Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015505_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:94167247:94184406:1 gene:Zm00001d015505 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoid-associated protein chloroplastic
Sequence

ATGCCCGCCACGACCATCGTCCTCGCGTGTTTGGCCCGCGTCACGGCGTCAGGTCGCTCA
CTCCCGTCACTCCTTATCCCTTCCCATCGATCCCATGCCCTGTTGCCGCGCCCGCACCTC
CTTCCCCATCCGCGCCCGCCGCGGCTCCTCCGGCAGCTCCGCCACGCGCCCAACCGCAAC
CTGCCCGCACGGCCACCGCTGCCTGGTAGTATCTATCAAATCAGCCACCTGTCCTCTTTT
TCTTCAAATCAAGTCCGTTTCCCTTTCCTTTCTACCCTCTCCCTCGTCTCCGGCGGGCGG
TGGCCTCACCTCCCTCTCCCCGTCGCCCTGATGGCTCCCTCCACAGCTCTCGCTCCGGTG
GCCTTCCGCTCCGCCTTCTCGACGCCGCTCGCGTCGAAACCTACCCGTAATAGAATGAAC
ATAGAGGGCGCTTTCTGTTTGCCGTGTTCCACAAGGAAGAGAGCAAGTTATAGACCTTTC
CGAGTGTACAGTTTATTTGGAGGGAAGAAGGATAAAGATGAGAATGGTGATGAGGCGCCA
TCGAAAGCAGGAATTTTTGGAAATATGCAAAATCTCTATGAAACTGTTAAGAAGGCCCAA
ATGGTTGTCCAAGTTGAGGCTGTCCGGGTGCAAAAGGAGCTTGCAGCGACTGAGATTGAT
GGTTATTGTGAAGGCGAACTAATCAAGGTTACACTTTCTGGAAACCAGCAACCTATTAGA
GTTGAAATCACAGAAGCTGCGATGGAGTTGGGTGCTGAAAAACTTTCCGGGTTGGTCAAC
GATGCTTACAAGGATGCACACCAACGGAGCGTCCAGGCCATGAAAGAGAGGATGGCTGAC
TTGGCGCAGAGCCTGGGAATGCCTGCGGGCCTCGGCGATGGTCTCAAGTGA

Peptide Sequence

PEP ID

Zm00001d015505_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:94167247:94184406:1 gene:Zm00001d015505 transcript:Zm00001d015505_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoid-associated protein chloroplastic
Sequence

MPATTIVLACLARVTASGRSLPSLLIPSHRSHALLPRPHLLPHPRPPRLLRQLRHAPNRN
LPARPPLPGSIYQISHLSSFSSNQVRFPFLSTLSLVSGGRWPHLPLPVALMAPSTALAPV
AFRSAFSTPLASKPTRNRMNIEGAFCLPCSTRKRASYRPFRVYSLFGGKKDKDENGDEAP
SKAGIFGNMQNLYETVKKAQMVVQVEAVRVQKELAATEIDGYCEGELIKVTLSGNQQPIR
VEITEAAMELGAEKLSGLVNDAYKDAHQRSVQAMKERMADLAQSLGMPAGLGDGLK

Transcript Sequence

Transcript ID

Zm00001d015505_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:94167247:94184406:1 gene:Zm00001d015505 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleoid-associated protein chloroplastic
Sequence

ATCGCTCGGACCGCCCGATGCCCGCCACGACCATCGTCCTCGCGTGTTTGGCCCGCGTCA
CGGCGTCAGGTCGCTCACTCCCGTCACTCCTTATCCCTTCCCATCGATCCCATGCCCTGT
TGCCGCGCCCGCACCTCCTTCCCCATCCGCGCCCGCCGCGGCTCCTCCGGCAGCTCCGCC
ACGCGCCCAACCGCAACCTGCCCGCACGGCCACCGCTGCCTGGTAGTATCTATCAAATCA
GCCACCTGTCCTCTTTTTCTTCAAATCAAGTCCGTTTCCCTTTCCTTTCTACCCTCTCCC
TCGTCTCCGGCGGGCGGTGGCCTCACCTCCCTCTCCCCGTCGCCCTGATGGCTCCCTCCA
CAGCTCTCGCTCCGGTGGCCTTCCGCTCCGCCTTCTCGACGCCGCTCGCGTCGAAACCTA
CCCGTAATAGAATGAACATAGAGGGCGCTTTCTGTTTGCCGTGTTCCACAAGGAAGAGAG
CAAGTTATAGACCTTTCCGAGTGTACAGTTTATTTGGAGGGAAGAAGGATAAAGATGAGA
ATGGTGATGAGGCGCCATCGAAAGCAGGAATTTTTGGAAATATGCAAAATCTCTATGAAA
CTGTTAAGAAGGCCCAAATGGTTGTCCAAGTTGAGGCTGTCCGGGTGCAAAAGGAGCTTG
CAGCGACTGAGATTGATGGTTATTGTGAAGGCGAACTAATCAAGGTTACACTTTCTGGAA
ACCAGCAACCTATTAGAGTTGAAATCACAGAAGCTGCGATGGAGTTGGGTGCTGAAAAAC
TTTCCGGGTTGGTCAACGATGCTTACAAGGATGCACACCAACGGAGCGTCCAGGCCATGA
AAGAGAGGATGGCTGACTTGGCGCAGAGCCTGGGAATGCCTGCGGGCCTCGGCGATGGTC
TCAAGTGATGCCGCAATTCGGGAAAGCTTTCCAATAATCCTTTTTCCTCAATTTTGTATG
CTAGCCGTGTGAGTAGTAAGCATAACCCCTCCGCGACCTCTCATAAGAAGTGTACTTGTG
AGCACTTGTTTTCTTTCAGCTTTAGCTGCCATTTGCTGTTCTGCGCACGCAGATATTTGC
ACATTAACTTCACGTCTGGTCTACAAAGTTGCAAGATGCGGGCCATGATCTTTTGGGCAT
TTTTCCAACAAGTTGTTGGGCTGGCCCAGTTGTAGCCCTTCGAAGATGAGACAACCAAGC
CCATATATATAACACACACCGAAAGCCTTCAGAATCTGTCGTGTGTGACCAAGGATAAAT
CATGGCTTTGGTGAACAGTGATTTAACAGCAAATAAAACACTAAGTGGGTGTTCGGTTTG
AGG