Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015361_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:86285396:86289986:1 gene:Zm00001d015361 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence	ATGATGTTGCCGCCGCCGCCACCACCGTCCTCCTTGCGCGACCTTCTCTCGCGGGAGCGC GTCGACGAGGACGAGGCGCCGCATCTGTCGCCGCGACGCGCCTCCGGGCGGTCACCCCCG CGCCGCGGGGCGTCGTCGAGGTCGTCCAGGCACACGTCGTCGCCGCCGCTGGCCACGACC ACGACAACGACCAGGGAGGCGGAGGGGGAGGCCGCCGCCGCCGACGCGGTGGTCGCCGTG CTGTCCGCGTACGCCGGGAGGCTGCTCAGGGACGCGGAATTCAGGCGGGCGCTCCGCGAC AAGTGCGCCGCGTGCCTCGCGCCCGCCGCGGGCGCGGGCGAGGACGACGACGCGGCGGCA GGCCGCCCCGTGCTGGCCAACCTCGAGCTGGGCATCGAGAGCATAGAGCGCCTGGCCGCG GACGGCTCCGCCGCGCAGCCACAGGCGCCGCGCGACGCCAAGATCCGGTCGCTCCGCAAC TCCATCCGCCTCCTCAGCGTCGTCGCGTCGCTCCACTCGCCACCGCCGCCGCCGCGCCCC GGCGCCGCCGCGGGGGACGGCGGCGGCCGCACCTGCGGGGTGCCCAACTCGCACCTCGCA GCCTGCGCGCAGCTCTACCTCGCCGTGGTGTACAAGATGGAGCGCAACGACCGCGTCGCG GCGCGCCACCTCATGCAGGTGTTCGCCGACGCGCCGGGCCTCGCGCGCAGGGAGCTGCTG CCGGACCTCTGGGACCACGTGTTCCTGCCCCACCTGCTCCACCTCAAGGTCTGGTTCGCC AGGGAGGCCGACGACCTCGTCGCTGGCCGGGACGCCGACGACCGGCGCACGAGGATGAAG GCCCTGCAGAGGCTCTACAGCGACCACATGGACAGCGGCACGGCTCAGTTCGCTGTGTAC TACAAGGAGTGGCTCCAGTCAGGCGCCGCCGCGCCGCCTCCCGTCCCCTCGGTGCCGTTG CCTTCGACGCCCAGGAGTTTCGACGGGCGCGAGAAGAGCTCGGCTTCGGTGCACAGAACC TCCATCAACAGAGACCTGTGGGTGAACCGTGAACCTTCCCATCCCACAGACTGCATTGCA AGAGCACAGGAGTTTCTCAGAGTTTATCTGAATTCTGCTTCCAGGTATAATGCGGTTTTC GGGACAGCTCTCGCTCTCGGGCAGGAAGACGTCAAGGATACAAAGCTGGACGATGGGACT GGACTAGCTCTGGATTTGGATGTCGAATTGGATCACGATGCTGCGGGCTTCAAGACACAG AAGCTTGCTCATAGTAAAATGGGGCTCCAGGAAAAGCACTCCCGCTCTCGGAAAGAAGGC GCCGCTCTAGCAGAAACAGCACCTGCGCAGCGGAAATCATACTCCTTTCGACTGTTCTCG TGCCAAGGCGATATAAGCAGGAACGTGATCAGCCATCCCAAAGCAGCGAAGAAGGAACCC GTGGTGTCTGTCGAGAAAGAGCTGGACAGCAGCGAGCTAGCTCCTGCTGTCGTGCCTCTG CTGGAACGAGCGGTTTCCGTGGTATCCAGTTCGGACAGCCTGAGTCAGTGCGAGGACGCC GTGCACGAGGTCGCCAGAGCATGCTCGGCCTGGGACCCGAGCCTCGTGAACCTGCTGTCG TGCGCCTCTTTCATCCAAGGCCTTCTCGAGGTCACGCTGACCTCCAAAGACGACGCCGTG CTGGAGTCGGCCATGTCGATCATGGGGAAGCTGGTTCTGGGGAACGAGGTGATCAGACAG CTCGTGCTCAACGCGGACCCGCAGCTGGAGGTTTTCCTGAGGCTCCTGAGGAGCAGCGAG CTGTTCCTCAAGGCGGCCGTGGTGCTCTACATGATGAAGCCTAAGGCCAAGCAGATGCTG TCCCTGGACTGGGTGCCGCTCGTGCTGCACGTACTGGAGTGCGGCGACGAGGTGCAGTCT CTGTTCTCCGTAAGATGCGCCCCCAAGATCGCCGCGTTCTATTTCCTGGACCAGCTGCTC ATGGGGTTCGACGTTGACAGAAACGTCGAGAACGCGAAGCAGATGATCGCTCTCGGTGGG CTGGACCTCCTGATCGGCAGGCTTGGCGCTGGCGACGCTCGCGAGAGCAGGCACTGCATC GCTCTCCTGACCACGTGCGTTCAGGCCGATGGCAGCTGCAGGCACTACTTGGCTGATAGT CTCAAGAAGGAGCCTCTCGTTCAGCTTCTTGCTGGAAATCAGAGGAAAGCCAGTGCCGCG TCCCTTAACCTGATGAGTGAACTCGTCTGCCTTAACAGAACAAGCAAAATCGTGGAGTTC GTCAAGGAGCTGAAGAACAGCGGGTGCTTGAACACGATGCACGTTCTGCTGGTCTACCTC CAGCAGGCTCCTCTCGTCCAGCACCCGTTAGCAGCTACCATGCTACTCCAGCTCGATCTC CTGGGTGATCCTTCGCAGTACAGCGTGTACAGGGAGGAGGCGATCGAGGCCATCGTAGCC GCTCTGGAGCACAGCTCGCAGAGCAGGAAGGTCCAGGAACAGTGCGCCCGAGCTCTCCTA ATCTTGGCAGGGCGGTTCTCGTCTTCAGGAGAGCCCGTAGCAGAAGCGTGGCTGCTAAAG AGAGCGGGCCTAGACGATTCCCTCTCTGAGTCCTTCAGGAGATCAGAAGTATTCAAAGAT AAGAGTGTTCGAGCGGAGGAAGAGAAGCTAGTGGAAGAACGGCAGAAGAACCTCGCCTTG ATGCTACTGAAGAGCGGGGGCAGAAGGTTCCTCACGGCGCTGTCGAGCTGCATATCCGAT GGAACCCCGAGCCTCAGCCGGTCGTGCCTCGTCAGCGTGGCATGGATGAGCAGCTCCCTC TCGCCGCTGCGCGGATGCAACGACTTCCAGCCCCTGGCATGCTCCGTCCTCGCGTCTAAG CTTTTGGACAGCTTGAGCTACGACAGAGTCCTGGAGGAGAGGGTGCTCGCTTCGCTGTCG CTTCTGAACGTCGTGAGACACCCAGAATGCATGGAGAAGGTCTTCCCGCTGAAGAAAGAA ACCATCGAGTCACTCCAAGATCTCGCGGAGGTGACGTGGACTGCGAAGGAGCTCCTCTTT GCCTGCTGCAGATGA

Peptide Sequence

PEP ID	Zm00001d015361_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:86285396:86289986:1 gene:Zm00001d015361 transcript:Zm00001d015361_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence	MMLPPPPPPSSLRDLLSRERVDEDEAPHLSPRRASGRSPPRRGASSRSSRHTSSPPLATT TTTTREAEGEAAAADAVVAVLSAYAGRLLRDAEFRRALRDKCAACLAPAAGAGEDDDAAA GRPVLANLELGIESIERLAADGSAAQPQAPRDAKIRSLRNSIRLLSVVASLHSPPPPPRP GAAAGDGGGRTCGVPNSHLAACAQLYLAVVYKMERNDRVAARHLMQVFADAPGLARRELL PDLWDHVFLPHLLHLKVWFAREADDLVAGRDADDRRTRMKALQRLYSDHMDSGTAQFAVY YKEWLQSGAAAPPPVPSVPLPSTPRSFDGREKSSASVHRTSINRDLWVNREPSHPTDCIA RAQEFLRVYLNSASRYNAVFGTALALGQEDVKDTKLDDGTGLALDLDVELDHDAAGFKTQ KLAHSKMGLQEKHSRSRKEGAALAETAPAQRKSYSFRLFSCQGDISRNVISHPKAAKKEP VVSVEKELDSSELAPAVVPLLERAVSVVSSSDSLSQCEDAVHEVARACSAWDPSLVNLLS CASFIQGLLEVTLTSKDDAVLESAMSIMGKLVLGNEVIRQLVLNADPQLEVFLRLLRSSE LFLKAAVVLYMMKPKAKQMLSLDWVPLVLHVLECGDEVQSLFSVRCAPKIAAFYFLDQLL MGFDVDRNVENAKQMIALGGLDLLIGRLGAGDARESRHCIALLTTCVQADGSCRHYLADS LKKEPLVQLLAGNQRKASAASLNLMSELVCLNRTSKIVEFVKELKNSGCLNTMHVLLVYL QQAPLVQHPLAATMLLQLDLLGDPSQYSVYREEAIEAIVAALEHSSQSRKVQEQCARALL ILAGRFSSSGEPVAEAWLLKRAGLDDSLSESFRRSEVFKDKSVRAEEEKLVEERQKNLAL MLLKSGGRRFLTALSSCISDGTPSLSRSCLVSVAWMSSSLSPLRGCNDFQPLACSVLASK LLDSLSYDRVLEERVLASLSLLNVVRHPECMEKVFPLKKETIESLQDLAEVTWTAKELLF ACCR

Transcript Sequence

Transcript ID	Zm00001d015361_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:86285396:86289986:1 gene:Zm00001d015361 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence	GAGCTGAGAGAGGCTGGGACTGGGAGGAGCGCAGGGCGCGATTACGCGGACGCTCCAGTC TCCACCCTCCAGAGCAGACAGCAAGCGCCCAAGCGCCATGATGTTGCCGCCGCCGCCACC ACCGTCCTCCTTGCGCGACCTTCTCTCGCGGGAGCGCGTCGACGAGGACGAGGCGCCGCA TCTGTCGCCGCGACGCGCCTCCGGGCGGTCACCCCCGCGCCGCGGGGCGTCGTCGAGGTC GTCCAGGCACACGTCGTCGCCGCCGCTGGCCACGACCACGACAACGACCAGGGAGGCGGA GGGGGAGGCCGCCGCCGCCGACGCGGTGGTCGCCGTGCTGTCCGCGTACGCCGGGAGGCT GCTCAGGGACGCGGAATTCAGGCGGGCGCTCCGCGACAAGTGCGCCGCGTGCCTCGCGCC CGCCGCGGGCGCGGGCGAGGACGACGACGCGGCGGCAGGCCGCCCCGTGCTGGCCAACCT CGAGCTGGGCATCGAGAGCATAGAGCGCCTGGCCGCGGACGGCTCCGCCGCGCAGCCACA GGCGCCGCGCGACGCCAAGATCCGGTCGCTCCGCAACTCCATCCGCCTCCTCAGCGTCGT CGCGTCGCTCCACTCGCCACCGCCGCCGCCGCGCCCCGGCGCCGCCGCGGGGGACGGCGG CGGCCGCACCTGCGGGGTGCCCAACTCGCACCTCGCAGCCTGCGCGCAGCTCTACCTCGC CGTGGTGTACAAGATGGAGCGCAACGACCGCGTCGCGGCGCGCCACCTCATGCAGGTGTT CGCCGACGCGCCGGGCCTCGCGCGCAGGGAGCTGCTGCCGGACCTCTGGGACCACGTGTT CCTGCCCCACCTGCTCCACCTCAAGGTCTGGTTCGCCAGGGAGGCCGACGACCTCGTCGC TGGCCGGGACGCCGACGACCGGCGCACGAGGATGAAGGCCCTGCAGAGGCTCTACAGCGA CCACATGGACAGCGGCACGGCTCAGTTCGCTGTGTACTACAAGGAGTGGCTCCAGTCAGG CGCCGCCGCGCCGCCTCCCGTCCCCTCGGTGCCGTTGCCTTCGACGCCCAGGAGTTTCGA CGGGCGCGAGAAGAGCTCGGCTTCGGTGCACAGAACCTCCATCAACAGAGACCTGTGGGT GAACCGTGAACCTTCCCATCCCACAGACTGCATTGCAAGAGCACAGGAGTTTCTCAGAGT TTATCTGAATTCTGCTTCCAGGTATAATGCGGTTTTCGGGACAGCTCTCGCTCTCGGGCA GGAAGACGTCAAGGATACAAAGCTGGACGATGGGACTGGACTAGCTCTGGATTTGGATGT CGAATTGGATCACGATGCTGCGGGCTTCAAGACACAGAAGCTTGCTCATAGTAAAATGGG GCTCCAGGAAAAGCACTCCCGCTCTCGGAAAGAAGGCGCCGCTCTAGCAGAAACAGCACC TGCGCAGCGGAAATCATACTCCTTTCGACTGTTCTCGTGCCAAGGCGATATAAGCAGGAA CGTGATCAGCCATCCCAAAGCAGCGAAGAAGGAACCCGTGGTGTCTGTCGAGAAAGAGCT GGACAGCAGCGAGCTAGCTCCTGCTGTCGTGCCTCTGCTGGAACGAGCGGTTTCCGTGGT ATCCAGTTCGGACAGCCTGAGTCAGTGCGAGGACGCCGTGCACGAGGTCGCCAGAGCATG CTCGGCCTGGGACCCGAGCCTCGTGAACCTGCTGTCGTGCGCCTCTTTCATCCAAGGCCT TCTCGAGGTCACGCTGACCTCCAAAGACGACGCCGTGCTGGAGTCGGCCATGTCGATCAT GGGGAAGCTGGTTCTGGGGAACGAGGTGATCAGACAGCTCGTGCTCAACGCGGACCCGCA GCTGGAGGTTTTCCTGAGGCTCCTGAGGAGCAGCGAGCTGTTCCTCAAGGCGGCCGTGGT GCTCTACATGATGAAGCCTAAGGCCAAGCAGATGCTGTCCCTGGACTGGGTGCCGCTCGT GCTGCACGTACTGGAGTGCGGCGACGAGGTGCAGTCTCTGTTCTCCGTAAGATGCGCCCC CAAGATCGCCGCGTTCTATTTCCTGGACCAGCTGCTCATGGGGTTCGACGTTGACAGAAA CGTCGAGAACGCGAAGCAGATGATCGCTCTCGGTGGGCTGGACCTCCTGATCGGCAGGCT TGGCGCTGGCGACGCTCGCGAGAGCAGGCACTGCATCGCTCTCCTGACCACGTGCGTTCA GGCCGATGGCAGCTGCAGGCACTACTTGGCTGATAGTCTCAAGAAGGAGCCTCTCGTTCA GCTTCTTGCTGGAAATCAGAGGAAAGCCAGTGCCGCGTCCCTTAACCTGATGAGTGAACT CGTCTGCCTTAACAGAACAAGCAAAATCGTGGAGTTCGTCAAGGAGCTGAAGAACAGCGG GTGCTTGAACACGATGCACGTTCTGCTGGTCTACCTCCAGCAGGCTCCTCTCGTCCAGCA CCCGTTAGCAGCTACCATGCTACTCCAGCTCGATCTCCTGGGTGATCCTTCGCAGTACAG CGTGTACAGGGAGGAGGCGATCGAGGCCATCGTAGCCGCTCTGGAGCACAGCTCGCAGAG CAGGAAGGTCCAGGAACAGTGCGCCCGAGCTCTCCTAATCTTGGCAGGGCGGTTCTCGTC TTCAGGAGAGCCCGTAGCAGAAGCGTGGCTGCTAAAGAGAGCGGGCCTAGACGATTCCCT CTCTGAGTCCTTCAGGAGATCAGAAGTATTCAAAGATAAGAGTGTTCGAGCGGAGGAAGA GAAGCTAGTGGAAGAACGGCAGAAGAACCTCGCCTTGATGCTACTGAAGAGCGGGGGCAG AAGGTTCCTCACGGCGCTGTCGAGCTGCATATCCGATGGAACCCCGAGCCTCAGCCGGTC GTGCCTCGTCAGCGTGGCATGGATGAGCAGCTCCCTCTCGCCGCTGCGCGGATGCAACGA CTTCCAGCCCCTGGCATGCTCCGTCCTCGCGTCTAAGCTTTTGGACAGCTTGAGCTACGA CAGAGTCCTGGAGGAGAGGGTGCTCGCTTCGCTGTCGCTTCTGAACGTCGTGAGACACCC AGAATGCATGGAGAAGGTCTTCCCGCTGAAGAAAGAAACCATCGAGTCACTCCAAGATCT CGCGGAGGTGACGTGGACTGCGAAGGAGCTCCTCTTTGCCTGCTGCAGATGAGATGCAAG ACCAGATCGTCCTCAGCGATGAAGAACTAGACACCAGCATGTAATTGGAAGTGATTGTTT TGGGAGAAGAGTGATCGCCACTGCTGTACACAGATTGTTTCGTACTTCCGTTGATATGTG AAGCCCCACAGATCCTTTCCCTCGTCATGGACTTTGGCTTTCGCTGTTGAATTGAAGCCT GCACATGGCTTCCTTTCTTCTTCTTCTTTAGGGCTTGTTTAGATTGCCAGGTATCCATAT CAATACACATCCATGTGTTGTACGTTAACACACAACATACTATATTGAGTTGGATAATGA TCATCCAAATAAGTCCTTAGTTTTACATTATCCTATACACGTGGATTGAGTTGAATATAT AATCACCCAAATGTAAGTCCTCAGTCGTAGTTCGTTCCCGTGATAACATTTTTTTGTCTC CAGTGAAAATAAGGCCTATTGGATCTCCCATCATCAA