Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015356_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:86084655:86086755:-1 gene:Zm00001d015356 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-hydroxyphenylpyruvate dioxygenase 1 description: 4-hydroxyphenylpyruvate dioxygenase 1
Sequence	ATGCCCCCGACCCCCACAGCCGCCGCAGCCGGCGCCGCCGTGGCGGCGGCATCAGCAGCG GAGCAGGCGGCGTTCCGCCTCGTGGGCCACCGCAACTTCGTCCGCTTCAACCCGCGCTCC GACCGCTTCCACACGCTCGCGTTCCACCACGTGGAGCTCTGGTGCGCCGACGCGGCCTCC GCCGCGGGCCGCTTCTCCTTCGGCCTGGGCGCGCCGCTCGCCGCACGCTCCGACCTCTCC ACGGGCAACTCCGCGCACGCGTCCCTGCTGCTCCGCTCCGGCTCCCTCTCCTTCCTCTTC ACGGCGCCCTACGCGCACGGCGCCGACGCTGCCACCGCCGCGCTGCCCTCCTTCTCCGCC GCCGCCGCGCGGCGCTTCGCAGCCGACCACGGCCTCGCGGTGCGCGCCGTCGCGCTCCGC GTCGCCGACGCCGAGGACGCCTTCCGCGCCAGCGTCGCGGCCGGGGCGCGCCCGGCGTTC GGCCCCGTCGACCTCGGCCGCGGCTTCCGCCTCGCCGAGGTCGAGCTCTACGGCGACGTC GTGCTCCGGTACGTGAGCTACCCGGACGGCGCCGCGGGCGAGCCCTTCCTGCCGGGGTTC GAGGGCGTGGCCAGCCCCGGGGCGGCCGACTACGGGCTGAGCAGGTTCGACCACATCGTC GGCAACGTGCCGGAGCTGGCGCCCGCCGCCGCCTACTTCGCCGGCTTCACGGGGTTCCAC GAGTTCGCCGAGTTCACGACGGAGGACGTGGGCACCGCGGAGAGCGGCCTCAACTCCATG GTGCTCGCCAACAACTCGGAGAACGTGCTGCTCCCGCTCAACGAGCCGGTGCACGGCACC AAGCGCCGCAGCCAGATACAAACGTTCCTGGACCACCACGGCGGCCCCGGCGTGCAGCAC ATGGCGCTGGCCAGCGACGACGTGCTCAGGACGCTGAGGGAGATGCAGGCGCGCTCGGCC ATGGGCGGCTTCGAGTTCATGGCGCCTCCCACATCCGACTACTATGACGGCGTGAGGCGG CGCGCCGGGGACGTGCTCACGGAAGCACAGATTAAGGAGTGCCAGGAGCTAGGGGTGCTG GTGGACAGGGATGACCAGGGCGTGCTGCTCCAAATCTTCACCAAGCCAGTGGGGGACAGG CCAACGCTGTTCTTGGAAATCATCCAAAGGATCGGGTGCATGGAGAAGGATGAGAAGGGG CAAGAATACCAAAAGGGTGGCTGCGGCGGGTTCGGCAAGGGAAACTTCTCGCAGCTGTTC AAGTCCATCGAGGATTATGAGAAGTCCCTTGAAGCCAAGCAAGCTGCTGCAGCAGCTGCA GCTCAGGGATCCTAG

Peptide Sequence

PEP ID	Zm00001d015356_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:86084655:86086755:-1 gene:Zm00001d015356 transcript:Zm00001d015356_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-hydroxyphenylpyruvate dioxygenase 1 description: 4-hydroxyphenylpyruvate dioxygenase 1
Sequence	MPPTPTAAAAGAAVAAASAAEQAAFRLVGHRNFVRFNPRSDRFHTLAFHHVELWCADAAS AAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDV VLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFH EFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQH MALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVL VDRDDQGVLLQIFTKPVGDRPTLFLEIIQRIGCMEKDEKGQEYQKGGCGGFGKGNFSQLF KSIEDYEKSLEAKQAAAAAAAQGS

Transcript Sequence

Transcript ID	Zm00001d015356_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:86084655:86086755:-1 gene:Zm00001d015356 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-hydroxyphenylpyruvate dioxygenase 1 description: 4-hydroxyphenylpyruvate dioxygenase 1
Sequence	ACCAACAAGTGCAGTCACCCGAGCCGCAAACTGCAGCTCTGCAAGCTACAGAGGCCACCA CGAGTCCACGACGCCACGCCCTCCGAGAGAAAGAGAAAGAGAAAACCAAAGCACGATAAT GCCCCCGACCCCCACAGCCGCCGCAGCCGGCGCCGCCGTGGCGGCGGCATCAGCAGCGGA GCAGGCGGCGTTCCGCCTCGTGGGCCACCGCAACTTCGTCCGCTTCAACCCGCGCTCCGA CCGCTTCCACACGCTCGCGTTCCACCACGTGGAGCTCTGGTGCGCCGACGCGGCCTCCGC CGCGGGCCGCTTCTCCTTCGGCCTGGGCGCGCCGCTCGCCGCACGCTCCGACCTCTCCAC GGGCAACTCCGCGCACGCGTCCCTGCTGCTCCGCTCCGGCTCCCTCTCCTTCCTCTTCAC GGCGCCCTACGCGCACGGCGCCGACGCTGCCACCGCCGCGCTGCCCTCCTTCTCCGCCGC CGCCGCGCGGCGCTTCGCAGCCGACCACGGCCTCGCGGTGCGCGCCGTCGCGCTCCGCGT CGCCGACGCCGAGGACGCCTTCCGCGCCAGCGTCGCGGCCGGGGCGCGCCCGGCGTTCGG CCCCGTCGACCTCGGCCGCGGCTTCCGCCTCGCCGAGGTCGAGCTCTACGGCGACGTCGT GCTCCGGTACGTGAGCTACCCGGACGGCGCCGCGGGCGAGCCCTTCCTGCCGGGGTTCGA GGGCGTGGCCAGCCCCGGGGCGGCCGACTACGGGCTGAGCAGGTTCGACCACATCGTCGG CAACGTGCCGGAGCTGGCGCCCGCCGCCGCCTACTTCGCCGGCTTCACGGGGTTCCACGA GTTCGCCGAGTTCACGACGGAGGACGTGGGCACCGCGGAGAGCGGCCTCAACTCCATGGT GCTCGCCAACAACTCGGAGAACGTGCTGCTCCCGCTCAACGAGCCGGTGCACGGCACCAA GCGCCGCAGCCAGATACAAACGTTCCTGGACCACCACGGCGGCCCCGGCGTGCAGCACAT GGCGCTGGCCAGCGACGACGTGCTCAGGACGCTGAGGGAGATGCAGGCGCGCTCGGCCAT GGGCGGCTTCGAGTTCATGGCGCCTCCCACATCCGACTACTATGACGGCGTGAGGCGGCG CGCCGGGGACGTGCTCACGGAAGCACAGATTAAGGAGTGCCAGGAGCTAGGGGTGCTGGT GGACAGGGATGACCAGGGCGTGCTGCTCCAAATCTTCACCAAGCCAGTGGGGGACAGGCC AACGCTGTTCTTGGAAATCATCCAAAGGATCGGGTGCATGGAGAAGGATGAGAAGGGGCA AGAATACCAAAAGGGTGGCTGCGGCGGGTTCGGCAAGGGAAACTTCTCGCAGCTGTTCAA GTCCATCGAGGATTATGAGAAGTCCCTTGAAGCCAAGCAAGCTGCTGCAGCAGCTGCAGC TCAGGGATCCTAGGACAGTGCTTGGAGACGAGCAACTGCTGTGGCACTTTGTATCATGGA ACAGAAATAATGAAGCGTGTTCTTTGTGACACTTGACATGCAAATGTTTGTGTTCTGTAA CCGTTGAATATATGGGACGATGCTATGATGGTGTAATAGATGGTAGAGAGGGTACAACCC TGATACTAATGATGCACTATTGCATCTCTGTTGTACAAGTTTGCATGAAAATAACGACGA GGGTCAGTATGAGG