Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d015314_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:5:84263454:84280977:-1 gene:Zm00001d015314 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH11
Sequence	ATGTCCATGGACGGCCCTGCCACCTCGCCGGCAAGCGAGGTGCCGTTCCGCATCAGCTTC TCCGGCCACAGCGGCCACCTCCGCCTCGACCCTACCCCGCACACGCCCAGCCCCATTCCG GACTTCGTCCTGCCGCCGGCATACCCGGCCGAGAGCCCGAGCAGCGTGAAGGAGTACCTC GAGAGGAACTACCTCGACCCCGAGCTGCACCTCCCCACCGCGGCCGATAGCGGGAGGGTG TGGGATGTCGACTGGTTTGCCCTGGCCAGGCCGCCGCTGGAGCCCTCCGCCCCCCGCACC ATGCTCGCGCCCGTCTGGGTGCCGCCTTTCCGGCGCGGGCAGGAGAAGTTGCAATCCGCG GCAGAGTCGCGAGTGTGGGACCCTGAGTCCGTGCAAATGGAGATGGTCGACGTGTTCGAT TCGGGGACCGGGGGGATAGCGCCCCGGATGCCTGGTCCGGCGAAGGACTTCGTCAGGGGG AGCATCAACAACAGACCTTTTCGTCCAGGCGGTCTGCAGGATGACGCCGCTGAGGCGGCT GCGCTGGAAAAGGCGTTCCCAGAGGGTGCAAGGACTGGTGATTGGGTGCGTGAGCTCATG AGCGGTGGCCCGGCGCAGGTTGCGCCTCCAGGGTTCCGTAAGGGATTGGAGCTGGGCCAG TTGAAGGGGTATGAAAGCCACTGGAAGTGTTTCCGGGATGGAGAACTTGTAGAGGAGCAA CCTGCATCATCATCGAATGACACAATGGAGAAGTACTCTGTGCAGTTTGATGATCTTTTC AAGATAGCGTGGGAGGAAGATACTGCCAACAAGTTGTTGAAGGACGGTGTTGTTCAACAA TCTGCTGAAGGTGAAGGAATCAATGAAATTGGCGAACAAAAAGTTGATGCATTGCAGGAT GAGTTCGAGAGTATAACAACGCTAGATGACGAGAAACAGGAAGTTGATGTCATAAGAAAT GTTCCTGAAACTCAAACAGACTTGGATCAGATGTTATCTTCTGAAGTACAGGATACAGGC AGGGAACCAGGTGCATCAGGTGATAAGAAGCCAACACAAGATGGCATGGTTTGGGCACTT GTTGGTGGGGACGAGGACATAGTGACTAACTTCTCCAAACTCGTTCCAGATATGGCAATC GAGTTTCCATTTGAATTGGATAAGTTCCAGAAGGAGGCTATATATTATCTCGAGAAGGGT GAATCAGTCTTTGTTGCAGCCCATACTTCAGCTGGAAAGACGGTTGTTGCTGAGTATGCA TTCGCATTAGCAACGAAACATTGCACTAGGTCTGTCTATACTGCTCCTATTAAAACTATC AGCAACCAGAAATACAGAGATTTTTCTGGGAAGTTTGATGTGGGACTTCTGACAGGAGAT GTTAGCATCAGGCCAGAGGCAACTTGCTTAATTATGACTACTGAGATATTGCGTTCAATG CTCTACAGAGGCGCAGACATTATACGTGATATTGAATGGGTAATCTTTGATGAAGTGCAT TATGTAAATGATGCTGAAAGAGGTGTAGTCTGGGAGGAGGTCATTATAATGCTCCCGAAG CACATTAACATTGTTCTTCTTTCGGCAACGGTCCCAAATACTGTTGAATTTGCTGACTGG ATTGGTCGGACAAAGCAGAAGAAAATTCGTGTCACATCTGAGCGGTATATGGAATCTACC TTGCTAGAAAAGTACTGCTTATATCATGTGGTGATTTTTTGTTTCTCAAAGAATCGCTGT GATAAATCGGCAGATAGTATGTTTGGCACTGATCTCACCAGTAGTTCAGAGAAAAGTGAA ATACGTGTCTTCTGTGACAAGGCATTTTCACGTCTTAAAGGATCTGATAGGAACCTTCCA CAGGTTGTAGGAATACAAAGCCTTCTGCGAAGAGGAATTGGAGTACACCACGCTGGGCTT CTCCCTATTGTGAAGGAAGTTGTTGAGATGCTGTTTTGCCGTGGTGTAATCAAGGTACTG TTTTCCACTGAGACATTTGCAATGGGTGTCAATGCACCGGCAAGAACGGTTGTGTTTGAT TCTTTAAGAAAGTTTGATGGAAAAGAACACCGGAAATTGCTTCCAGGGGAATATATACAA ATGGCTGGGCGAGCTGGTCGGAGAGGACTTGATAACATTGGTACTGTGATCATTATGTGT CGTGATGAAATTCCTGAAGAAAGCGATTTGAAAAATTTGATCGTTGGAAAACCAACTCGT TTGGAATCTCAATTTCGATTAACATACACCATGATACTACATCTTCTGCGTGTGGAGGAA CTGAAGGTCGAGGACATGCTCAAGAGAAGTTTTGCTGAATTCCACGCACAAAAGAATTTG CCTGAGAAGGAAAAGCTTCTTCTGCAAATGCTTCGTCAACCTACAAGGACAATAGAGTGC ATAAAAGGAGAGCCTTCTATTGAGGAATACTACGAGATGACTTTAGATGCTGAGGCACAC AGGGAATACATAACAGAAGCAATTATGCAGCTGCCTAATTCTCAACAGTTTCTTACGCCT GGGAGATTGGTGGTTGTTAAATCTGATTCTGATGATGATCACTTGCTTGGTGTTATACTG AAAAATCCATCTGCATTGCTAAAGAAATATGTTGTTCTGGTATTGACTGGTGATTGCAGT TCATCTGCACTAGCCCCTGAGTTCAATAAAAATGAAAAGGGTCCTGTGGATTTTCAAGGA GGACAATTTATTGTCCTGAAAGGAAAACGTGGCATGGACGATGAATATTTCTCTTCTGTT AGTTCACGAAAAGCTTCAGGTGTAATCAATATCAATCTACCATACAAGGGGGATGCATCT GGAATGGGCTTTGAAGTAAGAGCAATTGAGAATAAAGAAATCATTAGTATATGCAGCAGC AAAATAAAGATTGATCAAGTCAGACTTCTTGAGGAGCCTAACAAAACTGCATACTCTAGA ACTGTCCAACAGCTTATAAAGGAGCAACCAGATGGAACCAAGTATCCTCCTGCTTTAGAT GCAATAAAAGATCTAAAAATGAAAGACATGTATCTTGTTGAAAGTTACCGTGCATATCAC ATACTACTGCAAAAAATGTCTGAAAACAAGTGCCATGGTTGTATAAAACTGAAGGAGCAT ATATCATTGATGAGGGAGCAAAAGATGTACAAGGATCAGTTGAATGAATTGAAATTCCAA ATGTCCGACGAGGCACTTCAACAAATGCCAGAGTTTCAAGGCAGAATTGATGTACTAAAG GTAATCCACTACATTGATTCTGATCTAGTTGTGCAACTTAAGGGTCGGGTAGCATGTGAA ATGAACTCCGGTGAGGAGTTAATATCAACAGAATGTCTGTTTGAAAATCAATTGGATGAC CTAGAACCCGAAGAAGCTGTGGCTATTATGTCTGCATTCGTCTTCCAACAACGCAATGCT TCAGAACCATCTCTTACTCCAAAACTGGCTGAAGCGAAGAAGAGGCTCTATGATACAGCC ATAAAATTAGGGAAGCTCCAATCCGAGTTCAAGGTGCCTGTGGACCCTGAAGAGTATGCA CGTGATAATCTCAAGTTTGGCCTTGTTGAGGTCGTCTACGAGTGGGCAAAGGGGACGCCT TTCGCAGACATATGCGAGCTGACTGATGTATCCGAAGGGATCATTGTAAGAACAATCGTC CGTCTGGACGAAACATGTAGGGAATTCAGGAATGCAGCTTCCATCATGGGGAACTCTGCG CTGTTCAAGAAGATGGAGGTCGCGTCTAACGCTATTAAGCGTGACATTGTGTTTGCAGCA AGTTTGTATGTCACAGGAATCTGA

Peptide Sequence

PEP ID	Zm00001d015314_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:5:84263454:84280977:-1 gene:Zm00001d015314 transcript:Zm00001d015314_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH11
Sequence	MSMDGPATSPASEVPFRISFSGHSGHLRLDPTPHTPSPIPDFVLPPAYPAESPSSVKEYL ERNYLDPELHLPTAADSGRVWDVDWFALARPPLEPSAPRTMLAPVWVPPFRRGQEKLQSA AESRVWDPESVQMEMVDVFDSGTGGIAPRMPGPAKDFVRGSINNRPFRPGGLQDDAAEAA ALEKAFPEGARTGDWVRELMSGGPAQVAPPGFRKGLELGQLKGYESHWKCFRDGELVEEQ PASSSNDTMEKYSVQFDDLFKIAWEEDTANKLLKDGVVQQSAEGEGINEIGEQKVDALQD EFESITTLDDEKQEVDVIRNVPETQTDLDQMLSSEVQDTGREPGASGDKKPTQDGMVWAL VGGDEDIVTNFSKLVPDMAIEFPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYA FALATKHCTRSVYTAPIKTISNQKYRDFSGKFDVGLLTGDVSIRPEATCLIMTTEILRSM LYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADW IGRTKQKKIRVTSERYMESTLLEKYCLYHVVIFCFSKNRCDKSADSMFGTDLTSSSEKSE IRVFCDKAFSRLKGSDRNLPQVVGIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVL FSTETFAMGVNAPARTVVFDSLRKFDGKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIIMC RDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHLLRVEELKVEDMLKRSFAEFHAQKNL PEKEKLLLQMLRQPTRTIECIKGEPSIEEYYEMTLDAEAHREYITEAIMQLPNSQQFLTP GRLVVVKSDSDDDHLLGVILKNPSALLKKYVVLVLTGDCSSSALAPEFNKNEKGPVDFQG GQFIVLKGKRGMDDEYFSSVSSRKASGVININLPYKGDASGMGFEVRAIENKEIISICSS KIKIDQVRLLEEPNKTAYSRTVQQLIKEQPDGTKYPPALDAIKDLKMKDMYLVESYRAYH ILLQKMSENKCHGCIKLKEHISLMREQKMYKDQLNELKFQMSDEALQQMPEFQGRIDVLK VIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSAFVFQQRNA SEPSLTPKLAEAKKRLYDTAIKLGKLQSEFKVPVDPEEYARDNLKFGLVEVVYEWAKGTP FADICELTDVSEGIIVRTIVRLDETCREFRNAASIMGNSALFKKMEVASNAIKRDIVFAA SLYVTGI

Transcript Sequence

Transcript ID	Zm00001d015314_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:84263454:84280977:-1 gene:Zm00001d015314 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH11
Sequence	AGGCCGAACCAGTTCCGACGAAACGGTACGGTGACGGCTCACCTCGGGGGTCTCCATGTC CATGGACGGCCCTGCCACCTCGCCGGCAAGCGAGGTGCCGTTCCGCATCAGCTTCTCCGG CCACAGCGGCCACCTCCGCCTCGACCCTACCCCGCACACGCCCAGCCCCATTCCGGACTT CGTCCTGCCGCCGGCATACCCGGCCGAGAGCCCGAGCAGCGTGAAGGAGTACCTCGAGAG GAACTACCTCGACCCCGAGCTGCACCTCCCCACCGCGGCCGATAGCGGGAGGGTGTGGGA TGTCGACTGGTTTGCCCTGGCCAGGCCGCCGCTGGAGCCCTCCGCCCCCCGCACCATGCT CGCGCCCGTCTGGGTGCCGCCTTTCCGGCGCGGGCAGGAGAAGTTGCAATCCGCGGCAGA GTCGCGAGTGTGGGACCCTGAGTCCGTGCAAATGGAGATGGTCGACGTGTTCGATTCGGG GACCGGGGGGATAGCGCCCCGGATGCCTGGTCCGGCGAAGGACTTCGTCAGGGGGAGCAT CAACAACAGACCTTTTCGTCCAGGCGGTCTGCAGGATGACGCCGCTGAGGCGGCTGCGCT GGAAAAGGCGTTCCCAGAGGGTGCAAGGACTGGTGATTGGGTGCGTGAGCTCATGAGCGG TGGCCCGGCGCAGGTTGCGCCTCCAGGGTTCCGTAAGGGATTGGAGCTGGGCCAGTTGAA GGGGTATGAAAGCCACTGGAAGTGTTTCCGGGATGGAGAACTTGTAGAGGAGCAACCTGC ATCATCATCGAATGACACAATGGAGAAGTACTCTGTGCAGTTTGATGATCTTTTCAAGAT AGCGTGGGAGGAAGATACTGCCAACAAGTTGTTGAAGGACGGTGTTGTTCAACAATCTGC TGAAGGTGAAGGAATCAATGAAATTGGCGAACAAAAAGTTGATGCATTGCAGGATGAGTT CGAGAGTATAACAACGCTAGATGACGAGAAACAGGAAGTTGATGTCATAAGAAATGTTCC TGAAACTCAAACAGACTTGGATCAGATGTTATCTTCTGAAGTACAGGATACAGGCAGGGA ACCAGGTGCATCAGGTGATAAGAAGCCAACACAAGATGGCATGGTTTGGGCACTTGTTGG TGGGGACGAGGACATAGTGACTAACTTCTCCAAACTCGTTCCAGATATGGCAATCGAGTT TCCATTTGAATTGGATAAGTTCCAGAAGGAGGCTATATATTATCTCGAGAAGGGTGAATC AGTCTTTGTTGCAGCCCATACTTCAGCTGGAAAGACGGTTGTTGCTGAGTATGCATTCGC ATTAGCAACGAAACATTGCACTAGGTCTGTCTATACTGCTCCTATTAAAACTATCAGCAA CCAGAAATACAGAGATTTTTCTGGGAAGTTTGATGTGGGACTTCTGACAGGAGATGTTAG CATCAGGCCAGAGGCAACTTGCTTAATTATGACTACTGAGATATTGCGTTCAATGCTCTA CAGAGGCGCAGACATTATACGTGATATTGAATGGGTAATCTTTGATGAAGTGCATTATGT AAATGATGCTGAAAGAGGTGTAGTCTGGGAGGAGGTCATTATAATGCTCCCGAAGCACAT TAACATTGTTCTTCTTTCGGCAACGGTCCCAAATACTGTTGAATTTGCTGACTGGATTGG TCGGACAAAGCAGAAGAAAATTCGTGTCACATCTGAGCGGTATATGGAATCTACCTTGCT AGAAAAGTACTGCTTATATCATGTGGTGATTTTTTGTTTCTCAAAGAATCGCTGTGATAA ATCGGCAGATAGTATGTTTGGCACTGATCTCACCAGTAGTTCAGAGAAAAGTGAAATACG TGTCTTCTGTGACAAGGCATTTTCACGTCTTAAAGGATCTGATAGGAACCTTCCACAGGT TGTAGGAATACAAAGCCTTCTGCGAAGAGGAATTGGAGTACACCACGCTGGGCTTCTCCC TATTGTGAAGGAAGTTGTTGAGATGCTGTTTTGCCGTGGTGTAATCAAGGTACTGTTTTC CACTGAGACATTTGCAATGGGTGTCAATGCACCGGCAAGAACGGTTGTGTTTGATTCTTT AAGAAAGTTTGATGGAAAAGAACACCGGAAATTGCTTCCAGGGGAATATATACAAATGGC TGGGCGAGCTGGTCGGAGAGGACTTGATAACATTGGTACTGTGATCATTATGTGTCGTGA TGAAATTCCTGAAGAAAGCGATTTGAAAAATTTGATCGTTGGAAAACCAACTCGTTTGGA ATCTCAATTTCGATTAACATACACCATGATACTACATCTTCTGCGTGTGGAGGAACTGAA GGTCGAGGACATGCTCAAGAGAAGTTTTGCTGAATTCCACGCACAAAAGAATTTGCCTGA GAAGGAAAAGCTTCTTCTGCAAATGCTTCGTCAACCTACAAGGACAATAGAGTGCATAAA AGGAGAGCCTTCTATTGAGGAATACTACGAGATGACTTTAGATGCTGAGGCACACAGGGA ATACATAACAGAAGCAATTATGCAGCTGCCTAATTCTCAACAGTTTCTTACGCCTGGGAG ATTGGTGGTTGTTAAATCTGATTCTGATGATGATCACTTGCTTGGTGTTATACTGAAAAA TCCATCTGCATTGCTAAAGAAATATGTTGTTCTGGTATTGACTGGTGATTGCAGTTCATC TGCACTAGCCCCTGAGTTCAATAAAAATGAAAAGGGTCCTGTGGATTTTCAAGGAGGACA ATTTATTGTCCTGAAAGGAAAACGTGGCATGGACGATGAATATTTCTCTTCTGTTAGTTC ACGAAAAGCTTCAGGTGTAATCAATATCAATCTACCATACAAGGGGGATGCATCTGGAAT GGGCTTTGAAGTAAGAGCAATTGAGAATAAAGAAATCATTAGTATATGCAGCAGCAAAAT AAAGATTGATCAAGTCAGACTTCTTGAGGAGCCTAACAAAACTGCATACTCTAGAACTGT CCAACAGCTTATAAAGGAGCAACCAGATGGAACCAAGTATCCTCCTGCTTTAGATGCAAT AAAAGATCTAAAAATGAAAGACATGTATCTTGTTGAAAGTTACCGTGCATATCACATACT ACTGCAAAAAATGTCTGAAAACAAGTGCCATGGTTGTATAAAACTGAAGGAGCATATATC ATTGATGAGGGAGCAAAAGATGTACAAGGATCAGTTGAATGAATTGAAATTCCAAATGTC CGACGAGGCACTTCAACAAATGCCAGAGTTTCAAGGCAGAATTGATGTACTAAAGGTAAT CCACTACATTGATTCTGATCTAGTTGTGCAACTTAAGGGTCGGGTAGCATGTGAAATGAA CTCCGGTGAGGAGTTAATATCAACAGAATGTCTGTTTGAAAATCAATTGGATGACCTAGA ACCCGAAGAAGCTGTGGCTATTATGTCTGCATTCGTCTTCCAACAACGCAATGCTTCAGA ACCATCTCTTACTCCAAAACTGGCTGAAGCGAAGAAGAGGCTCTATGATACAGCCATAAA ATTAGGGAAGCTCCAATCCGAGTTCAAGGTGCCTGTGGACCCTGAAGAGTATGCACGTGA TAATCTCAAGTTTGGCCTTGTTGAGGTCGTCTACGAGTGGGCAAAGGGGACGCCTTTCGC AGACATATGCGAGCTGACTGATGTATCCGAAGGGATCATTGTAAGAACAATCGTCCGTCT GGACGAAACATGTAGGGAATTCAGGAATGCAGCTTCCATCATGGGGAACTCTGCGCTGTT CAAGAAGATGGAGGTCGCGTCTAACGCTATTAAGCGTGACATTGTGTTTGCAGCAAGTTT GTATGTCACAGGAATCTGATGCATGTAACCTCGTAGTCTCCCTTGCTTCTTTTGTTAGAG AAATCGTTGTGCTGGTGGAATGCTACTAACCTAACCTTAGCTAGAACAATTGTTGTG