Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015377_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:5:87068335:87070960:1 gene:Zm00001d015377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCGCAGGATGTGCTAGAACTCGTGCAGACGAGGGGGACCGACGCCGCCAGCGTCTGG GAGTCACTGGACAAGATCCCTCAAGCACACGATCTTTGGGACGACATCGTCAACGTCGCC GTCCAGCTCCGCCTGAACCGGCAATGGGAGCCGATCATCACAGTCTGCGAGTGGGTCCTG CGCCGGAGCTCGTTCCGCCCCGACATCATCTGCTACAACCTGCTCATCGACGCGTACGGC CAGAAGCGTCAGCTGAGCGAGGCGGAGGCGGCCTACATGGCGCTTCTGGAGGCTCGCTGC GTGCCTACGGAGGACACCTACGCTCTGCTGCTGCGCGCGTACTGCGGCTCCGGGCAGCTG CACCGAGCCGAGGGCGTGATTTCGGAGATGCAGAGGAACGGGATCCCTCCCACTGCGACT GTGTACAACGCGTACCTGGACGGTCTGCTGAAAGCGAGGTGTTCGGAGAAGGCGGTTGAA GTGTACCAGAGGATGAAGAAGGAGCGCTGCAGAACTAACACCGAGACCTACACCCTGATG ATCAACGTGTATGGGAAAGCAAATCAGCCGATGTCGTCGTTGAGAGTGTTCAGGGAGATG AAATCGGTCGGGTGCAAGCCCAACATCTGCACCTACACGGCGCTGGTGAACGCGTTCGCG CGGGAAGGCCTGTGCGAGAAGGCAGAGGAGGTGTTCGAGGAGATGCAGCAGGCTGGGCAC GAACCTGACGTGTACGCCTACAATGCTCTGATGGAAGCTTACAGCCGCGCAGGGCTGCCG CAAGGGGCGTCGGAGATCTTCTCTTTGATGGAACACATGGGGTGCGAGCCTGATAGAGCC TCTTACAACATACTGGTGGATGCTTTCGGACGAGCTGGTCTTCACCAAGAGGCGGAAGCA GCGTTCCAAGAGCTGAAGCAGCAGGGCATGCGGCCGACGATGAAGTCGCACATGCTGCTC CTGTCGGCGCACGCCAGGTCCGGCAACGTGGCGAGGTGCGAGGAGGTGATGGCGCAGCTG CACAAGTCCGGGCTGCGCCCGGACACCTTCGCGCTCAACGCCATGCTCAACGCGTACGGC CGGGCCGGGCGGCTGGACGACATGGAGCGGCTCTTCGCGGCCATGGAGCGCGGCGACGGC GCGATCGCCGGCGCCCCGGACACCAGCACGTACAACGTGATGGTGAACGCGTACGGGCGC GCGGGGTACCTGGACCGGATGGAGGCGGCGTTCCGCTCCCTGGCGGCGCGGGGCCTCGCC GCCGACGTGGTGACGTGGACGTCCCGCATCGGCGCGTACGCCAGGAAGAAGGAGTACGGG CAGTGCCTGCGGGTCTTCGAGGAGATGGTGGACGCCGGGTGCTACCCGGACGCCGGCACC GCCAAGGTGCTGCTCGCCGCGTGCTCCGACGAGCGCCAGGTGGAGCAGGTCAAGGCCATT GTCAGGTCCATGCACAAGGACGCCAAGACGCTCTTCGCATTGTGA

Peptide Sequence

PEP ID	Zm00001d015377_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:5:87068335:87070960:1 gene:Zm00001d015377 transcript:Zm00001d015377_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MAQDVLELVQTRGTDAASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVL RRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQL HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM INVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEA AFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYG RAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLA ADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAI VRSMHKDAKTLFAL

Transcript Sequence

Transcript ID	Zm00001d015377_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:87068335:87070960:1 gene:Zm00001d015377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	CCGGAAGAAAATATCCAGAAAGAGGGGTACGGGGGTGCTATCAAAGGGCGTGGATGGAAG TACGGCTCCGGGTTCGTCGACGGAGTGTTCCCAGTGCTGAGTCCGATGGCGCAGGATGTG CTAGAACTCGTGCAGACGAGGGGGACCGACGCCGCCAGCGTCTGGGAGTCACTGGACAAG ATCCCTCAAGCACACGATCTTTGGGACGACATCGTCAACGTCGCCGTCCAGCTCCGCCTG AACCGGCAATGGGAGCCGATCATCACAGTCTGCGAGTGGGTCCTGCGCCGGAGCTCGTTC CGCCCCGACATCATCTGCTACAACCTGCTCATCGACGCGTACGGCCAGAAGCGTCAGCTG AGCGAGGCGGAGGCGGCCTACATGGCGCTTCTGGAGGCTCGCTGCGTGCCTACGGAGGAC ACCTACGCTCTGCTGCTGCGCGCGTACTGCGGCTCCGGGCAGCTGCACCGAGCCGAGGGC GTGATTTCGGAGATGCAGAGGAACGGGATCCCTCCCACTGCGACTGTGTACAACGCGTAC CTGGACGGTCTGCTGAAAGCGAGGTGTTCGGAGAAGGCGGTTGAAGTGTACCAGAGGATG AAGAAGGAGCGCTGCAGAACTAACACCGAGACCTACACCCTGATGATCAACGTGTATGGG AAAGCAAATCAGCCGATGTCGTCGTTGAGAGTGTTCAGGGAGATGAAATCGGTCGGGTGC AAGCCCAACATCTGCACCTACACGGCGCTGGTGAACGCGTTCGCGCGGGAAGGCCTGTGC GAGAAGGCAGAGGAGGTGTTCGAGGAGATGCAGCAGGCTGGGCACGAACCTGACGTGTAC GCCTACAATGCTCTGATGGAAGCTTACAGCCGCGCAGGGCTGCCGCAAGGGGCGTCGGAG ATCTTCTCTTTGATGGAACACATGGGGTGCGAGCCTGATAGAGCCTCTTACAACATACTG GTGGATGCTTTCGGACGAGCTGGTCTTCACCAAGAGGCGGAAGCAGCGTTCCAAGAGCTG AAGCAGCAGGGCATGCGGCCGACGATGAAGTCGCACATGCTGCTCCTGTCGGCGCACGCC AGGTCCGGCAACGTGGCGAGGTGCGAGGAGGTGATGGCGCAGCTGCACAAGTCCGGGCTG CGCCCGGACACCTTCGCGCTCAACGCCATGCTCAACGCGTACGGCCGGGCCGGGCGGCTG GACGACATGGAGCGGCTCTTCGCGGCCATGGAGCGCGGCGACGGCGCGATCGCCGGCGCC CCGGACACCAGCACGTACAACGTGATGGTGAACGCGTACGGGCGCGCGGGGTACCTGGAC CGGATGGAGGCGGCGTTCCGCTCCCTGGCGGCGCGGGGCCTCGCCGCCGACGTGGTGACG TGGACGTCCCGCATCGGCGCGTACGCCAGGAAGAAGGAGTACGGGCAGTGCCTGCGGGTC TTCGAGGAGATGGTGGACGCCGGGTGCTACCCGGACGCCGGCACCGCCAAGGTGCTGCTC GCCGCGTGCTCCGACGAGCGCCAGGTGGAGCAGGTCAAGGCCATTGTCAGGTCCATGCAC AAGGACGCCAAGACGCTCTTCGCATTGTGAAATCCGCGCAGGCTAAATTCCGATCCTGCT GCGTGATCACATACGAACCTTGACGAGAGTCACCTAGCTTGCATACTGGTTAACAAGTCA CAAGGCCCCGTTTGGTTACATATAGAATAATCTACTTTTTAGTCCCGTTTAGTACTTAAT TGTATTTAGTCTCTAGCCCTTCACTGTAAGGGCCTCACATCACATGGGTGCTAAAGGGGA CGAAAGGACATCATTTACTCTAATTACCATTGCATAGAGAATATGCACCGTATACATGCA ATAAAAAGAGAGGCATTTCAGTCTGTGTAC