Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015450_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:90962595:90968523:-1 gene:Zm00001d015450 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein1 description: SUN domain protein1
Sequence	ATGACAATGTCTGCTTCTACTGCTGCAATTCGTACTGCGAATACAAATGGAAACCATGCA GTAAGTTCGGATTCACATTCTAGCCAAGATGCTAGGCAGCGAACAGCTGGTATTACAAAA AGAAAAGCATTGCCTTCGATTCTTCAAAAAATTCCTAGCAATGATCTGAGTCATACTATC CGAGGAGAATCAGTTCTTCAAAAGTCAAATTATTCTTCTGAAGGAAGAAAAGATGTGGTT GCTTCAGCAACTGCTGAACGCCAAAACAAAAACACTACAAATGTGGTTGCTTCAGCAGCT GCTGTACGCCAAAAGAAAAGCCCTACTAAACAAGAAAACGCCAACTGGGTAACTGCCTTA AGTGTGCTGGTGAAGCTGTGTCTTCTTATTTCAGCTACTGCTTGGATGGGGCAGGTGTTC TGGAGATGGCAAAGTGGTGAATTATCATTTACAACACTGGATATGGAGAACAGGCTATCC AGGGTGGAAGGGTTCAAGAAGACAGCCAAGATGCTTCAGCTACAGTTGGATGTTTTGGAT AAAAAGCTAGAAAATGAGATTGACAAAGCAAAAGGGGTCATTGCTAAGCAATTTGAGGAT AAGGGTAATAAGATAGAGAAAAAGATGAAGATTTTGGAAGACAAAACTGACAAGTTGGAC AAGTCACTGGCTGAGCTTAGTGACATGGGATTTCTTTCTAAAAATGAGTTTGAGGAGATT TTGAGCCAGTTGAAGAAAAAGAAGGGATTCGGTGGTACAGATGATGAAATAAGCTTGGAT GATATAAGGCTATATGCCAAAGATGTGGTTGAGATGGAGATAGCAAGGCATTCCGCAGAT GGCCTTGGTATGGTGGATTATGCATTGGGATCTGGTGGTGCTAAAGTGGTAAGTCACTCA GAGCCTTTCATGAATGGCAAGAACTATTTACCTGGTCGCAGCAATGTGCACACAACAGCC CAAAAGATGCTGGAGCCAAGTTTTGGGCAGCCAGGAGAGTGTTTTGCAGTGAAAGGAAGT AGTGGGTTTGTGAAGGTGAAGCTAAGAACAGCAATAATTCCTGAAGCCGTCACTCTAGAA CATGTTGACAAGGTAAGGTTATTGTGCTATACACTAATATGTAGACGACTAAACAAGTAT CTATTGCTATTTATTTCAAACTTTTGTATCTAA

Peptide Sequence

PEP ID	Zm00001d015450_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:90962595:90968523:-1 gene:Zm00001d015450 transcript:Zm00001d015450_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein1 description: SUN domain protein1
Sequence	MTMSASTAAIRTANTNGNHAVSSDSHSSQDARQRTAGITKRKALPSILQKIPSNDLSHTI RGESVLQKSNYSSEGRKDVVASATAERQNKNTTNVVASAAAVRQKKSPTKQENANWVTAL SVLVKLCLLISATAWMGQVFWRWQSGELSFTTLDMENRLSRVEGFKKTAKMLQLQLDVLD KKLENEIDKAKGVIAKQFEDKGNKIEKKMKILEDKTDKLDKSLAELSDMGFLSKNEFEEI LSQLKKKKGFGGTDDEISLDDIRLYAKDVVEMEIARHSADGLGMVDYALGSGGAKVVSHS EPFMNGKNYLPGRSNVHTTAQKMLEPSFGQPGECFAVKGSSGFVKVKLRTAIIPEAVTLE HVDKVRLLCYTLICRRLNKYLLLFISNFCI

Transcript Sequence

Transcript ID	Zm00001d015450_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:90962595:90968523:-1 gene:Zm00001d015450 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUN domain protein1 description: SUN domain protein1
Sequence	ATCCGCATAGCACTGAGGGCGGCGGCCGCTTCCTCTCCTCCGCGGCCGAGGTCGCTCCCC CGCCCGCCGCCTCTTGCCCGCGGCCGATCTCTTCCCTCCGCTCGCAGCGTCGCAGCCCGT AACGAGACCGCGCTCGGTTGAGCACCACCTGGGGCCCAGCGCCCCAGCGTCCTCGTGACC ACCTCGGCGCGGCATCCGCCCTCTGCAGCCCCGGTGTCTCCGCGACCGGCTCCGGTGCGT CCGGAACGCAGCTCCACAGGAGCATCATTATTTATAGAATACGATCTACTTTATAGCTGA TGACAATGTCTGCTTCTACTGCTGCAATTCGTACTGCGAATACAAATGGAAACCATGCAG TAAGTTCGGATTCACATTCTAGCCAAGATGCTAGGCAGCGAACAGCTGGTATTACAAAAA GAAAAGCATTGCCTTCGATTCTTCAAAAAATTCCTAGCAATGATCTGAGTCATACTATCC GAGGAGAATCAGTTCTTCAAAAGTCAAATTATTCTTCTGAAGGAAGAAAAGATGTGGTTG CTTCAGCAACTGCTGAACGCCAAAACAAAAACACTACAAATGTGGTTGCTTCAGCAGCTG CTGTACGCCAAAAGAAAAGCCCTACTAAACAAGAAAACGCCAACTGGGTAACTGCCTTAA GTGTGCTGGTGAAGCTGTGTCTTCTTATTTCAGCTACTGCTTGGATGGGGCAGGTGTTCT GGAGATGGCAAAGTGGTGAATTATCATTTACAACACTGGATATGGAGAACAGGCTATCCA GGGTGGAAGGGTTCAAGAAGACAGCCAAGATGCTTCAGCTACAGTTGGATGTTTTGGATA AAAAGCTAGAAAATGAGATTGACAAAGCAAAAGGGGTCATTGCTAAGCAATTTGAGGATA AGGGTAATAAGATAGAGAAAAAGATGAAGATTTTGGAAGACAAAACTGACAAGTTGGACA AGTCACTGGCTGAGCTTAGTGACATGGGATTTCTTTCTAAAAATGAGTTTGAGGAGATTT TGAGCCAGTTGAAGAAAAAGAAGGGATTCGGTGGTACAGATGATGAAATAAGCTTGGATG ATATAAGGCTATATGCCAAAGATGTGGTTGAGATGGAGATAGCAAGGCATTCCGCAGATG GCCTTGGTATGGTGGATTATGCATTGGGATCTGGTGGTGCTAAAGTGGTAAGTCACTCAG AGCCTTTCATGAATGGCAAGAACTATTTACCTGGTCGCAGCAATGTGCACACAACAGCCC AAAAGATGCTGGAGCCAAGTTTTGGGCAGCCAGGAGAGTGTTTTGCAGTGAAAGGAAGTA GTGGGTTTGTGAAGGTGAAGCTAAGAACAGCAATAATTCCTGAAGCCGTCACTCTAGAAC ATGTTGACAAGGTAAGGTTATTGTGCTATACACTAATATGTAGACGACTAAACAAGTATC TATTGCTATTTATTTCAAACTTTTGTATCTAACTAATTTATATAATTGAATCATTAGGTA TTTTCATCTCAAAATGTTCTTGTAGCAAACATATATCCCACCGAAGTCGGTGTGTAGGAT TTTTTTTTCTAAAGACGCAGAAGTGCTCCGTATCATTTCATTAAGGAAAAAGTACAAACA ACATAGAGGGGCCAAGGGCCAGCACCGAAAACTCCCAATTACAGCCGCGCCAGGCACACA CTAGGGAAACGACCAAAAAAAGAAGCAACATACTTAGGTGCTCAGCCCCCACTATCCTGG GCCTGGCGTGCAGTATGCTAAGCACCGAATTGCCAGCTAGGCACCACAGGTTGCACTCTT TCTCTATTTCATGGCTAACCACAGAAACACTAGATCTCATCCCCTCAAACACACAAGCGT TCCTGTGCTCCCAAAGCTCCCAGTCAACAAGAATGATCATAGAGTTGAGACCCTTCTTAA GCTCCCTAGTCACTTGACTGACTGCCCCGGACCACCAGCCTGAAAATCTCCTAACATCAG GCTGCGGTGCAAGAGCAGGCAAACCCAGGGCAAAAAAGAAATAATGCCCAAACTTCACAA GAGAAGACACAGGAGACTAGAAGGTGTTGCATCGTCTCTTGCTCATGGTCACAAAAGGGG CAGACCATGGGGTGTGGAAGCCCTCATGTAGCCAATCGATCCGTCGTCCAGCATCTATTC TTTATGGCCAACCAAATGAAGATTTTGCACCGGAGAGGGGCCCATGCATTCCAAATCCTA TTCCAGGGTCCGAACTTAATGGTCCCCAAGAAAAATGCTTTATATGCAGACTTACACATA TACAGCCGAATTCAGTGAACCTTCAAATGAACTGGTCCGAAACACCTGGCTGCAGGAGTG CAGGGTCACACCGTCAACCATCTCCCAAATCTTCAAGTATTCGACTAGCACTTGGACTGT GAGAGCCCCTCGGATACCTTTTACCCACCTTCTGTTGGCCAAAGCTTGAGCTACAGTGCA CTGCTTTCTAGCTTTCTTGGGAACCACCAAAACCAGATTAGGAGCCAATTCGGCAAATGA ACTACTATTCGGCCACCGATCTGTCCAGAACAAACTGTCCTCACCATTCCCAACCTTGAT TTGCACGGCTTCTGAAAAAAAGGCTTGAGCGTTTCTTGGAACCTGAATAGGAAGGCTCTC CCATGGGTGTGCAGAATCTTTTTTTGTAGCCACAACCAACACATGCGCAGAGTGCCAGAG CCCACCCCATAGCTTCAAGATTGAGAATTCCAAGACCACCATATGCAGCAGTCTATGAAC GTTTTCCCAAGCGACGGGACAATTACCTCCATTTGCCTTTTTTGACCTGTCCACAGAAAA GCCCTCCGACATTTATCAATTGCTTAGATCACCCATTTCGGCGGATCCAGAGCAGTCATA AGATGTATGGGGATTGCAGAAAAAACAGTCCGGACAACCACCAGGTGCCCTGCGCGGTTG AGGAGGGAAGCTTTCCACTTGGGAAGGCAATCAGCCACCTTATCCACCAACGGCAGCAGG TCAGCCTTAGATGGCTTTCTAATTGTGAGTGGAATTCCAAGATAAACACAAGGGAAAACA CTGATTTCGCAAGCCATCACCTCCTTTAGGACGGTCAGGTCAGCTTCTGAACAATGGATC GGACTCACTGAGCATTTAGCTAAATTGGTTCTGAGACCTGAAGCATGCCCACAAGCGTCC AACAGCTGAGATATGAGGGAGAGATCATTTCGATTGTGCCTGAGAAACATAATCACATCA TCCGCAGGAAACATAAATCCCACAATAGCGTTATCTGGACACGGGTGCGGGTGTCGGATT TTGACTTGGGTGCAGGTGTCGGATTTGGTGATTGTTTAATGTACTATTTTTAAAATTATA CAAAATAAAAATCTGAACATAATATACTTTATGAACAATTTTATTAGTGTACATTTATGT CATATTACATAATTATCCATATATGACCGCTCCAGAAGCACACACATTACAGGTTTAAAA AGGGAGAAAATAATGGGGAAAAACAAAAAGGAAAGCAAACAAAGGAACTAATGAAGCCAT TTACTGGCCAATTCCACGGGACCTAAATGTCTTGCCCTAACCCATCCAACTCCCGAGTCC TTACTGCTTCCCCTTCCTCAATTCCTCCTCACTGCTTCTCACTCCCTCAAGAAAAGACAC GTTGCTGCAGCCAGAGAACCCACCACTCAGCCACCATATCCTGTCATGGATTAGCAAATC AGTACTCCACCCCAAATCCTCCTCATCTCTCCAGTAGCATCAATTTTGACATGGCCTGCA TCTGCAGGTATGGCTGATGCTCAGAAGGCACGGCTACTCCCTTGGCCCTCTGTCTCTGAC AATGCTGGATGTTTCTTCCTGCCCTCTCCTTACATCCTATTCTGTGCTGGATCGCTCCAT ATCCTTGAAGGTGACCGACCTTTTTTTTGGAACATCTGCAAGGCGTACTATGCGTGTTGC ACTGTGTTTGTTGCAATTGACACAGATGTGATTGGCTTGCCAAAAAAAAAAAATCAGATA CAGACGTCTCTGTAACACTGGCCATAAGGCAACTGGCCTTTTTTATCAGCTGAGCTAATT TAATTCCCTTTGTCAGTAAGTTTAGGAAACAGGTAGTCAATATGTGCTCACTTCTAATAT AATCCACAAGGCTAGAACTTAGAAGCATAGGTGTGGTTTCCAGCACAAATATATTTATTT CCGATTTGGTGATCTACATTTTGTTTGCTTTGGTGCGGGTTAATCTGAATAGTTTGAGAG ATGGAACTGACAATCTGACATATCATTTGGAGGTCATTCTGTTTTGTCAGGCACTTATCA ACTGGAAAGGAACTCATGTGAATCCTGAATTTGTTATTAGTTGTTATTAGGTTAGGTCTG ACTTATGAATCTGATCTGATCATCAAGAGCATACTGATTGGCGACATCAAGTATGCTGCT TATGCTATCTCACATGACTTGATTTGGGGAATTTCAATAACTCTGTTCCTCTAATTGGGC ACTCAATTATGCTAGTATTATCACGAAACATGTCACATAAAGTGATGAATGGTAACTTGA TTACTGAATTTGGTTATGCCAATGTCCTGATGTACTGTCACAAACCCTATCCTTACTATC ACATGATCCAATTCGCCAAACTCTTGAGCTTGTGTATCTTTGTTGAGTGAGATATCGTAG AATTAATTATTGATATTATATATATCTTTCCTTGGGTCAGAGCTAGGTGGACGTTATTTT CTTGATACAGCCATTCCAATTTATTCCTACTAACTCACGAATATCATAACCTGTGCAGAG TGTGGCCTATGATAGATCAAGTGCTCCAAAGGATTTCCAGGTCCGTGGATGGTACCAAGG ACCACATGATGATTCAGAAAAGGATTCAAATGTGATGTCTACTTTAGGAGAGTTCTCTTA TGACCTTGACAAGAGCAATGCTCAGACCTTCCAACTAGAGAGAACCGCTCAATCACGTGT TGTCAACATGGTTCAGCTTGATATCTCCTCAAACCATGGGAACTTGGAACTTACATGCAT CTATCGCTTCAGGGTGCATGGCAGAAAGCCCGTCTCCCCCAGCACTGGAGGATGAAGCCC TGAGCTGTGACATGCGTGCCAAAGCGCGACAACATTCTTGCAGCATTTCTGCCTATAGGA GCTTTGGTTCAGCGGTTAGCGGTTAGTCGGAGCATTTCAGCCAGCGCCGCTGCACCAGTG TTGATAATGTTGATTCTATTCTCGCACATTGTTGTGAACAGCTCGGAAATACCTTGCGAG GTTTCCTTAAGCTGTTCCTAGTTTGGCATCAAGTTCGCCTGTTTTCTCTGCTCCTCCTCC CCTCCTGTTAAGACTGCAGCTTAGTATTCCGTTTGAAATTGGTCGTCTCATTT