Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d015364_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:5:86325771:86329361:-1 gene:Zm00001d015364 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine-type peptidase

Sequence

ATGTTGTGCTTTCTCTTGTTGCAGTTTCGAGCTCTGGCAGACCAGATATTCCGCAATCCT
GACTATCACAAACATGTGAGGAAGGCGGTAGTGAAGCAGCTGAAGGAGTTCAGGAAACAC
TATGAAGGTTATGTGCCAATGGAATATAAGGTTTACTTGAAGAAAATGAAAAGGTCTGGG
GAATGGGGTGATCATGTGACCTTACAGGCAGCTGCAGACAGGTTTGCTGCTAAAATATGT
CTGTTGACATCGTTTAGAGACACATGCCTAGTTGAGATAGTCCCCAGAGATGCCACTCCA
ACAAGAGAGCTTTGGCTAAGTTTCTGGTGTGAAGTACACTACAATTCATTGTATGCAGTT
GAAGATCTTCCAACACGGAAAACTAAGAAGAAGCATTGGCTGTTCTAG

Peptide Sequence

PEP ID

Zm00001d015364_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:5:86325771:86329361:-1 gene:Zm00001d015364 transcript:Zm00001d015364_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine-type peptidase

Sequence

MLCFLLLQFRALADQIFRNPDYHKHVRKAVVKQLKEFRKHYEGYVPMEYKVYLKKMKRSG
EWGDHVTLQAAADRFAAKICLLTSFRDTCLVEIVPRDATPTRELWLSFWCEVHYNSLYAV
EDLPTRKTKKKHWLF

Transcript Sequence

Transcript ID

Zm00001d015364_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:86325771:86329361:-1 gene:Zm00001d015364 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cysteine-type peptidase

Sequence

ACGGAGACTTGCCTTCCTTTTGGTGCGGAAAAAGAAAGAGAGGAGAAGCGAAGGAGGTTC
TCAGTTGGAGCGGCTCCCTCTCCCCGCGCGCGCCACCGCCTCCGATCCGAGCAGCCGCCT
ACAGTCAACCCATTCAACCTCAAATGTTCCTTGTGAGGTATCATGACAGAACAGCAGGAA
GGTGTTAGCAAGAGCTCTTCCTCAAGTATTAGCAGCAGCACTCAGGAGAGTGAGGAGGAA
CTGACCATCGGTACCCTTATAACCGAAGCAACAAACACAACAAACAGTGCCAAGAGTCTT
GGAAAGCGCCTTTCACACTTAGATTCGATCCCGCACACTCCACGTGTTAATGGGAAAATT
CCAGATTTTAATAATGCGACAATTGATCATGAATCATTATTAGAAAGATTAGGCACTTAT
GGCTTAGCTGAATATCAAATAGAAGGAGATGGGAATTGCCAGGTTAGCTTTTTGTATCAT
GTACAGAATTACCTTTTCATTTGTATGAAGTAAATTTATCGAGATATATTATTATTACTC
TACATCAATAATCTGGTTCTCTGTAGATTAATTGATTTGTGTTATGCTTGTCATCCATTT
GTATCGATAGACTTAATAGGTCGTCGGGAGGGGGAGTACTATTGCTTCAATCCATCTTCT
ACTTAGTTGGTAGTAATTTACTATATCTTCTTCTTGCTAAGAGCAAATCTGATTACGATA
TTTAGGTTCATTGACGAGGTGGCTTTGTTGTCTTTTACGCTTTCTCCATGTTGTGCTTTC
TCTTGTTGCAGTTTCGAGCTCTGGCAGACCAGATATTCCGCAATCCTGACTATCACAAAC
ATGTGAGGAAGGCGGTAGTGAAGCAGCTGAAGGAGTTCAGGAAACACTATGAAGGTTATG
TGCCAATGGAATATAAGGTTTACTTGAAGAAAATGAAAAGGTCTGGGGAATGGGGTGATC
ATGTGACCTTACAGGCAGCTGCAGACAGGTTTGCTGCTAAAATATGTCTGTTGACATCGT
TTAGAGACACATGCCTAGTTGAGATAGTCCCCAGAGATGCCACTCCAACAAGAGAGCTTT
GGCTAAGTTTCTGGTGTGAAGTACACTACAATTCATTGTATGCAGTTGAAGATCTTCCAA
CACGGAAAACTAAGAAGAAGCATTGGCTGTTCTAGCTCGCCAGGCTTTGGTGATTTCTTG
GTATGCTATTGGTCTTCTCTTTGTAGTCCAGCAGCATCTGTAAGCCTGCTTAGTTATGCC
TTTGTTTGTTGTAAGTTGTAACTTGACCTGGAATCAAATTCATTTAAGATCATGCAAAAT
ACAGTGAGCTCTTGCTTCGTCCTTGGC