Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015433_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:89796563:89800151:-1 gene:Zm00001d015433 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	ATGGACTCTCTCCTCGCCACCTACGCCTCTTCTGACGACGACGCTGACTCCGACGAGGCC CCGTCCACCGCCCCCGCCGCCTCCTCCGGTGGCCGCGCCGGCGGACTCTTCTCGCTCCCG CAGCCCAAGTCAGCCCCCGCCCTGCTCTTCTCCTCCCTCCCGGCGCCCAAATCCACCCCC GAGCCGCTCTTCTCCTCTCTCTCGGCGCCCAAATCCGCCAACGCCCCCACCTTCTCCTCC ATCCCGGCGCCCAAGACTTCCGGAGGAAACCCTAAGCGCGTCGTCCAGTACCGCCCGCAG CCGATCCTGCAGTCCGCAGGCGACAGCTCCGACGACGACGAGGACGACGCCAAGAAGCGC CGCGCCAGCAACAACGAGGCGAGCTTGCCGCACGTGTCTGCTGGCTTGGGGCCCGTGTCC TCGTTCCTCCCGCCGCCGAAGCACTCGCTCGGGCTCGGCTCCGGCTCTGGCGCTGGAGCC AGGAGGTCGGCAATCGATACGGCTGCGCCGGAGAAGCCAAATCTCAGCAACGCCGTGCCT TCAAGCTCGGTTACCAATACAGGAGCCCCGGAAAGGCCCAGCACTGGCGCGTCCGATGAC GACGATTCGGAGGATAGCGGCAGTGAGGGCGACATGCCTGCGCCAGAGCTGGAGGAGGAA CATCAGGAGCAGCCGAGTTTTAATGCTGCAGCTGCAGAGCAGCAGCAAGGCCATGATGCT GGAGCTGGGAGCACTAGTGGATATGGAACCTATGCATGGGATCCAAACTACTATGCCCAA TACGGTGCGAATTATGGCTGGGATCCTAGTGCCAGTGCAAGTTATGAGGATGGAACACAG TATGCCGCATATGAAGAAGGCCAAAGTGGAGGGTATGCTCATTCGCACGGAGGAGAGCAT GGCAGTGGATACGAGCATGTTGCGGCAGTGCCATATGGGGTAGATTATACTGGAGGGTAT GGTCATGAGGTAGCAGCAACGGCGTTGCCACCGGTGCAAGAACCAGTACTGCCACCAGAG ATGGGTAGGATTGGAGGGAAGAGAGGTAGGAATGATATGCCGGCCCAGATTTTAGAGGTA AATCAAGCAGAGCTGATGAAGAACAGACCGAAGCAGGATAAGTCCAAGCTCACTGGGCTG GCCTTTGGTCCTAGTTATCAGCCTGCCCCTTCAGCAAAAGGAAAGCCATCGAAGTTGCAT AAAAGGAAACACCAGATTGGTTCTCTGTACTTCGACATGAAGTCGAAGGAGATGGAGCTT GCAGAGAGGCGCTCCAAAGGCATCCTTACGAAAGCAGAAACTCAAGCAAAATATGGCTGG TGA

Peptide Sequence

PEP ID	Zm00001d015433_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:89796563:89800151:-1 gene:Zm00001d015433 transcript:Zm00001d015433_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	MDSLLATYASSDDDADSDEAPSTAPAASSGGRAGGLFSLPQPKSAPALLFSSLPAPKSTP EPLFSSLSAPKSANAPTFSSIPAPKTSGGNPKRVVQYRPQPILQSAGDSSDDDEDDAKKR RASNNEASLPHVSAGLGPVSSFLPPPKHSLGLGSGSGAGARRSAIDTAAPEKPNLSNAVP SSSVTNTGAPERPSTGASDDDDSEDSGSEGDMPAPELEEEHQEQPSFNAAAAEQQQGHDA GAGSTSGYGTYAWDPNYYAQYGANYGWDPSASASYEDGTQYAAYEEGQSGGYAHSHGGEH GSGYEHVAAVPYGVDYTGGYGHEVAATALPPVQEPVLPPEMGRIGGKRGRNDMPAQILEV NQAELMKNRPKQDKSKLTGLAFGPSYQPAPSAKGKPSKLHKRKHQIGSLYFDMKSKEMEL AERRSKGILTKAETQAKYGW

Transcript Sequence

Transcript ID	Zm00001d015433_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:89796563:89800151:-1 gene:Zm00001d015433 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 /.../e: NCBI BLink).
Sequence	AAGAGAAAAAAACGAATAAATATTGGCACCGTTTTCATCTCTAGCGCGCGTCGCCGGCTT CTACGTTTCTTCTCCGGCGACCGAAGCCACCGCCCCAGCCTCGCCATGGACTCTCTCCTC GCCACCTACGCCTCTTCTGACGACGACGCTGACTCCGACGAGGCCCCGTCCACCGCCCCC GCCGCCTCCTCCGGTGGCCGCGCCGGCGGACTCTTCTCGCTCCCGCAGCCCAAGTCAGCC CCCGCCCTGCTCTTCTCCTCCCTCCCGGCGCCCAAATCCACCCCCGAGCCGCTCTTCTCC TCTCTCTCGGCGCCCAAATCCGCCAACGCCCCCACCTTCTCCTCCATCCCGGCGCCCAAG ACTTCCGGAGGAAACCCTAAGCGCGTCGTCCAGTACCGCCCGCAGCCGATCCTGCAGTCC GCAGGCGACAGCTCCGACGACGACGAGGACGACGCCAAGAAGCGCCGCGCCAGCAACAAC GAGGCGAGCTTGCCGCACGTGTCTGCTGGCTTGGGGCCCGTGTCCTCGTTCCTCCCGCCG CCGAAGCACTCGCTCGGGCTCGGCTCCGGCTCTGGCGCTGGAGCCAGGAGGTCGGCAATC GATACGGCTGCGCCGGAGAAGCCAAATCTCAGCAACGCCGTGCCTTCAAGCTCGGTTACC AATACAGGAGCCCCGGAAAGGCCCAGCACTGGCGCGTCCGATGACGACGATTCGGAGGAT AGCGGCAGTGAGGGCGACATGCCTGCGCCAGAGCTGGAGGAGGAACATCAGGAGCAGCCG AGTTTTAATGCTGCAGCTGCAGAGCAGCAGCAAGGCCATGATGCTGGAGCTGGGAGCACT AGTGGATATGGAACCTATGCATGGGATCCAAACTACTATGCCCAATACGGTGCGAATTAT GGCTGGGATCCTAGTGCCAGTGCAAGTTATGAGGATGGAACACAGTATGCCGCATATGAA GAAGGCCAAAGTGGAGGGTATGCTCATTCGCACGGAGGAGAGCATGGCAGTGGATACGAG CATGTTGCGGCAGTGCCATATGGGGTAGATTATACTGGAGGGTATGGTCATGAGGTAGCA GCAACGGCGTTGCCACCGGTGCAAGAACCAGTACTGCCACCAGAGATGGGTAGGATTGGA GGGAAGAGAGGTAGGAATGATATGCCGGCCCAGATTTTAGAGGTAAATCAAGCAGAGCTG ATGAAGAACAGACCGAAGCAGGATAAGTCCAAGCTCACTGGGCTGGCCTTTGGTCCTAGT TATCAGCCTGCCCCTTCAGCAAAAGGAAAGCCATCGAAGTTGCATAAAAGGAAACACCAG ATTGGTTCTCTGTACTTCGACATGAAGTCGAAGGAGATGGAGCTTGCAGAGAGGCGCTCC AAAGGCATCCTTACGAAAGCAGAAACTCAAGCAAAATATGGCTGGTGAGCATGTAAGAAA AACTCAGGATACCTATATGGGATCTGTTGAATTGAATTGGCCGAGGTTTTGTTGCAACTG TTATGGACTTTGTAAACCCAATGCAGAACAGATAGTTCGATGATCAGTCGATTAATGAGC CAACACTTGTGTTAACCCAGCTTTCCTTTTTTCTACTTCTACTCTCAACTTGTATTGTGA TGTTGGTATGAATAGTAGTAAAAGAATGCTGGTAGTGTACTAGTATGTCACTGTCCATCC CAATGGCGATAGGAAGTGTTGTAAAAAAACTGAAGAGGCCAGTGTTATAAAAAAACGCGG AAATGCTGCG