Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015342_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:85459453:85460196:1 gene:Zm00001d015342 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	ATGGAGGTAGCCGGCGTCGTCGCGTCCGCGGCCGACAGCCCTGGCGCCGCGGCGGCGCGG CCGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGC AACCACCGGCCGCCGCTGGAGCTGGCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTG CGCTACCTGGACCAGTTCGGCAAGACCAAGGTGCACGCGGCGCGGTGCCCCTTCTTCGGC CACCCGTCCCCGCCGGCGCCCTGCCCGTGCCCGCTCAAGCAGGCGTGGGGCAGCCTGGAC GCGCTCGTCGGCCGCCTGCGCGCCGCGTTCGAGGAGCACGGGGGCCGGCCCGAGGCCAAC CCCTTCGGCGCGCGCGCCGTCAGGCTTTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAG GCGCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCACCCGCCGGCGCACCGCCAG CCCAAGCAGCAGCAGCAGCAGGACGGCCAGCACCAGCACCCGTCGCACGCCGCGCCGGGC ACGGTGGCCGAGCCGCCGGCGCCGCACTTCTTGATCCCGCACGCGCACTTCCTCCATGGC CATTTCCTGGCGCCGGCGACCGAGCCCATCGACCCGGCCGCGGGCGGAGGTGGCGGCACT GGGGATGATATTGCGCTGGCAATGGCAGCCGCCGCCGAGGCGCACGCGGCCGGGTTCTTG ATGCCGCTGTCCGTGTTCAACTAG

Peptide Sequence

PEP ID	Zm00001d015342_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:85459453:85460196:1 gene:Zm00001d015342 transcript:Zm00001d015342_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	MEVAGVVASAADSPGAAAARPSRYESQKRRDWHTFGQYLRNHRPPLELARCSGAHVLEFL RYLDQFGKTKVHAARCPFFGHPSPPAPCPCPLKQAWGSLDALVGRLRAAFEEHGGRPEAN PFGARAVRLYLREVRDSQAKARGIAYEKKRRKRHPPAHRQPKQQQQQDGQHQHPSHAAPG TVAEPPAPHFLIPHAHFLHGHFLAPATEPIDPAAGGGGGTGDDIALAMAAAAEAHAAGFL MPLSVFN

Transcript Sequence

Transcript ID	Zm00001d015342_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:85459453:85460196:1 gene:Zm00001d015342 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
Sequence	ATGGAGGTAGCCGGCGTCGTCGCGTCCGCGGCCGACAGCCCTGGCGCCGCGGCGGCGCGG CCGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGC AACCACCGGCCGCCGCTGGAGCTGGCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTG CGCTACCTGGACCAGTTCGGCAAGACCAAGGTGCACGCGGCGCGGTGCCCCTTCTTCGGC CACCCGTCCCCGCCGGCGCCCTGCCCGTGCCCGCTCAAGCAGGCGTGGGGCAGCCTGGAC GCGCTCGTCGGCCGCCTGCGCGCCGCGTTCGAGGAGCACGGGGGCCGGCCCGAGGCCAAC CCCTTCGGCGCGCGCGCCGTCAGGCTTTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAG GCGCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCACCCGCCGGCGCACCGCCAG CCCAAGCAGCAGCAGCAGCAGGACGGCCAGCACCAGCACCCGTCGCACGCCGCGCCGGGC ACGGTGGCCGAGCCGCCGGCGCCGCACTTCTTGATCCCGCACGCGCACTTCCTCCATGGC CATTTCCTGGCGCCGGCGACCGAGCCCATCGACCCGGCCGCGGGCGGAGGTGGCGGCACT GGGGATGATATTGCGCTGGCAATGGCAGCCGCCGCCGAGGCGCACGCGGCCGGGTTCTTG ATGCCGCTGTCCGTGTTCAACTAG