFEMSPTKD

Transcript Sequence

Transcript ID	Zm00001d015515_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:95183890:95185688:1 gene:Zm00001d015515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY-transcription factor 48 description:Probable WRKY transcription factor 40
Sequence	ACTCCAACTCTCAAGCGTCTCTACTCCTCTTCCTCCTCTCTCTACTCTCCAAGTTCTCTT CTCCGTCGACCGCTCTACACGTCTCTTGTCGACCTGGACACCGAGGTGGAAGAAGGAAGC AGTCAGCAGATGGATCCATGGATCAGCAGCCAGCCTTCTCTGAGCCTTGACCTGCGCGTC GGCCTGCCGCCGCTCAGCCTCCACCACCAGGCGCCGGTGGCCGTCGCCTTGCCCAGGCCC AAGCTGCTCGTCGAGGAGAACTTCCTCCTGCCGCCTCCAAAGAAAGAACCAGAGGTCGCG GCTCTCGAGACGGAGCTGCAGCGGATGGGCGAGGAGAACCGGCGCCTGGCGGAGGCGCTG GCCGAGGTGGCCTCCAAGTACGAGGCGCTGCGGGGGCAGTACACGGAGATGGTGGCCGCG GCGGCCACGGCCTGCGGGAACCACCCGTCGTCCACGTCGGAGGGCGGGTCCGTGTCGCCG TCGCGGAAGCGCAAGAGCGAGAGCACGGACACCGCGCCGCCCGCGCAGCAGCTACTGCAC CAGCACTACCCGGCGGTGGCGCCGGACCAGACGGAGTGCACCTCGGGCGAGCCGTGCAAG CGCATCCGGGAGGCGGAGTGCAAGCCCAGGGTGTCGAAGCTGCACGTGCACGCCGACCCG GCCGACCTCAGCCTGGTGGTCAAGGACGGGTACCAGTGGCGCAAGTACGGGCAGAAGGTT ACCAAGGACAACCCCTGCCCGCGGGCCTACTTCCGCTGCTCCTTCGCCCCGGCCTGCCCA GTCAAGAAGAAGGTGCAGCGCAGCGCCGACGACCCCACCATCCTGGTCGCCACGTACGAG GGCGACCACAACCACGGCCAGCCCCCGCCACAGGCGCAGGCGCCGCACGACGGCTCCAGC CCTGGCGCCAGCAAGAAGCCGCCGTCGCCGCCGAGGCCGGTCGCCGCCGCTCCGGCGCCG CTCCACCACCAGCAGGTCCAGCAGCACCAGCAGCAGCAGGCGGTTGGCGCGGTGAAATGC GAGCCGCCCGTGGCCGCGGCGGCGTCGGAGCTCATCCGGCGGAACCTCGCGGAGCAGATG GCCATGACGCTGACGCGGGACCCCAGCTTCAAGGCGGCGTTCGTCACCGCGCTGTCCGGC CGGCTCTTCGAGATGTCGCCGACCAAGGACTGACGGAACGGATCGGATGGATTGGGAGAT TGGCATCGCAGGAGATTCTGGATCAGATTGTCTTCGAGCGCACGCCGCAATGGTCAACTG CGCAGCGCTGGCTTGGCTGTCAGAGCGAAACAGCGGTAACAGAGCAAGACACGAGGGGTC TGCACTCTGCAGTTGTGCAGGAGGAGGAACAGACACAAGGGGAGGACGGCGCGCGGCCGG ACATGGCGTGGAACAGAGATCGTCGTCACCGCCGGCGGGGGTGTGGTCGACGACGCGACA TGCGAAACACTACGTGCTAGCTAGCATAGGAAAAAACAACATGAAATCGTACAACCAACC AATCCCTCGCACTGTTTTAGTTGTTAGCTGTAGGCGAAACTGTTCATCCAATTGATCAAA TGAAACTTATTTTTTCCCTAGCACTATGTTTCATGAGAATGAGACCAGGAATGAACCAAC TTGAGTTTGAAAATTTCCATAGGGGAGTAATAATAACAGAGGTAT