Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015383_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:5:87519339:87522722:1 gene:Zm00001d015383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic

Sequence

ATGGCCTATATGTTCAAGTATGATTCCACTCATGGCCCGTTTAAAGGTTCTATTCGTGTC
GTGGATGATTCAACCCTCGAGATCAATGGGAAGAAGGTCACAATTACAAGCAAAAGAGAT
CCTGCAGAGATTCCATGGGGTAACTTTGGGGCTGAATATGTTGTTGAATCTTCTGGTGTC
TTCACGACGACTGATAAAGCATCAGCACACTTAAAGGGTGGTGCAAAGAAAGTGGTGATA
TCTGCACCATCAGCTGATGCTCCCATGTTTGTAGTTGGAGTTAATGAGAATAGCTATGAT
CCAAAGATGAATGTTGTTTCTAATGCAAGTTGCACTACCAACTGCCTTGCTCCACTTGCC
AAGGTTGTCCATGAGGAATTTGGCATCGTGGAGGGCCTTATGACAACTGTTCATGCAACA
ACAGCTACCCAGAAGACCGTCGATGGTCCTTCGATGAAGGATTGGAGAGGAGGACGTGGT
GCTGCCCAAAACATAATTCCCAGCTCCACTGGTGCAGCAAAGGCTGTTGGAAAAGTCCTG
CCTGAGCTGAATGGAAAACTCACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTCTCT
GTTGTGGATTTGACATGCCGGATTGAGAAAAGCGCCTCCTATGATGATGTGAAAGCAGCC
ATCAAGACGGCATCAGAGGGTGCACTCAAAGGTATTCTTGGCTACACAGACGAGGATGTT
GTTTCCAATGATTTTGTTGGTGATTCAAGGTCAAGCATCTTTGATGCCAAGGCTGGTATT
GGACTGAGCTCTTCCTTCATGAAGCTCGTGTCTTGGTATGACAACGAGTGGGGCTACAGC
AACCGGGTTCTGGATCTGATCGCTCACATGGCTCTTGTGAGCGCCAAGCACTGA

Peptide Sequence

PEP ID

Zm00001d015383_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:5:87519339:87522722:1 gene:Zm00001d015383 transcript:Zm00001d015383_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic

Sequence

MAYMFKYDSTHGPFKGSIRVVDDSTLEINGKKVTITSKRDPAEIPWGNFGAEYVVESSGV
FTTTDKASAHLKGGAKKVVISAPSADAPMFVVGVNENSYDPKMNVVSNASCTTNCLAPLA
KVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVL
PELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKTASEGALKGILGYTDEDV
VSNDFVGDSRSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVSAKH

Transcript Sequence

Transcript ID

Zm00001d015383_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:87519339:87522722:1 gene:Zm00001d015383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glyceraldehyde-3-phosphate dehydrogenase%2C cytosolic

Sequence

GGGTTTGGGCGGATTGGCAGGTTGGTCCTGCGAATTGCAACCAGCAGAGATGATATTGAA
GTTGTGGCTGTGAATGACCCTTTCATTGATGCTAAGTACATGGCCTATATGTTCAAGTAT
GATTCCACTCATGGCCCGTTTAAAGGTTCTATTCGTGTCGTGGATGATTCAACCCTCGAG
ATCAATGGGAAGAAGGTCACAATTACAAGCAAAAGAGATCCTGCAGAGATTCCATGGGGT
AACTTTGGGGCTGAATATGTTGTTGAATCTTCTGGTGTCTTCACGACGACTGATAAAGCA
TCAGCACACTTAAAGGGTGGTGCAAAGAAAGTGGTGATATCTGCACCATCAGCTGATGCT
CCCATGTTTGTAGTTGGAGTTAATGAGAATAGCTATGATCCAAAGATGAATGTTGTTTCT
AATGCAAGTTGCACTACCAACTGCCTTGCTCCACTTGCCAAGGTTGTCCATGAGGAATTT
GGCATCGTGGAGGGCCTTATGACAACTGTTCATGCAACAACAGCTACCCAGAAGACCGTC
GATGGTCCTTCGATGAAGGATTGGAGAGGAGGACGTGGTGCTGCCCAAAACATAATTCCC
AGCTCCACTGGTGCAGCAAAGGCTGTTGGAAAAGTCCTGCCTGAGCTGAATGGAAAACTC
ACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTCTCTGTTGTGGATTTGACATGCCGG
ATTGAGAAAAGCGCCTCCTATGATGATGTGAAAGCAGCCATCAAGACGGCATCAGAGGGT
GCACTCAAAGGTATTCTTGGCTACACAGACGAGGATGTTGTTTCCAATGATTTTGTTGGT
GATTCAAGGTCAAGCATCTTTGATGCCAAGGCTGGTATTGGACTGAGCTCTTCCTTCATG
AAGCTCGTGTCTTGGTATGACAACGAGTGGGGCTACAGCAACCGGGTTCTGGATCTGATC
GCTCACATGGCTCTTGTGAGCGCCAAGCACTGATGTTCGTACTCGTTCCTCCAGTACCAG
TAGTAGCCTAGATAAGAGGCTGCAGTTTTGACGGCCATTTTCTTTTAGCTGTTGTTTGGA
ATAAAAGACCAAATGTTGGAACACTTGGAACTCGCGCAAAACTGGAATCCGATTCATGAC
CTGTGTTTTAGTTGTAGAGGGGGCAAATTTGCATCGTACTATATGCGGGATTGTTGATCG
GATGTCGTATGGT